Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3591
Gene name
Locationscaffold_283:20824..22002
Strand-
Gene length (bp)1178
Transcript length (bp)1032
Coding sequence length (bp)1029
Protein length (aa) 343

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 1.6E-05 21 83

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

Domain # Start End Length
1 210 232 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3591
MAAPTAVWGTIRGASKFYSVHCLRNCLYDAVLAYTNCRLDDDSCQCLPHHSGKIQGNSRVCMLERCGGPTYPDEF
FSILDQGCSSVLKGLTPTALGWGLALQSLDNYRGIPASTTSTQPVLLPNQMLAAAATIETTSRPSEMPATAATIE
TTSTSWPSQIPAAADTVEATSGPSEMPAATATIEPTSLPSRIPGASSEPPSLSPSKMEAITIAGIVLCTTGALIL
AIIICFYRAQLASLAGFHKLGKGRRRSSATVINEKRVPSGSSPERQLDISPYPHPVQGAVAELPGSFSFAQELHS
PRVNVELPSPTIFPPDEKMPFDEEPEHPENMEESCPPYSPTHN
Coding >Ophio5|3591
ATGGCCGCTCCCACGGCAGTTTGGGGGACTATCCGCGGTGCTTCGAAATTTTACTCGGTGCACTGCCTAAGAAAC
TGCCTTTATGACGCCGTACTGGCCTACACAAATTGCCGGCTAGACGATGACTCTTGCCAATGCCTTCCCCATCAC
TCCGGAAAAATCCAAGGCAACTCTCGCGTCTGCATGCTCGAGCGTTGCGGCGGGCCTACTTATCCTGATGAATTC
TTCTCAATCCTTGACCAGGGTTGCTCCTCCGTTCTCAAAGGCCTAACGCCAACAGCTCTCGGCTGGGGCCTTGCG
CTACAATCTTTGGATAATTATCGCGGCATACCCGCATCCACAACCTCAACCCAGCCGGTCTTATTGCCTAACCAG
ATGCTGGCAGCGGCAGCCACAATCGAGACCACCTCAAGGCCTAGCGAAATGCCGGCGACGGCAGCCACAATCGAG
ACCACCTCAACCTCATGGCCTAGCCAGATACCGGCAGCGGCAGACACAGTCGAGGCCACCTCCGGGCCTAGCGAA
ATGCCGGCGGCGACAGCCACGATCGAGCCAACTTCATTGCCTAGTCGGATTCCGGGTGCCTCATCCGAGCCGCCT
TCATTATCTCCTAGCAAGATGGAGGCAATCACCATCGCAGGGATTGTCCTATGCACCACTGGAGCGCTCATACTA
GCCATCATTATCTGCTTCTATCGCGCTCAACTCGCAAGTCTGGCCGGTTTTCACAAGCTGGGAAAAGGTCGCCGC
CGCAGCTCCGCCACGGTTATCAACGAAAAGAGAGTGCCATCAGGATCCTCACCCGAGCGACAGTTGGATATCTCT
CCTTATCCACACCCAGTCCAAGGTGCCGTGGCCGAATTACCTGGAAGTTTTAGTTTTGCACAGGAGTTGCACTCG
CCGAGAGTCAACGTCGAGTTACCAAGCCCGACGATATTTCCTCCCGACGAAAAGATGCCTTTTGATGAGGAGCCT
GAGCATCCAGAAAATATGGAAGAATCGTGTCCTCCTTATTCACCAACTCACAAT
Transcript >Ophio5|3591
ATGGCCGCTCCCACGGCAGTTTGGGGGACTATCCGCGGTGCTTCGAAATTTTACTCGGTGCACTGCCTAAGAAAC
TGCCTTTATGACGCCGTACTGGCCTACACAAATTGCCGGCTAGACGATGACTCTTGCCAATGCCTTCCCCATCAC
TCCGGAAAAATCCAAGGCAACTCTCGCGTCTGCATGCTCGAGCGTTGCGGCGGGCCTACTTATCCTGATGAATTC
