Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3678
Gene name
Locationscaffold_29:71833..73767
Strand+
Gene length (bp)1934
Transcript length (bp)1758
Coding sequence length (bp)1755
Protein length (aa) 585

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00728 Glyco_hydro_20 Glycosyl hydrolase family 20, catalytic domain 6.5E-89 192 533
PF14845 Glycohydro_20b2 beta-acetyl hexosaminidase like 1.8E-26 20 165

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D4AUH6|HEX1_ARTBC Beta-hexosaminidase ARB_07893 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07893 PE=1 SV=1 19 573 1.0E-139
sp|Q9SYK0|HEXO2_ARATH Beta-hexosaminidase 2 OS=Arabidopsis thaliana GN=HEXO2 PE=1 SV=1 93 575 4.0E-83
sp|Q8WSF3|FDL_DROME Probable beta-hexosaminidase fdl OS=Drosophila melanogaster GN=fdl PE=1 SV=1 94 581 3.0E-66
sp|P49010|HEXC_BOMMO Chitooligosaccharidolytic beta-N-acetylglucosaminidase OS=Bombyx mori PE=1 SV=1 131 575 3.0E-65
sp|P43077|HEX1_CANAX Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1 131 573 7.0E-65
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Swissprot ID Swissprot Description Start End E-value
sp|D4AUH6|HEX1_ARTBC Beta-hexosaminidase ARB_07893 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07893 PE=1 SV=1 19 573 1.0E-139
sp|Q9SYK0|HEXO2_ARATH Beta-hexosaminidase 2 OS=Arabidopsis thaliana GN=HEXO2 PE=1 SV=1 93 575 4.0E-83
sp|Q8WSF3|FDL_DROME Probable beta-hexosaminidase fdl OS=Drosophila melanogaster GN=fdl PE=1 SV=1 94 581 3.0E-66
sp|P49010|HEXC_BOMMO Chitooligosaccharidolytic beta-N-acetylglucosaminidase OS=Bombyx mori PE=1 SV=1 131 575 3.0E-65
sp|P43077|HEX1_CANAX Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1 131 573 7.0E-65
sp|E9DFH0|HEX1_COCPS Beta-hexosaminidase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) GN=HEX1 PE=1 SV=1 101 575 1.0E-61
sp|D4AYT4|HEX2_ARTBC Probable beta-hexosaminidase ARB_01353 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01353 PE=1 SV=1 128 575 5.0E-61
sp|Q6AXR4|HEXB_RAT Beta-hexosaminidase subunit beta OS=Rattus norvegicus GN=Hexb PE=2 SV=1 1 580 1.0E-57
sp|P20060|HEXB_MOUSE Beta-hexosaminidase subunit beta OS=Mus musculus GN=Hexb PE=1 SV=2 5 578 2.0E-55
sp|A7WM73|HEXO1_ARATH Beta-hexosaminidase 1 OS=Arabidopsis thaliana GN=HEXO1 PE=1 SV=1 20 575 9.0E-54
