Protein ID | Ophio5|3631 |
Gene name | |
Location | scaffold_287:9859..12893 |
Strand | - |
Gene length (bp) | 3034 |
Transcript length (bp) | 2712 |
Coding sequence length (bp) | 2709 |
Protein length (aa) | 903 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13632 | Glyco_trans_2_3 | Glycosyl transferase family group 2 | 4.8E-47 | 523 | 749 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 271 | 293 | 22 |
2 | 308 | 330 | 22 |
3 | 678 | 700 | 22 |
4 | 715 | 737 | 22 |
5 | 750 | 772 | 22 |
6 | 792 | 814 | 22 |
7 | 844 | 866 | 22 |
8 | 876 | 898 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 1.01 | 0.16 | 1.87 |
CcL | In ants, during behavior modification | 47.97 | 15.31 | 80.62 |
CcD | In ants, recently dead | 5.12 | 1.94 | 8.31 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.000286 | yes |
SC16a | CcD | 0.000286 | yes |
CcL | CcD | 0.000286 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3631 MDSPPKSPAVGRAPLSRKTSFVGVSETSSQSNVAQTRPATPSNGSYDDIFRYRTMVSYLYSRVIASGWIPPTCSD DDCLGVMLRRSRGAYVASPDPAHPLLVGAVIRLNLAVAVTMRPQMLDGILQSLAPGQTELRFKGGSQIQIVDSLA SVRAATVKKFQYAAICLHERLVLVWQDDLQHIIPTAMQMEERLLSLVWGEGKLPFNMLQLPSRAPSTLSSGISSP NGTSTPALEKGGHKLQVSESVEDLSADPSFDRLESLARPVARTSALFIGLAMVTAISLIFGVYSGQLFTESLLDH SFSRLGLMAFCPLLLCISLFFFQVVFTNIFQMIGPIGGVSTNSRYYSCHKPCLRRAYADGFVPPKITIQMPVYKE GMDSVIVPTIRSLQAAVSYYESHGGTANILINDDGLRAGISPDEVQKRRDFYHDNNIGWVSRPSHNGPEGFVRKG KFKKASNMNFALNTSQKVEAYLQDMVDARLAAGGSEMMDEAEEADMYKDALCRVLEENPLAWAGGDIRIGEMILI VDSDTRVPVNCLLYGAAEMYLSPEVAIVQHSTGVLQVSRDYFENGITYFTNLVYTSIRFSIGSGEVAPFVGHNAF IRWQAVQDISREDAAGHTAYWSEEHVSEDFDMALRLQMKGNVIRIATYHNNEFKEGVSLTIYDEISRWKRYGFGV SELIFHPFYLWIFKGPFTPLFYTYLGSNIMLSSKISIMAYMCSYYALGSALPLSVMNYFVVGWFRDNLASCYLTS WNVFLSLIVIFNASSPVALAVFRYRTGERSLLGALMENAKWMPMMTVFFGGISYHIGTALLSHLLHIDMQWGATA KEKEDSNFFQEMPRIFRTFKYMYLLIFLLVAAMIYLGVWAPPDWAITDFSVVIPVAINLTFHALAPLVLNPSLMI FNY |
