© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|3609 |
| Gene name | |
| Location | scaffold_285:7880..9161 |
| Strand | + |
| Gene length (bp) | 1281 |
| Transcript length (bp) | 1281 |
| Coding sequence length (bp) | 1278 |
| Protein length (aa) | 426 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00628 | PHD | PHD-finger | 2.8E-11 | 110 | 158 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74508|SPP1_SCHPO | Set1 complex component spp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spp1 PE=3 SV=1 | 68 | 378 | 4.0E-22 |
| sp|Q8C9B9|DIDO1_MOUSE | Death-inducer obliterator 1 OS=Mus musculus GN=Dido1 PE=1 SV=4 | 88 | 157 | 7.0E-14 |
| sp|Q9BTC0|DIDO1_HUMAN | Death-inducer obliterator 1 OS=Homo sapiens GN=DIDO1 PE=1 SV=5 | 107 | 157 | 1.0E-13 |
| sp|Q03012|SPP1_YEAST | COMPASS component SPP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPP1 PE=1 SV=1 | 110 | 205 | 2.0E-10 |
| sp|Q9W0T1|NU301_DROME | Nucleosome-remodeling factor subunit NURF301 OS=Drosophila melanogaster GN=E(bx) PE=1 SV=2 | 110 | 160 | 8.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74508|SPP1_SCHPO | Set1 complex component spp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spp1 PE=3 SV=1 | 68 | 378 | 4.0E-22 |
| sp|Q8C9B9|DIDO1_MOUSE | Death-inducer obliterator 1 OS=Mus musculus GN=Dido1 PE=1 SV=4 | 88 | 157 | 7.0E-14 |
| sp|Q9BTC0|DIDO1_HUMAN | Death-inducer obliterator 1 OS=Homo sapiens GN=DIDO1 PE=1 SV=5 | 107 | 157 | 1.0E-13 |
| sp|Q03012|SPP1_YEAST | COMPASS component SPP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPP1 PE=1 SV=1 | 110 | 205 | 2.0E-10 |
| sp|Q9W0T1|NU301_DROME | Nucleosome-remodeling factor subunit NURF301 OS=Drosophila melanogaster GN=E(bx) PE=1 SV=2 | 110 | 160 | 8.0E-10 |
| sp|Q9W0T1|NU301_DROME | Nucleosome-remodeling factor subunit NURF301 OS=Drosophila melanogaster GN=E(bx) PE=1 SV=2 | 110 | 177 | 5.0E-09 |
| sp|Q5EA28|CXXC1_BOVIN | CXXC-type zinc finger protein 1 OS=Bos taurus GN=CXXC1 PE=2 SV=1 | 93 | 156 | 5.0E-09 |
| sp|Q9P0U4|CXXC1_HUMAN | CXXC-type zinc finger protein 1 OS=Homo sapiens GN=CXXC1 PE=1 SV=2 | 93 | 156 | 7.0E-09 |
