Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3702
Gene name
Locationscaffold_291:23809..24987
Strand+
Gene length (bp)1178
Transcript length (bp)1053
Coding sequence length (bp)1050
Protein length (aa) 350

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01266 DAO FAD dependent oxidoreductase 1.1E-24 6 344

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P24552|OXDA_FUSSO D-amino-acid oxidase OS=Fusarium solani subsp. pisi PE=1 SV=1 3 344 4.0E-25
sp|Q9Y7N4|OXDA_SCHPO D-amino-acid oxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dao1 PE=3 SV=1 6 350 1.0E-24
sp|P80324|OXDA_RHOTO D-amino-acid oxidase OS=Rhodosporidium toruloides GN=DAO1 PE=1 SV=1 6 344 1.0E-22
sp|Q99042|OXDA_TRIVR D-amino-acid oxidase OS=Trigonopsis variabilis GN=DAO1 PE=3 SV=1 6 340 5.0E-20
sp|Q556W1|OXDD_DICDI D-aspartate oxidase OS=Dictyostelium discoideum GN=ddo-1 PE=3 SV=1 6 345 9.0E-18
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Swissprot ID Swissprot Description Start End E-value
sp|P24552|OXDA_FUSSO D-amino-acid oxidase OS=Fusarium solani subsp. pisi PE=1 SV=1 3 344 4.0E-25
sp|Q9Y7N4|OXDA_SCHPO D-amino-acid oxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dao1 PE=3 SV=1 6 350 1.0E-24
sp|P80324|OXDA_RHOTO D-amino-acid oxidase OS=Rhodosporidium toruloides GN=DAO1 PE=1 SV=1 6 344 1.0E-22
sp|Q99042|OXDA_TRIVR D-amino-acid oxidase OS=Trigonopsis variabilis GN=DAO1 PE=3 SV=1 6 340 5.0E-20
sp|Q556W1|OXDD_DICDI D-aspartate oxidase OS=Dictyostelium discoideum GN=ddo-1 PE=3 SV=1 6 345 9.0E-18
sp|A8XJ44|OXDA_CAEBR D-amino-acid oxidase OS=Caenorhabditis briggsae GN=daao-1 PE=3 SV=1 4 349 8.0E-17
sp|P31228|OXDD_BOVIN D-aspartate oxidase OS=Bos taurus GN=DDO PE=1 SV=2 1 345 3.0E-16
sp|Q99489|OXDD_HUMAN D-aspartate oxidase OS=Homo sapiens GN=DDO PE=2 SV=1 1 344 2.0E-12
sp|Q922Z0|OXDD_MOUSE D-aspartate oxidase OS=Mus musculus GN=Ddo PE=1 SV=1 1 346 2.0E-12
sp|Q95XG9|OXDA_CAEEL D-amino-acid oxidase OS=Caenorhabditis elegans GN=daao-1 PE=1 SV=2 4 350 2.0E-11
sp|P9WP27|DAO_MYCTU Probable D-amino-acid oxidase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=aao PE=1 SV=1 6 344 3.0E-10
sp|P9WP26|DAO_MYCTO Probable D-amino-acid oxidase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=aao PE=3 SV=1 6 344 3.0E-10