Coding | >Ophio5|3631 ATGGACTCTCCGCCCAAGTCCCCGGCCGTCGGCCGTGCCCCCCTTTCTAGGAAGACGTCGTTTGTTGGCGTGTCG GAGACGTCGAGTCAGTCCAATGTCGCTCAGACGAGGCCGGCTACGCCCTCTAACGGATCCTACGATGACATCTTT CGTTACCGTACTATGGTGAGCTACCTCTACAGCCGAGTCATCGCCAGCGGCTGGATTCCGCCCACCTGCAGCGAT GATGACTGTCTGGGCGTCATGCTGCGTCGTTCCCGGGGCGCCTATGTTGCCTCGCCCGACCCGGCTCACCCCCTT CTGGTCGGCGCCGTCATCAGGTTGAACCTGGCTGTGGCCGTGACGATGCGTCCACAGATGCTCGACGGCATCCTG CAGTCGTTGGCTCCGGGCCAGACGGAGCTTCGGTTCAAGGGCGGCTCGCAGATTCAAATCGTCGACTCCCTGGCC TCGGTGCGTGCCGCCACCGTCAAGAAGTTTCAGTATGCCGCCATCTGTCTCCACGAGCGTCTTGTTCTGGTCTGG CAGGATGACTTGCAGCACATTATTCCGACTGCCATGCAGATGGAGGAGAGGCTGCTGTCCCTGGTATGGGGAGAG GGAAAGCTTCCCTTCAATATGCTACAGTTGCCGAGTCGCGCCCCGTCGACTCTGTCGTCTGGTATCTCCAGCCCC AACGGCACGTCGACACCGGCGCTGGAGAAGGGCGGCCATAAGCTACAGGTCAGCGAGAGCGTCGAGGACCTGTCG GCAGACCCGTCCTTTGACCGGCTAGAGTCTCTTGCCCGGCCCGTGGCCAGAACTTCGGCCCTCTTCATCGGCCTC GCCATGGTGACGGCCATCAGTCTGATATTCGGCGTCTACTCCGGACAGCTCTTCACCGAGTCCCTTCTCGACCAC TCCTTTAGCCGGCTAGGCTTGATGGCCTTTTGTCCCCTCCTGCTATGCATCAGTCTCTTCTTCTTCCAGGTCGTC TTCACCAACATCTTTCAGATGATCGGTCCCATCGGCGGCGTCAGCACAAACTCCCGCTACTACTCATGCCACAAG CCGTGTCTGCGGCGCGCCTACGCCGACGGCTTCGTTCCGCCCAAGATTACGATCCAGATGCCCGTCTACAAGGAG GGCATGGACTCGGTCATCGTGCCGACGATCCGCAGTCTGCAGGCGGCCGTCTCCTACTACGAGTCGCACGGCGGG ACGGCCAATATCCTCATCAATGACGATGGCCTGCGCGCCGGCATCTCGCCCGACGAGGTACAGAAGAGACGCGAC TTTTACCACGATAACAACATTGGCTGGGTTTCGCGTCCCAGCCACAACGGTCCGGAGGGCTTCGTCCGCAAGGGC AAGTTTAAGAAGGCGTCCAACATGAACTTTGCCCTCAACACGTCGCAAAAGGTCGAGGCCTACCTCCAGGACATG GTCGACGCCAGGCTTGCCGCCGGGGGCTCCGAGATGATGGACGAGGCCGAGGAGGCCGACATGTACAAGGACGCG CTGTGCCGTGTGCTCGAGGAGAATCCCCTGGCCTGGGCCGGGGGAGATATTCGGATCGGGGAGATGATCCTGATT GTCGACTCGGACACTCGCGTGCCCGTCAACTGTCTCCTCTACGGCGCAGCCGAGATGTATCTCAGCCCCGAAGTC GCCATCGTCCAGCACTCGACGGGCGTCTTGCAGGTTTCGCGCGATTACTTTGAAAACGGCATCACCTATTTTACC AACCTCGTCTACACCTCGATCCGCTTCTCCATCGGCTCGGGCGAGGTGGCCCCCTTTGTGGGCCACAACGCCTTC ATCCGGTGGCAAGCTGTCCAGGATATAAGCCGCGAGGACGCGGCCGGTCATACGGCATACTGGTCCGAGGAACAC GTATCCGAAGACTTTGACATGGCGCTGCGGCTGCAGATGAAGGGCAACGTCATCCGAATCGCCACCTACCACAAC AACGAGTTTAAAGAAGGCGTCTCGCTGACCATCTACGACGAGATTTCGCGCTGGAAGCGGTATGGTTTCGGTGTC AGTGAACTCATCTTCCACCCCTTTTACCTCTGGATCTTCAAGGGCCCCTTTACGCCCCTCTTCTACACCTACCTC GGCTCCAACATCATGCTCTCGTCCAAGATTTCCATCATGGCCTACATGTGTTCGTACTACGCCCTCGGTTCGGCC CTGCCCTTGTCCGTCATGAACTACTTTGTTGTCGGTTGGTTCCGCGACAACCTGGCGTCCTGCTATCTCACGTCC TGGAACGTCTTCCTCTCCCTCATCGTCATCTTCAACGCCTCCAGCCCCGTCGCCCTCGCCGTCTTCCGTTACCGG