Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3665
Gene name
Locationscaffold_29:40922..42373
Strand+
Gene length (bp)1451
Transcript length (bp)1386
Coding sequence length (bp)1383
Protein length (aa) 461

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.5

Transmembrane Domains

Domain # Start End Length
1 44 66 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3665
MGSTWASKSVDEPPPIDCPSPRHPGLKALLAFVTQRIRRAGARSLVLFAALFLVVPALVRLTPASWHRHWTWSQA
TSSNLRIVVFGSQDLLGSASGRPTWTERLCIELGCSSHFSLVPPAGSSHGLTSNGIYADEIHALEERMKKTDLAK
SPALNYSFVAEQYPVSAQTPDLEAQLQRFLSRQPAAVAPHSTLWVFTFGTWDIWNLAALPRESSEHAIDALVSHL
FSQVEVLYGDSLHRRSIAYSDFWAGVAKSDVERLADPGAQGRVDEREQEGFRIVIPDLLDVTLTPGWQTRPEPPA
PHSKAEQMRNAAFLTKRWNSKVGEELGRWVAKGRARPEAMELSDQPEGKYPAAILQTGKGGLMDGPYPRRAGMRS
TPAATILDAMTEQEVQRTGLSKEHAAIGMLDVSTPCVEGDETCSTPDAHLFHDAFTVGQRAAEGAVRVTAERISE
ELILSPRGRAL
Coding >Ophio5|3665
ATGGGCTCCACGTGGGCCTCCAAGTCGGTCGATGAACCGCCACCCATCGACTGTCCTTCTCCTCGGCACCCCGGG
CTCAAGGCGCTATTGGCTTTTGTCACGCAGCGCATCAGACGAGCGGGCGCGCGCTCCCTCGTGCTATTCGCGGCT
CTGTTTCTCGTCGTCCCAGCCCTCGTGCGCCTGACACCCGCATCCTGGCATCGCCATTGGACTTGGTCCCAGGCT
ACGAGCAGCAACTTGAGAATTGTCGTCTTCGGCTCCCAGGACCTACTGGGCAGCGCCTCCGGTCGGCCGACGTGG
ACGGAACGGCTCTGCATCGAGCTCGGCTGCTCCTCACATTTCTCCCTCGTCCCTCCAGCAGGCTCGAGTCACGGA
CTTACATCCAATGGCATCTACGCCGATGAGATCCATGCGCTCGAGGAACGGATGAAAAAGACGGATCTGGCCAAG
TCGCCGGCATTAAACTACTCCTTCGTCGCCGAACAATACCCCGTTTCGGCGCAGACGCCGGACCTTGAGGCGCAG
TTGCAGCGATTCCTTTCTCGCCAACCAGCTGCCGTCGCTCCACACAGCACCCTCTGGGTCTTTACCTTTGGAACC
TGGGACATTTGGAATCTGGCGGCTCTGCCTCGGGAATCTAGCGAGCACGCCATCGACGCCCTGGTGTCGCATCTA
TTCTCCCAGGTCGAGGTGCTGTATGGCGACTCACTCCATCGCAGATCGATTGCCTACTCGGACTTTTGGGCTGGC
GTGGCCAAGTCAGACGTCGAAAGGCTCGCAGACCCAGGCGCGCAAGGGAGGGTAGATGAGCGCGAGCAGGAAGGC
TTCCGGATCGTCATCCCAGACCTGCTCGACGTCACGCTCACGCCCGGGTGGCAGACGCGGCCGGAACCACCGGCA
CCGCACTCCAAGGCGGAGCAGATGCGCAACGCTGCCTTCCTGACCAAGCGATGGAACTCCAAGGTGGGAGAAGAG
CTGGGACGCTGGGTAGCCAAGGGAAGGGCGAGGCCGGAGGCGATGGAGCTGAGTGATCAACCCGAGGGCAAATAC
CCCGCAGCTATCTTGCAGACCGGCAAGGGGGGCCTCATGGACGGGCCGTATCCGCGCAGGGCCGGGATGCGGTCG
ACGCCGGCGGCCACGATCCTTGACGCCATGACAGAGCAGGAGGTGCAACGGACGGGTCTGAGCAAAGAGCACGCA
GCGATAGGCATGTTGGATGTGTCGACACCTTGCGTGGAGGGCGATGAGACATGCTCCACGCCGGACGCCCACCTG
TTTCACGATGCCTTTACCGTCGGCCAACGGGCGGCGGAGGGGGCCGTCCGGGTGACGGCGGAGAGAATCTCGGAG
GAGCTCATACTCTCACCGCGTGGAAGGGCATTG
Transcript >Ophio5|3665
ATGGGCTCCACGTGGGCCTCCAAGTCGGTCGATGAACCGCCACCCATCGACTGTCCTTCTCCTCGGCACCCCGGG
CTCAAGGCGCTATTGGCTTTTGTCACGCAGCGCATCAGACGAGCGGGCGCGCGCTCCCTCGTGCTATTCGCGGCT
CTGTTTCTCGTCGTCCCAGCCCTCGTGCGCCTGACACCCGCATCCTGGCATCGCCATTGGACTTGGTCCCAGGCT
ACGAGCAGCAACTTGAGAATTGTCGTCTTCGGCTCCCAGGACCTACTGGGCAGCGCCTCCGGTCGGCCGACGTGG
ACGGAACGGCTCTGCATCGAGCTCGGCTGCTCCTCACATTTCTCCCTCGTCCCTCCAGCAGGCTCGAGTCACGGA