sp|P49614|HEXB_FELCA Beta-hexosaminidase subunit beta OS=Felis catus GN=HEXB PE=2 SV=2 19 573 2.0E-53
sp|P07686|HEXB_HUMAN Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3 19 577 6.0E-52
sp|P13723|HEXA1_DICDI Beta-hexosaminidase subunit A1 OS=Dictyostelium discoideum GN=hexa1 PE=1 SV=1 91 573 2.0E-50
sp|Q54K55|HEXB1_DICDI Beta-hexosaminidase subunit B1 OS=Dictyostelium discoideum GN=hexb1 PE=3 SV=1 64 569 3.0E-50
sp|Q54K56|HEXB2_DICDI Beta-hexosaminidase subunit B2 OS=Dictyostelium discoideum GN=hexb2 PE=3 SV=1 20 568 5.0E-48
sp|Q8L7S6|HEXO3_ARATH Beta-hexosaminidase 3 OS=Arabidopsis thaliana GN=HEXO3 PE=1 SV=1 20 568 5.0E-45
sp|Q29548|HEXB_PIG Beta-hexosaminidase subunit beta OS=Sus scrofa GN=HEXB PE=1 SV=2 130 578 9.0E-45
sp|Q0V8R6|HEXA_BOVIN Beta-hexosaminidase subunit alpha OS=Bos taurus GN=HEXA PE=2 SV=1 126 573 3.0E-43
sp|Q5RC84|HEXA_PONAB Beta-hexosaminidase subunit alpha OS=Pongo abelii GN=HEXA PE=3 SV=1 126 575 7.0E-42
sp|P06865|HEXA_HUMAN Beta-hexosaminidase subunit alpha OS=Homo sapiens GN=HEXA PE=1 SV=2 126 575 8.0E-42
sp|Q54SC9|HEXA2_DICDI Beta-hexosaminidase subunit A2 OS=Dictyostelium discoideum GN=hexa2 PE=3 SV=1 131 574 6.0E-41
sp|P29416|HEXA_MOUSE Beta-hexosaminidase subunit alpha OS=Mus musculus GN=Hexa PE=1 SV=2 133 575 8.0E-41
sp|Q86M34|HEXB_ENTHI Beta-hexosaminidase subunit beta OS=Entamoeba histolytica GN=HEXB PE=1 SV=1 93 532 2.0E-40
sp|Q641X3|HEXA_RAT Beta-hexosaminidase subunit alpha OS=Rattus norvegicus GN=Hexa PE=2 SV=1 133 575 1.0E-39
sp|Q22492|HEXA_CAEEL Beta-hexosaminidase A OS=Caenorhabditis elegans GN=hex-1 PE=1 SV=1 126 567 8.0E-39
sp|Q619W7|HEXA_CAEBR Beta-hexosaminidase A OS=Caenorhabditis briggsae GN=hex-1 PE=3 SV=2 126 567 5.0E-37
sp|P49009|HEXA_ENTHI Beta-hexosaminidase subunit alpha OS=Entamoeba histolytica GN=HEXA PE=1 SV=2 132 532 2.0E-32
sp|P96155|HEX1_VIBFU Beta-hexosaminidase OS=Vibrio furnissii GN=exo I PE=1 SV=1 184 525 3.0E-28
sp|P49008|HEXA_PORGI Beta-hexosaminidase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=nahA PE=3 SV=2 132 551 5.0E-28
sp|Q7WUL4|HEX20_CELFI Beta-N-acetylhexosaminidase OS=Cellulomonas fimi GN=hex20 PE=1 SV=1 132 536 8.0E-28
sp|P13670|CHB_VIBHA N,N'-diacetylchitobiase OS=Vibrio harveyi GN=chb PE=1 SV=1 134 286 2.0E-20
sp|Q54468|CHB_SERMA Chitobiase OS=Serratia marcescens GN=chb PE=1 SV=1 128 328 7.0E-20