| sp|Q9WTU0|PHF2_MOUSE | Lysine-specific demethylase PHF2 OS=Mus musculus GN=Phf2 PE=1 SV=2 | 110 | 167 | 1.0E-08 |
| sp|O75151|PHF2_HUMAN | Lysine-specific demethylase PHF2 OS=Homo sapiens GN=PHF2 PE=1 SV=4 | 110 | 167 | 1.0E-08 |
| sp|Q9CWW7|CXXC1_MOUSE | CXXC-type zinc finger protein 1 OS=Mus musculus GN=Cxxc1 PE=2 SV=1 | 92 | 156 | 2.0E-08 |
| sp|Q12830|BPTF_HUMAN | Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF PE=1 SV=3 | 106 | 156 | 2.0E-08 |
| sp|Q9W352|CXXC1_DROME | CXXC-type zinc finger protein 1 OS=Drosophila melanogaster GN=Cfp1 PE=1 SV=1 | 93 | 160 | 3.0E-08 |
| sp|Q80TJ7|PHF8_MOUSE | Histone lysine demethylase PHF8 OS=Mus musculus GN=Phf8 PE=1 SV=2 | 110 | 167 | 7.0E-08 |
| sp|Q9UPP1|PHF8_HUMAN | Histone lysine demethylase PHF8 OS=Homo sapiens GN=PHF8 PE=1 SV=3 | 110 | 156 | 8.0E-08 |
| sp|Q6P949|PHF2_DANRE | Lysine-specific demethylase phf2 OS=Danio rerio GN=phf2 PE=2 SV=3 | 110 | 167 | 8.0E-08 |
| sp|E6ZGB4|PHF2_DICLA | Lysine-specific demethylase phf2 OS=Dicentrarchus labrax GN=phf2 PE=3 SV=1 | 110 | 167 | 8.0E-08 |
| sp|Q6ZMT4|KDM7A_HUMAN | Lysine-specific demethylase 7A OS=Homo sapiens GN=KDM7A PE=1 SV=2 | 110 | 167 | 1.0E-07 |
| sp|Q5RHD1|KDM7A_DANRE | Lysine-specific demethylase 7A OS=Danio rerio GN=kdm7a PE=2 SV=2 | 110 | 156 | 1.0E-07 |
| sp|P0CH95|PHF8_DANRE | Histone lysine demethylase PHF8 OS=Danio rerio GN=phf8 PE=1 SV=1 | 110 | 156 | 2.0E-07 |
| sp|Q3UWM4|KDM7A_MOUSE | Lysine-specific demethylase 7A OS=Mus musculus GN=Kdm7a PE=2 SV=2 | 110 | 167 | 3.0E-07 |
| sp|P0CF52|KDM7B_DANRE | Lysine-specific demethylase 7B OS=Danio rerio GN=jhdm1db PE=2 SV=1 | 110 | 167 | 3.0E-07 |
| sp|Q08D35|KDM7A_XENTR | Lysine-specific demethylase 7A OS=Xenopus tropicalis GN=kdm7a PE=2 SV=1 | 110 | 156 | 2.0E-06 |
| sp|P29375|KDM5A_HUMAN | Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3 | 100 | 229 | 4.0E-06 |
| sp|Q6BER5|NU301_CAEEL | Nucleosome-remodeling factor subunit NURF301-like OS=Caenorhabditis elegans GN=nurf-1 PE=1 SV=2 | 110 | 158 | 9.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3609 MEKPQGGVYDDQPRFALIDEKGTQQTSIKEQEQPAAEAGNSAAPDAVSRRASTSPAPLPSTEASEATPTTKRKSL TASAKKRPKRPKKKSGKPKSGREASATDESDNGPYCICRGPDDHRWMICCENCEDWFHGECINITKETGESLIEK FICPNCTKGNRVTLYKKMCRLEGCRKPARLKESPPSDFCSNDHAQAWWERMVARLPKGAQNLGDQLSQEQLMAIL EADLGCVGENGMWKIARTPFSGELPEGAGREGDSTGDALSRILSDEEKEILKKTAKERAKLAEESLNCHKMLTLL ELVQEDRKAGITAGRCTDDMCGYHSALDVVSARDAFAAYLKTVEGEATFKDSKLVSPPEAEICGRKRCKVHSGWH KMLLLGVKHEIKELANQVLELEEEEGIIREAARERWKRKQAENNWVEVLDS |