CTTACATCCAATGGCATCTACGCCGATGAGATCCATGCGCTCGAGGAACGGATGAAAAAGACGGATCTGGCCAAG
TCGCCGGCATTAAACTACTCCTTCGTCGCCGAACAATACCCCGTTTCGGCGCAGACGCCGGACCTTGAGGCGCAG
TTGCAGCGATTCCTTTCTCGCCAACCAGCTGCCGTCGCTCCACACAGCACCCTCTGGGTCTTTACCTTTGGAACC
TGGGACATTTGGAATCTGGCGGCTCTGCCTCGGGAATCTAGCGAGCACGCCATCGACGCCCTGGTGTCGCATCTA
TTCTCCCAGGTCGAGGTGCTGTATGGCGACTCACTCCATCGCAGATCGATTGCCTACTCGGACTTTTGGGCTGGC
GTGGCCAAGTCAGACGTCGAAAGGCTCGCAGACCCAGGCGCGCAAGGGAGGGTAGATGAGCGCGAGCAGGAAGGC
TTCCGGATCGTCATCCCAGACCTGCTCGACGTCACGCTCACGCCCGGGTGGCAGACGCGGCCGGAACCACCGGCA
CCGCACTCCAAGGCGGAGCAGATGCGCAACGCTGCCTTCCTGACCAAGCGATGGAACTCCAAGGTGGGAGAAGAG
CTGGGACGCTGGGTAGCCAAGGGAAGGGCGAGGCCGGAGGCGATGGAGCTGAGTGATCAACCCGAGGGCAAATAC
CCCGCAGCTATCTTGCAGACCGGCAAGGGGGGCCTCATGGACGGGCCGTATCCGCGCAGGGCCGGGATGCGGTCG
ACGCCGGCGGCCACGATCCTTGACGCCATGACAGAGCAGGAGGTGCAACGGACGGGTCTGAGCAAAGAGCACGCA
GCGATAGGCATGTTGGATGTGTCGACACCTTGCGTGGAGGGCGATGAGACATGCTCCACGCCGGACGCCCACCTG
TTTCACGATGCCTTTACCGTCGGCCAACGGGCGGCGGAGGGGGCCGTCCGGGTGACGGCGGAGAGAATCTCGGAG
GAGCTCATACTCTCACCGCGTGGAAGGGCATTGTAG
Gene >Ophio5|3665
ATGGGCTCCACGTGGGCCTCCAAGTCGGTCGATGAACCGCCACCCATCGACTGTCCTTCTCCTCGGCACCCCGGG
CTCAAGGCGCTATTGGCTTTTGTCACGCAGCGCATCAGACGAGCGGGCGCGCGCTCCCTCGTGCTATTCGCGGCT
CTGTTTCTCGTCGTCCCAGCCCTCGTGCGCCTGACACCCGCATCCTGGCATCGCCATTGGACTTGGTCCCAGGCT
ACGAGCAGCAACTTGAGAATTGTCGTCTTCGGCTCCCAGGACCTACTGGGCAGCGCCTCCGGTCGGCCGACGTGG
ACGGAACGGCTCTGCATCGAGGTAAGCGATGATTGGCGAGGAGTACGAATCCTTGGGGGGCTCGGCAGCTCACAG
TCTCTCAAAAGCTCGGCTGCTCCTCACATTTCTCCCTCGTCCCTCCAGCAGGCTCGAGTCACGGACTTACATCCA
ATGGCATCTACGCCGATGAGATCCATGCGCTCGAGGAACGGATGAAAAAGACGGATCTGGCCAAGTCGCCGGCAT
TAAACTACTCCTTCGTCGCCGAACAATACCCCGTTTCGGCGCAGACGCCGGACCTTGAGGCGCAGTTGCAGCGAT
TCCTTTCTCGCCAACCAGCTGCCGTCGCTCCACACAGCACCCTCTGGGTCTTTACCTTTGGAACCTGGGACATTT
GGAATCTGGCGGCTCTGCCTCGGGAATCTAGCGAGCACGCCATCGACGCCCTGGTGTCGCATCTATTCTCCCAGG
TCGAGGTGCTGTATGGCGACTCACTCCATCGCAGATCGATTGCCTACTCGGACTTTTGGGCTGGCGTGGCCAAGT
CAGACGTCGAAAGGCTCGCAGACCCAGGCGCGCAAGGGAGGGTAGATGAGCGCGAGCAGGAAGGCTTCCGGATCG
TCATCCCAGACCTGCTCGACGTCACGCTCACGCCCGGGTGGCAGACGCGGCCGGAACCACCGGCACCGCACTCCA
AGGCGGAGCAGATGCGCAACGCTGCCTTCCTGACCAAGCGATGGAACTCCAAGGTGGGAGAAGAGCTGGGACGCT
GGGTAGCCAAGGGAAGGGCGAGGCCGGAGGCGATGGAGCTGAGTGATCAACCCGAGGGCAAATACCCCGCAGCTA
TCTTGCAGACCGGCAAGGGGGGCCTCATGGACGGGCCGTATCCGCGCAGGGCCGGGATGCGGTCGACGCCGGCGG
CCACGATCCTTGACGCCATGACAGAGCAGGAGGTGCAACGGACGGGTCTGAGCAAAGAGCACGCAGCGATAGGCA
TGTTGGATGTGTCGACACCTTGCGTGGAGGGCGATGAGACATGCTCCACGCCGGACGCCCACCTGTTTCACGATG
CCTTTACCGTCGGCCAACGGGCGGCGGAGGGGGCCGTCCGGGTGACGGCGGAGAGAATCTCGGAGGAGCTCATAC
TCTCACCGCGTGGAAGGGCATTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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