sp|Q04786|HEX_VIBVL Beta-hexosaminidase OS=Vibrio vulnificus GN=hex PE=3 SV=1 134 286 2.0E-16
sp|P49007|HEXB_PSEO7 Beta-hexosaminidase B OS=Pseudoalteromonas piscicida GN=nag096 PE=3 SV=1 135 531 3.0E-12
sp|H2A0L6|HEX_PINMG Putative beta-hexosaminidase OS=Pinctada margaritifera PE=1 SV=1 130 240 5.0E-07
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GO

GO Term Description Terminal node
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0016787 hydrolase activity No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0003824 catalytic activity No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3678
MSHMIAIVVAALALSLANALWPIPTNMTTGEEVLFIDQGIKVTYNGKDLQSNSDFNPPEGPEFDSQTIVQSGVSR
AFKGIFDDNFVPWKLRPRNSDFEPAAEAEKKTVKSLKIEQAGEDQDQVFKPTAGSVDESYSLEITQDGDATIKCQ
ASTGCLFGLESFVQLFYKHSDESQSLSYTPYAPVSIQDAPKFPHRGLVMDLARNWYPVEDIKRTIDAMSWNKMNR
LHLHMTNSQSWPIQIPALPELADKGAYRKGMSYSPKDISGIYEYATYRGVAVIMEIDMPNHIGIVELAYPEKDLT
VAFNKQPWQWYCLEPPCGAFQMDNANVTEFVDELFEDLLPRVSPYAAYFHTGGDELYLNDSAIDPTVNSNETAVI
VPLLQKFIDHVHGKVRDAGLTPVVWEDLISDYNQTLGDDVVVQAWLNDDSVKKLAEAGHKVIDSNHNFYYLDCGR
GQWLNFDNGVEFQKFYPFPDYCSPTKNWRLIYSHDPTAGLSEEAAKRVLGGEVAAWSEMTDGVNLDTNVWPRASA
AGEVLWSGRQDASGQNRSQLDAAPRLAELRERMVARGVRALPVQMIYCTQGNRTDCANSV
Coding >Ophio5|3678
ATGTCTCACATGATAGCAATCGTCGTTGCCGCGCTCGCGCTGAGCCTAGCCAATGCACTGTGGCCCATACCGACG
AATATGACAACCGGAGAAGAGGTCTTGTTCATTGACCAAGGCATAAAGGTCACTTACAACGGCAAAGATCTTCAA
AGTAATAGCGACTTCAATCCACCGGAGGGACCCGAATTTGACAGCCAGACCATCGTTCAATCTGGAGTTTCCCGT
GCCTTCAAGGGCATCTTTGACGATAACTTCGTCCCGTGGAAGCTGAGACCGAGAAACTCGGACTTTGAGCCCGCA
GCCGAGGCGGAGAAGAAGACGGTGAAAAGCCTCAAGATCGAACAAGCAGGGGAAGATCAGGACCAAGTCTTCAAG
CCCACTGCTGGCAGTGTGGACGAGTCGTATTCGCTAGAAATCACTCAGGATGGCGATGCCACAATCAAATGTCAG
GCATCAACCGGCTGCCTCTTCGGCCTCGAGTCGTTTGTCCAACTTTTCTACAAGCATAGCGATGAGTCTCAGTCT
TTGAGCTACACCCCTTACGCCCCCGTTTCCATCCAGGATGCACCCAAGTTTCCTCACCGCGGGCTCGTGATGGAT
CTGGCCCGTAACTGGTATCCCGTCGAGGACATCAAGAGGACCATCGACGCCATGTCGTGGAATAAGATGAACCGC
CTACACTTACACATGACCAATTCGCAATCCTGGCCCATCCAGATCCCGGCTCTACCGGAGCTGGCTGACAAGGGC
GCTTACCGCAAGGGCATGTCTTACTCACCAAAAGACATCTCCGGCATCTACGAATATGCCACCTACCGTGGCGTA
GCCGTCATCATGGAGATTGACATGCCAAACCATATCGGCATAGTTGAGCTTGCTTATCCGGAGAAGGACCTTACC
GTCGCCTTCAACAAGCAGCCGTGGCAATGGTACTGCCTTGAACCGCCGTGCGGTGCGTTCCAGATGGATAATGCC
AACGTAACTGAGTTTGTCGATGAATTATTTGAGGACTTGCTTCCCCGGGTCTCGCCCTACGCCGCTTATTTCCAC