| Coding | >Ophio5|3609 ATGGAGAAACCGCAGGGCGGCGTCTACGATGACCAGCCCCGATTCGCACTCATCGACGAGAAAGGGACGCAACAA ACATCGATAAAGGAGCAGGAGCAGCCCGCGGCCGAGGCAGGAAACTCAGCCGCGCCTGATGCCGTCTCGAGGCGA GCTTCCACTTCTCCTGCGCCTCTGCCTTCCACGGAAGCATCCGAAGCAACACCGACGACCAAGCGGAAAAGTTTG ACAGCGTCGGCCAAGAAGCGCCCCAAACGGCCGAAGAAAAAATCCGGCAAGCCAAAGAGCGGGCGTGAGGCGTCG GCCACCGACGAGTCGGATAATGGACCCTACTGCATCTGTCGCGGCCCAGACGACCACCGTTGGATGATTTGCTGC GAAAACTGCGAGGACTGGTTCCACGGAGAATGCATCAACATCACCAAAGAGACTGGCGAGAGTCTGATCGAAAAG TTCATTTGCCCCAACTGCACCAAGGGGAATCGCGTCACTCTCTACAAAAAGATGTGCCGTCTAGAGGGCTGTCGC AAGCCCGCCCGCCTCAAGGAGAGTCCTCCTAGCGACTTTTGCTCCAACGACCATGCTCAGGCGTGGTGGGAGCGC ATGGTTGCCCGGCTGCCCAAGGGCGCGCAAAACTTGGGCGACCAGCTCAGCCAGGAACAGCTGATGGCTATCCTG GAGGCCGATCTGGGATGCGTTGGCGAGAACGGCATGTGGAAGATTGCGAGAACGCCCTTCTCTGGCGAGCTGCCT GAGGGAGCCGGCCGAGAGGGGGACTCTACAGGAGACGCCCTCTCCCGCATCCTCAGCGACGAGGAGAAGGAAATC CTCAAAAAGACTGCCAAGGAACGCGCTAAGCTAGCCGAGGAGTCTCTCAACTGCCACAAGATGCTGACGCTTCTC GAGCTCGTTCAGGAGGACCGGAAAGCGGGCATCACGGCCGGGCGGTGCACCGACGACATGTGCGGATACCACTCG GCGCTGGACGTGGTATCTGCGCGAGATGCCTTTGCCGCGTATCTCAAGACGGTCGAGGGCGAGGCCACTTTCAAG GATTCGAAACTCGTCTCCCCGCCGGAGGCGGAGATATGCGGGCGTAAGCGGTGCAAGGTCCATAGCGGGTGGCAT AAGATGCTACTCCTAGGGGTCAAGCACGAGATCAAAGAGCTGGCAAATCAGGTGCTGGAACTCGAAGAGGAGGAG GGCATCATCAGGGAGGCGGCGAGAGAGCGGTGGAAGCGGAAGCAGGCCGAGAACAACTGGGTCGAGGTGCTCGAT TCA |
| Transcript | >Ophio5|3609 ATGGAGAAACCGCAGGGCGGCGTCTACGATGACCAGCCCCGATTCGCACTCATCGACGAGAAAGGGACGCAACAA ACATCGATAAAGGAGCAGGAGCAGCCCGCGGCCGAGGCAGGAAACTCAGCCGCGCCTGATGCCGTCTCGAGGCGA GCTTCCACTTCTCCTGCGCCTCTGCCTTCCACGGAAGCATCCGAAGCAACACCGACGACCAAGCGGAAAAGTTTG ACAGCGTCGGCCAAGAAGCGCCCCAAACGGCCGAAGAAAAAATCCGGCAAGCCAAAGAGCGGGCGTGAGGCGTCG GCCACCGACGAGTCGGATAATGGACCCTACTGCATCTGTCGCGGCCCAGACGACCACCGTTGGATGATTTGCTGC GAAAACTGCGAGGACTGGTTCCACGGAGAATGCATCAACATCACCAAAGAGACTGGCGAGAGTCTGATCGAAAAG