Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3618
Gene name
Locationscaffold_286:6529..7748
Strand-
Gene length (bp)1219
Transcript length (bp)1023
Coding sequence length (bp)1020
Protein length (aa) 340

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09362 DUF1996 Domain of unknown function (DUF1996) 3.7E-68 37 268

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3618
MKLDKCAALAHVLLHTPAVLGHIFTVNCKQLTIQRGDPILFPGVVSPHVHTVVGGTAFALTETNEDAKAANATTC
DKLLDNSNYWQPQLYHERSDGKFELVEMQGIAAYYIDRACDYAPGRQNCDNVPHGKAPPAGLRMVVGNPYLRTYD
ASNPEQRAVSHICLGRGTSEDTPHLPSKQCERLRAETYFPSCWDGRNLDSSNHKSHMAFPVIGDYNTGVCPPSHP
TAILSVFLEFFYDTAAIKNFNRWVWAMGDPTGYGLHGDFINGWTDQGALERAMDTCTGSMGVNDPRCSLNVGSSG
PGQPSPQSPQIQPPDEEVGLRGPLDKLPGNNPVTGRTIRS
Coding >Ophio5|3618
ATGAAGCTCGACAAGTGTGCCGCCCTGGCTCATGTCCTACTTCATACGCCCGCCGTGCTCGGGCACATCTTCACC
GTCAACTGCAAGCAACTGACGATACAGCGGGGAGACCCAATTCTGTTTCCTGGCGTCGTCTCTCCGCACGTTCAT
ACTGTTGTTGGAGGCACCGCCTTTGCCCTGACTGAAACGAACGAAGATGCCAAGGCCGCCAACGCCACAACCTGT
GACAAGCTCCTGGACAATAGTAATTATTGGCAGCCTCAGCTCTACCATGAGCGGTCCGACGGAAAATTTGAGCTG
GTAGAGATGCAGGGAATCGCAGCCTACTACATCGATCGAGCTTGCGACTATGCTCCAGGTCGTCAGAACTGTGAT
AATGTACCGCATGGCAAAGCACCTCCTGCAGGACTGCGTATGGTCGTGGGAAACCCGTATCTTCGAACATACGAC
GCATCTAACCCTGAACAACGAGCCGTCTCTCATATCTGCTTAGGCAGGGGTACATCCGAAGACACTCCTCATCTG
CCGTCAAAACAATGCGAGCGTCTCCGTGCCGAGACATATTTTCCATCCTGTTGGGATGGAAGAAACCTGGACAGC
TCGAACCATAAGAGCCACATGGCGTTTCCTGTTATCGGTGATTACAACACTGGCGTCTGCCCCCCTTCGCACCCT
ACAGCCATCTTGTCCGTCTTTCTCGAGTTCTTCTACGACACAGCGGCTATTAAAAACTTTAACCGCTGGGTATGG
GCCATGGGCGACCCGACCGGCTACGGTCTCCATGGAGATTTCATCAACGGATGGACAGATCAGGGGGCTTTGGAG
CGGGCCATGGACACATGTACTGGATCGATGGGCGTCAATGACCCGCGTTGCAGTTTGAACGTTGGATCAAGCGGA
CCGGGTCAGCCGAGCCCGCAATCACCGCAGATTCAGCCTCCTGACGAGGAGGTAGGCCTTCGCGGCCCTCTCGAT
AAGTTGCCAGGGAACAACCCGGTTACTGGTCGAACAATTCGAAGT
Transcript >Ophio5|3618
ATGAAGCTCGACAAGTGTGCCGCCCTGGCTCATGTCCTACTTCATACGCCCGCCGTGCTCGGGCACATCTTCACC
GTCAACTGCAAGCAACTGACGATACAGCGGGGAGACCCAATTCTGTTTCCTGGCGTCGTCTCTCCGCACGTTCAT
ACTGTTGTTGGAGGCACCGCCTTTGCCCTGACTGAAACGAACGAAGATGCCAAGGCCGCCAACGCCACAACCTGT
GACAAGCTCCTGGACAATAGTAATTATTGGCAGCCTCAGCTCTACCATGAGCGGTCCGACGGAAAATTTGAGCTG
