Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3576
Gene name
Locationscaffold_282:3491..4441
Strand+
Gene length (bp)950
Transcript length (bp)870
Coding sequence length (bp)867
Protein length (aa) 289

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

Domain # Start End Length
1 81 100 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3576
MDKVWFKLRQTHYPPGPEDKILAGDGDDSQSAICLGHIIPDLGHIDFPINSGAIVPFPSRMTVFHSHSLQFRWHD
ARKSGLGLALGAGAAFAAALGLMSIKASIRLAFQRSIDDYQKFERLDTYIVQPNRRYVDECLEREEMKQFVGDQN
DWTFFIITGIKVARAGGRSRQESGGSETDGGPQLTNLPSVLTAEATAELKRERSRTTEEKDMSDFVWAVRLAKVH
KGILMTDWSIDPFTRRATFGQGDGDEVDVVAVVKDEGLDEFKLVDDDEAGEAVVLNETDWKEET
Coding >Ophio5|3576
ATGGACAAGGTATGGTTCAAACTCCGGCAGACGCACTATCCGCCGGGCCCCGAGGATAAGATCCTCGCAGGCGAC
GGCGACGACTCACAGTCAGCCATCTGTCTCGGCCACATCATTCCAGACCTTGGCCACATCGACTTCCCCATCAAC
TCGGGCGCCATCGTCCCCTTTCCGTCGCGCATGACCGTCTTCCACTCGCATTCGCTCCAGTTCCGATGGCATGAT
GCTCGGAAGTCGGGCCTGGGTTTGGCACTTGGCGCAGGAGCCGCGTTTGCCGCTGCTCTGGGCCTCATGTCTATC
AAGGCGAGCATTCGGCTCGCTTTTCAGAGGTCCATTGACGATTATCAAAAGTTTGAACGGCTCGACACGTACATT
GTGCAGCCCAATCGCCGCTATGTCGATGAATGCCTGGAAAGGGAGGAGATGAAGCAGTTTGTCGGGGACCAGAAC
GACTGGACCTTTTTCATCATCACCGGCATCAAGGTTGCACGAGCCGGCGGGAGGTCAAGGCAAGAGTCGGGCGGC
AGTGAAACGGATGGCGGGCCGCAGCTGACTAATCTGCCCAGCGTCCTCACGGCAGAGGCGACGGCGGAGCTCAAA
CGTGAGAGATCGCGAACGACGGAGGAGAAGGACATGTCTGACTTTGTATGGGCGGTGAGGCTGGCCAAGGTTCAC
AAGGGAATCCTCATGACGGACTGGTCCATCGATCCCTTTACTCGGAGAGCGACTTTCGGCCAGGGAGACGGAGAC
GAGGTGGACGTGGTTGCCGTCGTCAAGGACGAAGGGTTGGATGAGTTCAAGCTCGTTGACGATGATGAGGCCGGA
GAGGCTGTCGTGCTGAATGAGACGGACTGGAAGGAGGAGACT
Transcript >Ophio5|3576
ATGGACAAGGTATGGTTCAAACTCCGGCAGACGCACTATCCGCCGGGCCCCGAGGATAAGATCCTCGCAGGCGAC
GGCGACGACTCACAGTCAGCCATCTGTCTCGGCCACATCATTCCAGACCTTGGCCACATCGACTTCCCCATCAAC
TCGGGCGCCATCGTCCCCTTTCCGTCGCGCATGACCGTCTTCCACTCGCATTCGCTCCAGTTCCGATGGCATGAT
GCTCGGAAGTCGGGCCTGGGTTTGGCACTTGGCGCAGGAGCCGCGTTTGCCGCTGCTCTGGGCCTCATGTCTATC
AAGGCGAGCATTCGGCTCGCTTTTCAGAGGTCCATTGACGATTATCAAAAGTTTGAACGGCTCGACACGTACATT
GTGCAGCCCAATCGCCGCTATGTCGATGAATGCCTGGAAAGGGAGGAGATGAAGCAGTTTGTCGGGGACCAGAAC
GACTGGACCTTTTTCATCATCACCGGCATCAAGGTTGCACGAGCCGGCGGGAGGTCAAGGCAAGAGTCGGGCGGC
AGTGAAACGGATGGCGGGCCGCAGCTGACTAATCTGCCCAGCGTCCTCACGGCAGAGGCGACGGCGGAGCTCAAA
CGTGAGAGATCGCGAACGACGGAGGAGAAGGACATGTCTGACTTTGTATGGGCGGTGAGGCTGGCCAAGGTTCAC
AAGGGAATCCTCATGACGGACTGGTCCATCGATCCCTTTACTCGGAGAGCGACTTTCGGCCAGGGAGACGGAGAC
GAGGTGGACGTGGTTGCCGTCGTCAAGGACGAAGGGTTGGATGAGTTCAAGCTCGTTGACGATGATGAGGCCGGA
GAGGCTGTCGTGCTGAATGAGACGGACTGGAAGGAGGAGACTTGA
Gene >Ophio5|3576
ATGGACAAGGTATGGTTCAAACTCCGGCAGACGCACTATCCGCCGGGCCCCGAGGATAAGATCCTCGCAGGCGAC
GGCGACGACTCACAGTCAGCCATCTGTCTCGGCCACATCATTCCAGACCTTGGCCACATCGACTTCCCCATCAAC
TCGGGCGCCATCGTCCCCTTTCCGTCGCGCATGACCGTCTTCCACTCGCATTCGCTCCAGTTCCGATGGCATGAT
GCTCGGAAGTCGGGCCTGGGTTTGGCACTTGGCGCAGGAGCCGCGTTTGCCGCTGCTCTGGGCCTCATGTCTATC
AAGGCGAGCATTCGGCTCGCTTTTCAGAGGTCCATTGACGATTATCAAAAGTTTGAACGGCTCGACACGTACATT
GTGCAGCCCAATCGCCGCTATGTCGATGAATGCCTGGAAAGGGAGGAGATGAAGCAGTTTGTCGGGGACCAGAAC
GACTGGACCTTTTTCATCATCACCGGCATCAAGGTTGCACGAGCCGGCGGGAGGTCAAGGCAAGAGTCGGGCGGC
AGTGAAACGGATGGCGGGCCGCAGCTGTACGTTCTTCTTCTTCTTCTTCTTCTCAGGCTACGAGACACACCAAGC
AACTGATTGCGGGACGAGGGACTTGGAACAGGACTAATCTGCCCAGCGTCCTCACGGCAGAGGCGACGGCGGAGC
TCAAACGTGAGAGATCGCGAACGACGGAGGAGAAGGACATGTCTGACTTTGTATGGGCGGTGAGGCTGGCCAAGG
TTCACAAGGGAATCCTCATGACGGACTGGTCCATCGATCCCTTTACTCGGAGAGCGACTTTCGGCCAGGGAGACG
GAGACGAGGTGGACGTGGTTGCCGTCGTCAAGGACGAAGGGTTGGATGAGTTCAAGCTCGTTGACGATGATGAGG
CCGGAGAGGCTGTCGTGCTGAATGAGACGGACTGGAAGGAGGAGACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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