sp|P22942|OXDA_RABIT D-amino-acid oxidase OS=Oryctolagus cuniculus GN=DAO PE=2 SV=1 6 344 1.0E-08
sp|P00371|OXDA_PIG D-amino-acid oxidase OS=Sus scrofa GN=DAO PE=1 SV=2 6 344 1.0E-08
sp|A8WXM1|OXDD1_CAEBR D-aspartate oxidase 1 OS=Caenorhabditis briggsae GN=CBG04460 PE=3 SV=1 200 349 2.0E-08
sp|Q19564|OXDD2_CAEEL D-aspartate oxidase 2 OS=Caenorhabditis elegans GN=ddo-2 PE=1 SV=1 200 344 7.0E-08
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3702
MASPTIVIIGAGVFGLSCAVNLQAKLAEEDALVRHELVVVACEWPSPTIPGLSSPSVNYASMWAGAHVRPIPATT
PQLQREAKWLKHTVAEFERQMEAEPFCGITRTGGIEYMEEPSAGYSNQDSSTFEQESGLRGYGQIAGCELPEGVA
LGFRYETFCINPSVYCEHLLRKFLLRGGKAKTRHLSSEWDPYSALDQVVLVINASGFGFGDPQCFPTRGQTVLTD
LSVAYTITRQHRDGTKSFLVPRSFCGGTVVGGTTEVRDWRDAPDAATRDRLLASGLAMAGSHGQVKVVGDIVGRR
PTRTDGLRLDVEERSRTERVIHAYGAGGRGYEMSWGVANEVTQLAIPLLR
Coding >Ophio5|3702
ATGGCATCACCAACCATCGTCATCATTGGAGCTGGAGTCTTTGGACTGTCGTGTGCCGTCAATCTCCAGGCCAAG
CTCGCAGAGGAAGATGCCCTTGTCCGGCATGAGTTGGTGGTCGTTGCTTGCGAATGGCCATCACCGACTATTCCC
GGTCTATCGTCGCCATCGGTAAACTATGCCTCCATGTGGGCTGGGGCTCACGTTAGACCGATTCCCGCTACTACG
CCCCAGCTACAGCGCGAGGCCAAGTGGCTCAAGCACACGGTGGCCGAGTTCGAGCGCCAGATGGAAGCCGAGCCG
TTTTGCGGAATCACACGGACTGGTGGTATCGAGTACATGGAAGAGCCCTCGGCAGGCTATTCGAATCAAGACTCG
TCCACGTTTGAGCAGGAATCGGGCCTGCGAGGGTACGGCCAAATTGCAGGCTGCGAGCTTCCCGAAGGCGTAGCG
CTAGGCTTCCGCTACGAGACATTTTGTATCAACCCCTCGGTCTACTGTGAGCATCTGCTTCGCAAGTTTCTGCTC
AGGGGAGGAAAGGCGAAGACAAGGCATCTGTCCAGCGAGTGGGATCCCTATTCGGCGCTGGATCAAGTGGTGCTT
GTGATCAACGCGAGTGGCTTTGGCTTTGGCGACCCCCAATGCTTCCCAACCAGAGGTCAGACTGTGCTCACGGAT
CTCTCCGTGGCCTACACAATCACCAGACAACACAGAGACGGGACCAAAAGCTTCCTCGTGCCGCGGTCCTTTTGC
GGAGGAACGGTGGTGGGCGGGACCACAGAAGTCAGAGACTGGCGAGACGCCCCTGACGCGGCGACTAGAGACCGT
CTCCTGGCTTCCGGACTGGCCATGGCAGGCAGCCACGGACAGGTCAAAGTCGTTGGGGATATTGTCGGTCGCAGG
CCCACTCGTACAGACGGATTGAGATTGGATGTCGAGGAGAGGAGCAGGACGGAACGGGTAATACACGCCTACGGT
GCCGGGGGACGTGGCTATGAGATGAGTTGGGGGGTGGCTAACGAGGTGACGCAGCTGGCCATTCCATTGCTTCGT
Transcript >Ophio5|3702
ATGGCATCACCAACCATCGTCATCATTGGAGCTGGAGTCTTTGGACTGTCGTGTGCCGTCAATCTCCAGGCCAAG
CTCGCAGAGGAAGATGCCCTTGTCCGGCATGAGTTGGTGGTCGTTGCTTGCGAATGGCCATCACCGACTATTCCC
GGTCTATCGTCGCCATCGGTAAACTATGCCTCCATGTGGGCTGGGGCTCACGTTAGACCGATTCCCGCTACTACG