ACGGGAGGGGATGAGCTATATCTAAACGATTCGGCCATTGATCCTACCGTCAATTCCAACGAAACGGCAGTCATC
GTTCCGCTGTTGCAGAAGTTTATCGACCATGTCCACGGCAAGGTTCGCGATGCTGGGCTCACGCCAGTGGTTTGG
GAAGATTTAATTTCCGACTACAATCAGACGCTCGGAGATGACGTCGTAGTTCAAGCCTGGCTGAACGACGACAGC
GTCAAGAAGCTGGCCGAGGCTGGCCACAAGGTTATTGATAGTAACCACAACTTCTACTATCTCGACTGTGGACGA
GGCCAGTGGCTGAACTTTGACAACGGCGTAGAGTTTCAGAAGTTCTATCCGTTTCCGGATTACTGCTCTCCGACG
AAGAACTGGCGCCTCATCTACTCTCACGACCCGACGGCCGGACTATCAGAGGAGGCGGCCAAGCGGGTTCTAGGC
GGCGAGGTGGCAGCGTGGAGTGAGATGACGGACGGCGTCAACCTTGATACCAACGTCTGGCCACGCGCAAGCGCC
GCCGGCGAAGTCCTATGGTCCGGTAGACAGGATGCCTCCGGTCAGAACCGTAGCCAACTGGACGCGGCGCCCCGG
TTAGCTGAGCTGAGGGAGCGTATGGTGGCCCGAGGCGTGCGGGCGTTACCGGTGCAGATGATTTACTGTACGCAG
GGCAACAGGACGGATTGTGCAAATTCTGTA
Transcript >Ophio5|3678
ATGTCTCACATGATAGCAATCGTCGTTGCCGCGCTCGCGCTGAGCCTAGCCAATGCACTGTGGCCCATACCGACG
AATATGACAACCGGAGAAGAGGTCTTGTTCATTGACCAAGGCATAAAGGTCACTTACAACGGCAAAGATCTTCAA
AGTAATAGCGACTTCAATCCACCGGAGGGACCCGAATTTGACAGCCAGACCATCGTTCAATCTGGAGTTTCCCGT
GCCTTCAAGGGCATCTTTGACGATAACTTCGTCCCGTGGAAGCTGAGACCGAGAAACTCGGACTTTGAGCCCGCA
GCCGAGGCGGAGAAGAAGACGGTGAAAAGCCTCAAGATCGAACAAGCAGGGGAAGATCAGGACCAAGTCTTCAAG
CCCACTGCTGGCAGTGTGGACGAGTCGTATTCGCTAGAAATCACTCAGGATGGCGATGCCACAATCAAATGTCAG
GCATCAACCGGCTGCCTCTTCGGCCTCGAGTCGTTTGTCCAACTTTTCTACAAGCATAGCGATGAGTCTCAGTCT
TTGAGCTACACCCCTTACGCCCCCGTTTCCATCCAGGATGCACCCAAGTTTCCTCACCGCGGGCTCGTGATGGAT
CTGGCCCGTAACTGGTATCCCGTCGAGGACATCAAGAGGACCATCGACGCCATGTCGTGGAATAAGATGAACCGC
CTACACTTACACATGACCAATTCGCAATCCTGGCCCATCCAGATCCCGGCTCTACCGGAGCTGGCTGACAAGGGC
GCTTACCGCAAGGGCATGTCTTACTCACCAAAAGACATCTCCGGCATCTACGAATATGCCACCTACCGTGGCGTA
GCCGTCATCATGGAGATTGACATGCCAAACCATATCGGCATAGTTGAGCTTGCTTATCCGGAGAAGGACCTTACC
GTCGCCTTCAACAAGCAGCCGTGGCAATGGTACTGCCTTGAACCGCCGTGCGGTGCGTTCCAGATGGATAATGCC
AACGTAACTGAGTTTGTCGATGAATTATTTGAGGACTTGCTTCCCCGGGTCTCGCCCTACGCCGCTTATTTCCAC
ACGGGAGGGGATGAGCTATATCTAAACGATTCGGCCATTGATCCTACCGTCAATTCCAACGAAACGGCAGTCATC
GTTCCGCTGTTGCAGAAGTTTATCGACCATGTCCACGGCAAGGTTCGCGATGCTGGGCTCACGCCAGTGGTTTGG
GAAGATTTAATTTCCGACTACAATCAGACGCTCGGAGATGACGTCGTAGTTCAAGCCTGGCTGAACGACGACAGC
GTCAAGAAGCTGGCCGAGGCTGGCCACAAGGTTATTGATAGTAACCACAACTTCTACTATCTCGACTGTGGACGA
GGCCAGTGGCTGAACTTTGACAACGGCGTAGAGTTTCAGAAGTTCTATCCGTTTCCGGATTACTGCTCTCCGACG
AAGAACTGGCGCCTCATCTACTCTCACGACCCGACGGCCGGACTATCAGAGGAGGCGGCCAAGCGGGTTCTAGGC
GGCGAGGTGGCAGCGTGGAGTGAGATGACGGACGGCGTCAACCTTGATACCAACGTCTGGCCACGCGCAAGCGCC