ACTGGTGAGCGCTCGCTGCTGGGCGCCCTGATGGAGAACGCGAAGTGGATGCCGATGATGACCGTCTTCTTCGGC GGCATCTCGTACCATATCGGAACGGCCCTGCTTTCGCATCTGTTGCACATTGATATGCAGTGGGGGGCTACGGCC AAGGAGAAGGAGGACAGCAACTTCTTCCAGGAGATGCCGCGTATCTTTCGCACCTTCAAGTACATGTATCTGCTC ATCTTTCTCCTCGTCGCCGCCATGATTTATCTCGGCGTCTGGGCGCCTCCGGACTGGGCCATAACCGACTTTTCC GTTGTTATTCCTGTTGCTATCAACCTGACTTTTCACGCCCTTGCGCCTCTGGTCCTGAACCCGAGCTTGATGATT TTCAACTAT |
Transcript | >Ophio5|3631 ATGGACTCTCCGCCCAAGTCCCCGGCCGTCGGCCGTGCCCCCCTTTCTAGGAAGACGTCGTTTGTTGGCGTGTCG GAGACGTCGAGTCAGTCCAATGTCGCTCAGACGAGGCCGGCTACGCCCTCTAACGGATCCTACGATGACATCTTT CGTTACCGTACTATGGTGAGCTACCTCTACAGCCGAGTCATCGCCAGCGGCTGGATTCCGCCCACCTGCAGCGAT GATGACTGTCTGGGCGTCATGCTGCGTCGTTCCCGGGGCGCCTATGTTGCCTCGCCCGACCCGGCTCACCCCCTT CTGGTCGGCGCCGTCATCAGGTTGAACCTGGCTGTGGCCGTGACGATGCGTCCACAGATGCTCGACGGCATCCTG CAGTCGTTGGCTCCGGGCCAGACGGAGCTTCGGTTCAAGGGCGGCTCGCAGATTCAAATCGTCGACTCCCTGGCC TCGGTGCGTGCCGCCACCGTCAAGAAGTTTCAGTATGCCGCCATCTGTCTCCACGAGCGTCTTGTTCTGGTCTGG CAGGATGACTTGCAGCACATTATTCCGACTGCCATGCAGATGGAGGAGAGGCTGCTGTCCCTGGTATGGGGAGAG GGAAAGCTTCCCTTCAATATGCTACAGTTGCCGAGTCGCGCCCCGTCGACTCTGTCGTCTGGTATCTCCAGCCCC AACGGCACGTCGACACCGGCGCTGGAGAAGGGCGGCCATAAGCTACAGGTCAGCGAGAGCGTCGAGGACCTGTCG GCAGACCCGTCCTTTGACCGGCTAGAGTCTCTTGCCCGGCCCGTGGCCAGAACTTCGGCCCTCTTCATCGGCCTC GCCATGGTGACGGCCATCAGTCTGATATTCGGCGTCTACTCCGGACAGCTCTTCACCGAGTCCCTTCTCGACCAC TCCTTTAGCCGGCTAGGCTTGATGGCCTTTTGTCCCCTCCTGCTATGCATCAGTCTCTTCTTCTTCCAGGTCGTC TTCACCAACATCTTTCAGATGATCGGTCCCATCGGCGGCGTCAGCACAAACTCCCGCTACTACTCATGCCACAAG CCGTGTCTGCGGCGCGCCTACGCCGACGGCTTCGTTCCGCCCAAGATTACGATCCAGATGCCCGTCTACAAGGAG GGCATGGACTCGGTCATCGTGCCGACGATCCGCAGTCTGCAGGCGGCCGTCTCCTACTACGAGTCGCACGGCGGG ACGGCCAATATCCTCATCAATGACGATGGCCTGCGCGCCGGCATCTCGCCCGACGAGGTACAGAAGAGACGCGAC TTTTACCACGATAACAACATTGGCTGGGTTTCGCGTCCCAGCCACAACGGTCCGGAGGGCTTCGTCCGCAAGGGC AAGTTTAAGAAGGCGTCCAACATGAACTTTGCCCTCAACACGTCGCAAAAGGTCGAGGCCTACCTCCAGGACATG GTCGACGCCAGGCTTGCCGCCGGGGGCTCCGAGATGATGGACGAGGCCGAGGAGGCCGACATGTACAAGGACGCG CTGTGCCGTGTGCTCGAGGAGAATCCCCTGGCCTGGGCCGGGGGAGATATTCGGATCGGGGAGATGATCCTGATT GTCGACTCGGACACTCGCGTGCCCGTCAACTGTCTCCTCTACGGCGCAGCCGAGATGTATCTCAGCCCCGAAGTC