CCCCAGCTACAGCGCGAGGCCAAGTGGCTCAAGCACACGGTGGCCGAGTTCGAGCGCCAGATGGAAGCCGAGCCG
TTTTGCGGAATCACACGGACTGGTGGTATCGAGTACATGGAAGAGCCCTCGGCAGGCTATTCGAATCAAGACTCG
TCCACGTTTGAGCAGGAATCGGGCCTGCGAGGGTACGGCCAAATTGCAGGCTGCGAGCTTCCCGAAGGCGTAGCG
CTAGGCTTCCGCTACGAGACATTTTGTATCAACCCCTCGGTCTACTGTGAGCATCTGCTTCGCAAGTTTCTGCTC
AGGGGAGGAAAGGCGAAGACAAGGCATCTGTCCAGCGAGTGGGATCCCTATTCGGCGCTGGATCAAGTGGTGCTT
GTGATCAACGCGAGTGGCTTTGGCTTTGGCGACCCCCAATGCTTCCCAACCAGAGGTCAGACTGTGCTCACGGAT
CTCTCCGTGGCCTACACAATCACCAGACAACACAGAGACGGGACCAAAAGCTTCCTCGTGCCGCGGTCCTTTTGC
GGAGGAACGGTGGTGGGCGGGACCACAGAAGTCAGAGACTGGCGAGACGCCCCTGACGCGGCGACTAGAGACCGT
CTCCTGGCTTCCGGACTGGCCATGGCAGGCAGCCACGGACAGGTCAAAGTCGTTGGGGATATTGTCGGTCGCAGG
CCCACTCGTACAGACGGATTGAGATTGGATGTCGAGGAGAGGAGCAGGACGGAACGGGTAATACACGCCTACGGT
GCCGGGGGACGTGGCTATGAGATGAGTTGGGGGGTGGCTAACGAGGTGACGCAGCTGGCCATTCCATTGCTTCGT
TGA
Gene >Ophio5|3702
ATGGCATCACCAACCATCGTCATCATTGGGTGAGCAAAACACAAGTCTGATGAAAACGGCCTCGAGCTAAGCACC
GACATCATCAGAGCTGGAGTCTTTGGACTGTCGTGTGCCGTCAATCTCCAGGCCAAGCTCGCAGAGGAAGATGCC
CTTGTCCGGCATGAGTTGGTGGTCGTTGCTTGCGAATGGCCATCACCGACTATTCCCGGTCTATCGTCGCCATCG
GTAAACTATGCCTCCATGTGGGCTGGGGCTCACGTTAGACCGATTCCCGCTACTACGCCCCAGCTACAGCGCGAG
GCCAAGTGGCTCAAGCACACGGTGGCCGAGTTCGAGCGCCAGATGGAAGCCGAGCCGTTTTGCGGAATCACACGG
ACTGGTGGTATCGAGTACATGGAAGAGCCCTCGGCAGGCTATTCGAATCAAGACTCGTCCACGTTTGAGCAGGAA
TCGGGCCTGCGAGGGTACGGCCAAATTGCAGGCTGCGAGCTTCCCGAAGGCGTAGCGCTAGGCTTCCGCTACGAG
ACATTTTGTATCAACCCCTCGGTCTACTGTGAGCATCTGCTTCGCAAGTTTCTGCTCAGGGGAGGAAAGGCGAAG
ACAAGGCATCTGTCCAGCGAGTGGGATCCCTATTCGGCGCTGGATCAAGTGGTGCTTGTGATCAACGCGAGTGGC
TTTGGCTTTGGCGACCCCCAATGCTTCCCAACCAGAGGTTTGAACTTTGCATGCCATGGCACAATGCTTTGCTTC
TTGGCCAAAGGCTGACGACGCGAATGGCAGGTCAGACTGTGCTCACGGATCTCTCCGTGGCCTACACAATCACCA
GACAACACAGAGACGGGACCAAAAGCTTCCTCGTGCCGCGGTCCTTTTGCGGAGGAACGGTGGTGGGCGGGACCA
CAGAAGTCAGAGACTGGCGAGACGCCCCTGACGCGGCGACTAGAGACCGTCTCCTGGCTTCCGGACTGGCCATGG
CAGGCAGCCACGGACAGGTCAAAGTCGTTGGGGATATTGTCGGTCGCAGGCCCACTCGTACAGACGGATTGAGAT
TGGATGTCGAGGAGAGGAGCAGGACGGAACGGGTAATACACGCCTACGGTGCCGGGGGACGTGGCTATGAGATGA
GTTGGGGGGTGGCTAACGAGGTGACGCAGCTGGCCATTCCATTGCTTCGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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