© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|3623 |
| Gene name | |
| Location | scaffold_286:17277..17736 |
| Strand | + |
| Gene length (bp) | 459 |
| Transcript length (bp) | 459 |
| Coding sequence length (bp) | 456 |
| Protein length (aa) | 152 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1446 | 0.0759 | 0.8807 | 0.0688 | 0.0871 | 0.0074 | 0.1633 | 0.1762 | 0.162 | 0.0026 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 16 | 0.999772 |
| Orthofinder run ID | 4 |
| Orthogroup | 7275 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|01115 |
| Ophiocordyceps camponoti-rufipedis | Ophun1|7192 |
| Ophiocordyceps kimflemingae | Ophio5|3623 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3623 MRFLAIVISFVSLALARPISMKEAYDQAAPSHCESTTSWDDSVISTENRYETIENRLRQMNRSRFCTERIQAFSF HERHHMTKAGCLTIVEEHCSEYDEIQDLYECVDRYVKRHRFAVNEPSPTDSFSENPDMEPAEQEGSKLEGEEWNT DH |
| Coding | >Ophio5|3623 ATGAGGTTTCTCGCCATCGTCATTTCCTTTGTCAGCCTGGCCCTCGCCAGGCCCATCTCCATGAAGGAGGCCTAC GATCAGGCTGCGCCTAGCCACTGCGAGTCAACGACATCGTGGGATGACAGCGTCATATCAACTGAGAATAGATAT GAGACAATTGAGAACAGGCTTAGACAGATGAACCGCTCCCGTTTCTGCACCGAGCGTATCCAGGCTTTTTCCTTT CATGAAAGGCATCACATGACCAAGGCCGGTTGCTTAACCATCGTCGAGGAGCACTGCAGTGAATACGACGAGATA CAGGACTTGTATGAATGCGTGGACCGATACGTGAAAAGGCATAGATTCGCCGTCAACGAGCCGTCTCCAACGGAT TCGTTTTCCGAGAACCCTGATATGGAGCCAGCCGAGCAGGAGGGTAGCAAATTAGAGGGAGAGGAGTGGAATACA GATCAC |
| Transcript | >Ophio5|3623 ATGAGGTTTCTCGCCATCGTCATTTCCTTTGTCAGCCTGGCCCTCGCCAGGCCCATCTCCATGAAGGAGGCCTAC GATCAGGCTGCGCCTAGCCACTGCGAGTCAACGACATCGTGGGATGACAGCGTCATATCAACTGAGAATAGATAT GAGACAATTGAGAACAGGCTTAGACAGATGAACCGCTCCCGTTTCTGCACCGAGCGTATCCAGGCTTTTTCCTTT CATGAAAGGCATCACATGACCAAGGCCGGTTGCTTAACCATCGTCGAGGAGCACTGCAGTGAATACGACGAGATA CAGGACTTGTATGAATGCGTGGACCGATACGTGAAAAGGCATAGATTCGCCGTCAACGAGCCGTCTCCAACGGAT TCGTTTTCCGAGAACCCTGATATGGAGCCAGCCGAGCAGGAGGGTAGCAAATTAGAGGGAGAGGAGTGGAATACA GATCACTGA |
| Gene | >Ophio5|3623 ATGAGGTTTCTCGCCATCGTCATTTCCTTTGTCAGCCTGGCCCTCGCCAGGCCCATCTCCATGAAGGAGGCCTAC GATCAGGCTGCGCCTAGCCACTGCGAGTCAACGACATCGTGGGATGACAGCGTCATATCAACTGAGAATAGATAT GAGACAATTGAGAACAGGCTTAGACAGATGAACCGCTCCCGTTTCTGCACCGAGCGTATCCAGGCTTTTTCCTTT CATGAAAGGCATCACATGACCAAGGCCGGTTGCTTAACCATCGTCGAGGAGCACTGCAGTGAATACGACGAGATA CAGGACTTGTATGAATGCGTGGACCGATACGTGAAAAGGCATAGATTCGCCGTCAACGAGCCGTCTCCAACGGAT TCGTTTTCCGAGAACCCTGATATGGAGCCAGCCGAGCAGGAGGGTAGCAAATTAGAGGGAGAGGAGTGGAATACA GATCACTGA |