TTCTCAATCCTTGACCAGGGTTGCTCCTCCGTTCTCAAAGGCCTAACGCCAACAGCTCTCGGCTGGGGCCTTGCG
CTACAATCTTTGGATAATTATCGCGGCATACCCGCATCCACAACCTCAACCCAGCCGGTCTTATTGCCTAACCAG
ATGCTGGCAGCGGCAGCCACAATCGAGACCACCTCAAGGCCTAGCGAAATGCCGGCGACGGCAGCCACAATCGAG
ACCACCTCAACCTCATGGCCTAGCCAGATACCGGCAGCGGCAGACACAGTCGAGGCCACCTCCGGGCCTAGCGAA
ATGCCGGCGGCGACAGCCACGATCGAGCCAACTTCATTGCCTAGTCGGATTCCGGGTGCCTCATCCGAGCCGCCT
TCATTATCTCCTAGCAAGATGGAGGCAATCACCATCGCAGGGATTGTCCTATGCACCACTGGAGCGCTCATACTA
GCCATCATTATCTGCTTCTATCGCGCTCAACTCGCAAGTCTGGCCGGTTTTCACAAGCTGGGAAAAGGTCGCCGC
CGCAGCTCCGCCACGGTTATCAACGAAAAGAGAGTGCCATCAGGATCCTCACCCGAGCGACAGTTGGATATCTCT
CCTTATCCACACCCAGTCCAAGGTGCCGTGGCCGAATTACCTGGAAGTTTTAGTTTTGCACAGGAGTTGCACTCG
CCGAGAGTCAACGTCGAGTTACCAAGCCCGACGATATTTCCTCCCGACGAAAAGATGCCTTTTGATGAGGAGCCT
GAGCATCCAGAAAATATGGAAGAATCGTGTCCTCCTTATTCACCAACTCACAATTGA
Gene >Ophio5|3591
ATGGCCGCTCCCACGGCAGTTTGGGGGACTATCCGCGGTGCTTCGAAATTTTACTCGGTGCACTGCCTAAGAAAC
TGCCTTTATGACGCCGTACTGGCCTACACAAATTGCCGGCTAGACGATGACTCTTGCCAATGCCTTCCCCATCAC
TCCGGAAAAATCCAAGGCAACTCTCGCGTCTGCATGCTCGAGCGTTGCGGCGGGCCTACTTATCCTGATGGTAGG
TCACTGCTGTCTATTCCCACAACTATAGCTGTCTCTTCTCTACACCGGCCGCTCGAACAGTCTCAAACTCTTACC
TCTCGTCTGCAGAATTCTTCTCAATCCTTGACCAGGGTTGCTCCTCCGTTCTCAAAGGCCTAACGCCAACAGCTC
TCGGCTGGGGCCTTGCGCTACAATCTTTGGATAATTATCGCGGCATACCCGCATCCACAACCTCAACCCAGCCGG
TCTTATTGCCTAACCAGATGCTGGCAGCGGCAGCCACAATCGAGACCACCTCAAGGCCTAGCGAAATGCCGGCGA
CGGCAGCCACAATCGAGACCACCTCAACCTCATGGCCTAGCCAGATACCGGCAGCGGCAGACACAGTCGAGGCCA
CCTCCGGGCCTAGCGAAATGCCGGCGGCGACAGCCACGATCGAGCCAACTTCATTGCCTAGTCGGATTCCGGGTG
CCTCATCCGAGCCGCCTTCATTATCTCCTAGCAAGATGGAGGCAATCACCATCGCAGGGATTGTCCTATGCACCA
CTGGAGCGCTCATACTAGCCATCATTATCTGCTTCTATCGCGCTCAACTCGCAAGTCTGGCCGGTTTTCACAAGC
TGGGAAAAGGTCGCCGCCGCAGCTCCGCCACGGTTATCAACGAAAAGAGAGTGCCATCAGGATCCTCACCCGAGC
GACAGTTGGATATCGTGAGTCCCGTTTGCAGGCCGTGACAGCAGCTGTGCGCTAATCCACAGCACCAGTCTCCTT
ATCCACACCCAGTCCAAGGTGCCGTGGCCGAATTACCTGGAAGTTTTAGTTTTGCACAGGAGTTGCACTCGCCGA
GAGTCAACGTCGAGTTACCAAGCCCGACGATATTTCCTCCCGACGAAAAGATGCCTTTTGATGAGGAGCCTGAGC
ATCCAGAAAATATGGAAGAATCGTGTCCTCCTTATTCACCAACTCACAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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