GCCATCGTCCAGCACTCGACGGGCGTCTTGCAGGTTTCGCGCGATTACTTTGAAAACGGCATCACCTATTTTACC AACCTCGTCTACACCTCGATCCGCTTCTCCATCGGCTCGGGCGAGGTGGCCCCCTTTGTGGGCCACAACGCCTTC ATCCGGTGGCAAGCTGTCCAGGATATAAGCCGCGAGGACGCGGCCGGTCATACGGCATACTGGTCCGAGGAACAC GTATCCGAAGACTTTGACATGGCGCTGCGGCTGCAGATGAAGGGCAACGTCATCCGAATCGCCACCTACCACAAC AACGAGTTTAAAGAAGGCGTCTCGCTGACCATCTACGACGAGATTTCGCGCTGGAAGCGGTATGGTTTCGGTGTC AGTGAACTCATCTTCCACCCCTTTTACCTCTGGATCTTCAAGGGCCCCTTTACGCCCCTCTTCTACACCTACCTC GGCTCCAACATCATGCTCTCGTCCAAGATTTCCATCATGGCCTACATGTGTTCGTACTACGCCCTCGGTTCGGCC CTGCCCTTGTCCGTCATGAACTACTTTGTTGTCGGTTGGTTCCGCGACAACCTGGCGTCCTGCTATCTCACGTCC TGGAACGTCTTCCTCTCCCTCATCGTCATCTTCAACGCCTCCAGCCCCGTCGCCCTCGCCGTCTTCCGTTACCGG ACTGGTGAGCGCTCGCTGCTGGGCGCCCTGATGGAGAACGCGAAGTGGATGCCGATGATGACCGTCTTCTTCGGC GGCATCTCGTACCATATCGGAACGGCCCTGCTTTCGCATCTGTTGCACATTGATATGCAGTGGGGGGCTACGGCC AAGGAGAAGGAGGACAGCAACTTCTTCCAGGAGATGCCGCGTATCTTTCGCACCTTCAAGTACATGTATCTGCTC ATCTTTCTCCTCGTCGCCGCCATGATTTATCTCGGCGTCTGGGCGCCTCCGGACTGGGCCATAACCGACTTTTCC GTTGTTATTCCTGTTGCTATCAACCTGACTTTTCACGCCCTTGCGCCTCTGGTCCTGAACCCGAGCTTGATGATT TTCAACTATTGA |
Gene | >Ophio5|3631 ATGGACTCTCCGCCCAAGTCCCCGGCCGTCGGCCGTGCCCCCCTTTCTAGGAAGACGTCGTTTGTTGGCGTGTCG GAGACGTCGAGTCAGTCCAATGTCGCTCAGACGAGGCCGGCTACGCCCTCTAACGGATCCTACGATGACATCTTT CGTTACCGTACTGTGAGTCAAGCCTTGAGCCCGGGTCCATCCCCCACCCCCTCTTTTGTGGTGAACAATCATGAC GGCCCCAACTAACCGTACCTCCCTCCTCCCCCCAGATGGTGAGCTACCTCTACAGCCGAGTCATCGCCAGCGGCT GGATTCCGCCCACCTGCAGCGATGATGACTGTCTGGGCGTCATGCTGCGTCGTTCCCGGGGCGCCTATGTTGCCT CGCCCGACCCGGCTCACCCCCTTCTGGTCGGCGCCGTCATCAGGTTGAACCTGGCTGTGGCCGTGACGATGCGTC CACAGATGCTCGACGGCATCCTGCAGTCGTTGGCTCCGGGCCAGACGGAGCTTCGGTTCAAGGGCGGCTCGCAGA TTCAAATCGTCGACTCCCTGGCCTCGGTGCGTGCCGCCACCGTCAAGAAGTTTCAGTATGCCGCCATCTGTCTCC ACGAGCGTCTTGTTCTGGTCTGGCAGGATGACTTGCAGCACATTATTCCGACTGCCATGCAGATGGAGGAGAGGC TGCTGTCCCTGGTGAGAAGGCTCCCCCTTTTTTTTCCTTTTTTTTTTTCCCTTCCACCACCTTTGGCTCTGTTCA CGTTGCTGATAGAAAGCTTCTTTCAGGTATGGGGAGAGGGAAAGCTTCCCTTCAATATGCTACAGTTGCCGAGTC GCGCCCCGTCGACTCTGTCGTCTGGTATCTCCAGCCCCAACGGCACGTCGACACCGGCGCTGGAGAAGGGCGGCC ATAAGCTACAGGTCAGCGAGAGCGTCGAGGACCTGTCGGCAGACCCGTCCTTTGACCGGCTAGAGTCTCTTGCCC