GCCGGCGAAGTCCTATGGTCCGGTAGACAGGATGCCTCCGGTCAGAACCGTAGCCAACTGGACGCGGCGCCCCGG
TTAGCTGAGCTGAGGGAGCGTATGGTGGCCCGAGGCGTGCGGGCGTTACCGGTGCAGATGATTTACTGTACGCAG
GGCAACAGGACGGATTGTGCAAATTCTGTATGA
Gene >Ophio5|3678
ATGTCTCACATGATAGCAATCGTCGTTGCCGCGCTCGCGCTGAGCCTAGCCAATGCACTGTGGCCCATACCGACG
AATATGACAACCGGAGAAGAGGTCTTGTTCATTGACCAAGGCATAAAGGTCACTTACAACGGCAAAGATGTGCGT
CACGTCACTCGTCATCGATCCTGCGCACCCCCTCCCCTATTTTTTTTTTAATCCCTCCCAAAATTGCTGACGGGA
GATTCGGTGAGTTCAACAGCTTCAAAGTAATAGCGACTTCAATCCACCGGAGGGACCCGAATTTGACAGCCAGAC
CATCGTTCAATCTGGAGTTTCCCGTGCCTTCAAGGGCATCTTTGACGATAACTTCGTCCCGTGGAAGCTGAGACC
GAGAAACTCGGACTTTGAGCCCGCAGCCGAGGCGGAGAAGAAGACGGTGAAAAGCCTCAAGATCGAACAAGCAGG
GGAAGATCAGGACCAAGTCTTCAAGCCCACTGCTGGCAGTGTGGACGAGTCGTATTCGCTAGAAATCACTCAGGA
TGGCGATGCCACAATCAAATGTCAGGCATCAACCGGCTGCCTCTTCGGCCTCGAGTCGTTTGTCCAACTTTTCTA
CAAGCATAGCGATGAGTCTCAGTCTTTGAGCTACACCCCTTACGCCCCCGTTTCCATCCAGGATGCACCCAAGTT
TCCTCACCGCGGGCTCGTGATGGATCTGGCCCGTAACTGGTATCCCGTCGAGGACATCAAGAGGACCATCGACGC
CATGTCGTGGAATAAGATGAACCGCCTACACTTACACATGACCAATTCGCAATCCTGGCCCATCCAGATCCCGGC
TCTACCGGAGCTGGCTGACAAGGGCGCTTACCGCAAGGGCATGTCTTACTCACCAAAAGACATCTCCGGCATCTA
CGAATATGCCACCTACCGTGGCGTAGCCGTCATCATGGAGATTGACATGCCAAACCATATCGGCATAGTTGAGCT
TGCTTATCCGGAGAAGGACCTTACCGTCGCCTTCAACAAGCAGCCGTGGCAATGGTACTGCCTTGAACCGCCGTG
CGGTGCGTTCCAGATGGATAATGCCAACGTAACTGAGTTTGTCGATGAATTATTTGAGGACTTGCTTCCCCGGGT
CTCGCCCTACGCCGCTTATTTCCACACGGGAGGGGATGAGCTATATCTAAACGATTCGGCCATTGATCCTACCGT
CAATTCCAACGAAACGGCAGTCATCGTTCCGCTGTTGCAGAAGTTTATCGACCATGTCCACGGCAAGGTTCGCGA
TGCTGGGCTCACGCCAGTGGTTTGGGAAGATTTAATTTCCGACTACAATCAGACGCTCGGAGATGACGTCGTAGT
TCAAGCCTGGCTGAACGACGACAGCGTCAAGAAGCTGGCCGAGGCTGGCCACAAGGTTATTGATAGTAACCACAA
CTTCTACGTGAGGAGGGACCCCTTCTCCCTGCAAGGTATATCGAAGGGGCGGATAAGGGCTTTAGCTGACACGGC
TTTGTTAGTATCTCGACTGTGGACGAGGCCAGTGGCTGAACTTTGACAACGGCGTAGAGTTTCAGAAGTTCTATC
CGTTTCCGGATTACTGCTCTCCGACGAAGAACTGGCGCCTCATCTACTCTCACGACCCGACGGCCGGACTATCAG
AGGAGGCGGCCAAGCGGGTTCTAGGCGGCGAGGTGGCAGCGTGGAGTGAGATGACGGACGGCGTCAACCTTGATA
CCAACGTCTGGCCACGCGCAAGCGCCGCCGGCGAAGTCCTATGGTCCGGTAGACAGGATGCCTCCGGTCAGAACC
GTAGCCAACTGGACGCGGCGCCCCGGTTAGCTGAGCTGAGGGAGCGTATGGTGGCCCGAGGCGTGCGGGCGTTAC
CGGTGCAGATGATTTACTGTACGCAGGGCAACAGGACGGATTGTGCAAATTCTGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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