GTAGAGATGCAGGGAATCGCAGCCTACTACATCGATCGAGCTTGCGACTATGCTCCAGGTCGTCAGAACTGTGAT
AATGTACCGCATGGCAAAGCACCTCCTGCAGGACTGCGTATGGTCGTGGGAAACCCGTATCTTCGAACATACGAC
GCATCTAACCCTGAACAACGAGCCGTCTCTCATATCTGCTTAGGCAGGGGTACATCCGAAGACACTCCTCATCTG
CCGTCAAAACAATGCGAGCGTCTCCGTGCCGAGACATATTTTCCATCCTGTTGGGATGGAAGAAACCTGGACAGC
TCGAACCATAAGAGCCACATGGCGTTTCCTGTTATCGGTGATTACAACACTGGCGTCTGCCCCCCTTCGCACCCT
ACAGCCATCTTGTCCGTCTTTCTCGAGTTCTTCTACGACACAGCGGCTATTAAAAACTTTAACCGCTGGGTATGG
GCCATGGGCGACCCGACCGGCTACGGTCTCCATGGAGATTTCATCAACGGATGGACAGATCAGGGGGCTTTGGAG
CGGGCCATGGACACATGTACTGGATCGATGGGCGTCAATGACCCGCGTTGCAGTTTGAACGTTGGATCAAGCGGA
CCGGGTCAGCCGAGCCCGCAATCACCGCAGATTCAGCCTCCTGACGAGGAGGTAGGCCTTCGCGGCCCTCTCGAT
AAGTTGCCAGGGAACAACCCGGTTACTGGTCGAACAATTCGAAGTTAG
Gene >Ophio5|3618
ATGAAGCTCGACAAGTGTGCCGCCCTGGCTCATGTCCTACTTCATACGCCCGCCGTGCTCGGGCACATCTTCACC
GTCAACTGCAAGCAACTGACGATACAGCGGGGAGACCCAATTCTGTTTCCTGGCGTCGTCTCTCCGCACGTTCAT
ACTGTTGTTGGAGGCACCGCCTTTGCCCTGACTGAAACGAACGAAGATGCCAAGGCCGCCAACGCCACAACCTGT
GACAAGCTCCTGGACAATAGTAATTATTGGCAGCCTCAGCTCTACCATGAGCGGTCCGACGGAAAATTTGAGCTG
GTAGAGATGCAGGGAATCGTGAGTCTTCACCCCCGTCTGTTGAGGCTGGGACTGATAACTCTACGCACATAGGCA
GCCTACTACATCGATCGAGCTTGCGACTATGCTCCAGGTCGTCAGAACTGTGATAATGTACCGCATGGCAAAGCA
CCTCCTGCAGGACTGCGTATGGTCGTGGGAAACCCGTATCTTCGGTCAGCTCTTGGAACCTCATCGACTCGCAAG
GAGAAAGACGAGACTATCTATACTGACGACAGCATAGAACATACGACGCATCTAACCCTGAACAACGAGCCGTCT
CTCATATCTGCTTAGGCAGGGGTACATCCGAAGACACTCCTCATCTGCCGTCAAAACAATGCGAGCGTCTCCGTG
CCGAGACATATTTTCCATCCTGTTGGGATGGAAGAAACCTGGACAGCTCGAACCATAAGAGCCACGTAAACGAGC
CTCAACCTCACATGATACATGCCAATACCACGTAGGCTGGCTGAGCTGACTTCTCTCTTCTTAGATGGCGTTTCC
TGTTATCGGTGATTACAACACTGGCGTCTGCCCCCCTTCGCACCCTACAGCCATCTTGTCCGTCTTTCTCGAGTT
CTTCTACGACACAGCGGCTATTAAAAACTTTAACCGCTGGGTATGGGCCATGGGCGACCCGACCGGCTACGGTCT
CCATGGAGATTTCATCAACGGATGGACAGATCAGGGGGCTTTGGAGCGGGCCATGGACACATGTACTGGATCGAT
GGGCGTCAATGACCCGCGTTGCAGTTTGAACGTTGGATCAAGCGGACCGGGTCAGCCGAGCCCGCAATCACCGCA
GATTCAGCCTCCTGACGAGGAGGTAGGCCTTCGCGGCCCTCTCGATAAGTTGCCAGGGAACAACCCGGTTACTGG
TCGAACAATTCGAAGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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