GGCCCGTGGCCAGAACTTCGGCCCTCTTCATCGGCCTCGCCATGGTGACGGCCATCAGTCTGATATTCGGCGTCT ACTCCGGACAGCTCTTCACCGAGTCCCTTCTCGACCACTCCTTTAGCCGGCTAGGCTTGATGGCCTTTTGTCCCC TCCTGCTATGCATCAGTCTCTTCTTCTTCCAGGTCGTCTTCACCAACATCTTTCAGATGATCGGTCCCATCGGCG GCGTCAGCACAAACTCCCGCTACTACTCATGCCACAAGCCGTGTCTGCGGCGCGCCTACGCCGACGGCTTCGTTC CGCCCAAGATTACGATCCAGATGCCCGTCTACAAGGAGGGCATGGACTCGGTCATCGTGCCGACGATCCGCAGTC TGCAGGCGGCCGTCTCCTACTACGAGTCGCACGGCGGGACGGCCAATATCCTCATCAATGACGATGGCCTGCGCG CCGGCATCTCGCCCGACGAGGTACAGAAGAGACGCGACTTTTACCACGATAACAACATTGGCTGGGTTTCGCGTC CCAGCCACAACGGTCCGGAGGGCTTCGTCCGCAAGGGCAAGTTTAAGAAGGCGTCCAACATGAACTTTGCCCTCA ACACGTCGCAAAAGGTCGAGGCCTACCTCCAGGACATGGTCGACGCCAGGCTTGCCGCCGGGGGCTCCGAGATGA TGGACGAGGCCGAGGAGGCCGACATGTACAAGGACGCGCTGTGCCGTGTGCTCGAGGAGAATCCCCTGGCCTGGG CCGGGGGAGATATTCGGATCGGGGAGATGATCCTGATTGTCGACTCGGACACTCGCGTGGTAAAGCCCCTCTCTA TCAAAGAAGAAGGCTGGGGAAGAAGACGTGCTCATGCGGTCGGCAGCCCGTCAACTGTCTCCTCTACGGCGCAGC CGAGATGTATCTCAGCCCCGAAGTCGCCATCGTCCAGCACTCGACGGGCGTCTTGCAGGTTTCGCGCGATTACTT TGAAAACGGCATCACCTATTTTACCAACCTCGTCTACACCTCGATCCGCTTCTCCATCGGCTCGGGCGAGGTGGC CCCCTTTGTGGGCCACAACGCCTTCATCCGGTGGCAAGGTAAACCTCCTCCTCCTCTATCGCGTGTGTGGCGAAC AAGTTGATATGGGAAAAAAGCTGAAAGCTTCGCAGCTGTCCAGGATATAAGCCGCGAGGACGCGGCCGGTCATAC GGCATACTGGTCCGAGGAACACGTATCCGAAGACTTTGACATGGCGCTGCGGCTGCAGATGAAGGGCAACGTCAT CCGAATCGCCACCTACCACAACAACGAGTTTAAAGAAGGCGTCTCGCTGACCATCTACGACGAGATTTCGCGCTG GAAGCGGTATGGTTTCGGTGTCAGTGAACTCATCTTCCACCCCTTTTACCTCTGGATCTTCAAGGGCCCCTTTAC GCCCCTCTTCTACACCTACCTCGGCTCCAACATCATGCTCTCGTCCAAGATTTCCATCATGGCCTACATGTGTTC GTACTACGCCCTCGGTTCGGCCCTGCCCTTGTCCGTCATGAACTACTTTGTTGTCGGTTGGTTCCGCGACAACCT GGCGTCCTGCTATCTCACGTCCTGGAACGTCTTCCTCTCCCTCATCGTCATCTTCAACGCCTCCAGCCCCGTCGC CCTCGCCGTCTTCCGTTACCGGACTGGTGAGCGCTCGCTGCTGGGCGCCCTGATGGAGAACGCGAAGTGGATGCC GATGATGACCGTCTTCTTCGGCGGCATCTCGTACCATATCGGAACGGCCCTGCTTTCGCATCTGTTGCACATTGA TATGCAGTGGGGGGCTACGGCCAAGGAGAAGGAGGACAGCAACTTCTTCCAGGAGATGCCGCGTATCTTTCGCAC CTTCAAGTACATGTATCTGCTCATCTTTCTCCTCGTCGCCGCCATGATTTATCTCGGCGTCTGGGCGCCTCCGGA CTGGGCCATAACCGACTTTTCCGTTGTTATTCCTGTTGCTATCAACCTGACTTTTCACGCCCTTGCGCCTCTGGT CCTGAACCCGAGCTTGATGATTTTCAACTATTGA |