TTCATTTGCCCCAACTGCACCAAGGGGAATCGCGTCACTCTCTACAAAAAGATGTGCCGTCTAGAGGGCTGTCGC AAGCCCGCCCGCCTCAAGGAGAGTCCTCCTAGCGACTTTTGCTCCAACGACCATGCTCAGGCGTGGTGGGAGCGC ATGGTTGCCCGGCTGCCCAAGGGCGCGCAAAACTTGGGCGACCAGCTCAGCCAGGAACAGCTGATGGCTATCCTG GAGGCCGATCTGGGATGCGTTGGCGAGAACGGCATGTGGAAGATTGCGAGAACGCCCTTCTCTGGCGAGCTGCCT GAGGGAGCCGGCCGAGAGGGGGACTCTACAGGAGACGCCCTCTCCCGCATCCTCAGCGACGAGGAGAAGGAAATC CTCAAAAAGACTGCCAAGGAACGCGCTAAGCTAGCCGAGGAGTCTCTCAACTGCCACAAGATGCTGACGCTTCTC GAGCTCGTTCAGGAGGACCGGAAAGCGGGCATCACGGCCGGGCGGTGCACCGACGACATGTGCGGATACCACTCG GCGCTGGACGTGGTATCTGCGCGAGATGCCTTTGCCGCGTATCTCAAGACGGTCGAGGGCGAGGCCACTTTCAAG GATTCGAAACTCGTCTCCCCGCCGGAGGCGGAGATATGCGGGCGTAAGCGGTGCAAGGTCCATAGCGGGTGGCAT AAGATGCTACTCCTAGGGGTCAAGCACGAGATCAAAGAGCTGGCAAATCAGGTGCTGGAACTCGAAGAGGAGGAG GGCATCATCAGGGAGGCGGCGAGAGAGCGGTGGAAGCGGAAGCAGGCCGAGAACAACTGGGTCGAGGTGCTCGAT TCATAA |
| Gene | >Ophio5|3609 ATGGAGAAACCGCAGGGCGGCGTCTACGATGACCAGCCCCGATTCGCACTCATCGACGAGAAAGGGACGCAACAA ACATCGATAAAGGAGCAGGAGCAGCCCGCGGCCGAGGCAGGAAACTCAGCCGCGCCTGATGCCGTCTCGAGGCGA GCTTCCACTTCTCCTGCGCCTCTGCCTTCCACGGAAGCATCCGAAGCAACACCGACGACCAAGCGGAAAAGTTTG ACAGCGTCGGCCAAGAAGCGCCCCAAACGGCCGAAGAAAAAATCCGGCAAGCCAAAGAGCGGGCGTGAGGCGTCG GCCACCGACGAGTCGGATAATGGACCCTACTGCATCTGTCGCGGCCCAGACGACCACCGTTGGATGATTTGCTGC GAAAACTGCGAGGACTGGTTCCACGGAGAATGCATCAACATCACCAAAGAGACTGGCGAGAGTCTGATCGAAAAG TTCATTTGCCCCAACTGCACCAAGGGGAATCGCGTCACTCTCTACAAAAAGATGTGCCGTCTAGAGGGCTGTCGC AAGCCCGCCCGCCTCAAGGAGAGTCCTCCTAGCGACTTTTGCTCCAACGACCATGCTCAGGCGTGGTGGGAGCGC ATGGTTGCCCGGCTGCCCAAGGGCGCGCAAAACTTGGGCGACCAGCTCAGCCAGGAACAGCTGATGGCTATCCTG GAGGCCGATCTGGGATGCGTTGGCGAGAACGGCATGTGGAAGATTGCGAGAACGCCCTTCTCTGGCGAGCTGCCT GAGGGAGCCGGCCGAGAGGGGGACTCTACAGGAGACGCCCTCTCCCGCATCCTCAGCGACGAGGAGAAGGAAATC CTCAAAAAGACTGCCAAGGAACGCGCTAAGCTAGCCGAGGAGTCTCTCAACTGCCACAAGATGCTGACGCTTCTC GAGCTCGTTCAGGAGGACCGGAAAGCGGGCATCACGGCCGGGCGGTGCACCGACGACATGTGCGGATACCACTCG GCGCTGGACGTGGTATCTGCGCGAGATGCCTTTGCCGCGTATCTCAAGACGGTCGAGGGCGAGGCCACTTTCAAG GATTCGAAACTCGTCTCCCCGCCGGAGGCGGAGATATGCGGGCGTAAGCGGTGCAAGGTCCATAGCGGGTGGCAT AAGATGCTACTCCTAGGGGTCAAGCACGAGATCAAAGAGCTGGCAAATCAGGTGCTGGAACTCGAAGAGGAGGAG GGCATCATCAGGGAGGCGGCGAGAGAGCGGTGGAAGCGGAAGCAGGCCGAGAACAACTGGGTCGAGGTGCTCGAT TCATAA |