© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|3558 |
| Gene name | |
| Location | scaffold_280:18442..18938 |
| Strand | + |
| Gene length (bp) | 496 |
| Transcript length (bp) | 438 |
| Coding sequence length (bp) | 435 |
| Protein length (aa) | 145 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04110 | APG12 | Ubiquitin-like autophagy protein Apg12 | 1.1E-25 | 58 | 145 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q51P78|ATG12_MAGO7 | Ubiquitin-like protein ATG12 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=ATG12 PE=3 SV=1 | 24 | 145 | 1.0E-54 |
| sp|Q7S083|ATG12_NEUCR | Ubiquitin-like protein atg12 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=atg12 PE=3 SV=1 | 24 | 145 | 5.0E-52 |
| sp|Q2GSG9|ATG12_CHAGB | Ubiquitin-like protein ATG12 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=ATG12 PE=3 SV=2 | 6 | 145 | 2.0E-47 |
| sp|Q2UMW6|ATG12_ASPOR | Ubiquitin-like protein ATG12 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=atg12 PE=3 SV=1 | 5 | 145 | 2.0E-45 |
| sp|A6RA46|ATG12_AJECN | Ubiquitin-like protein ATG12 OS=Ajellomyces capsulatus (strain NAm1 / WU24) GN=ATG12 PE=3 SV=1 | 20 | 145 | 2.0E-44 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q51P78|ATG12_MAGO7 | Ubiquitin-like protein ATG12 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=ATG12 PE=3 SV=1 | 24 | 145 | 1.0E-54 |
| sp|Q7S083|ATG12_NEUCR | Ubiquitin-like protein atg12 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=atg12 PE=3 SV=1 | 24 | 145 | 5.0E-52 |
| sp|Q2GSG9|ATG12_CHAGB | Ubiquitin-like protein ATG12 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=ATG12 PE=3 SV=2 | 6 | 145 | 2.0E-47 |
| sp|Q2UMW6|ATG12_ASPOR | Ubiquitin-like protein ATG12 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=atg12 PE=3 SV=1 | 5 | 145 | 2.0E-45 |
| sp|A6RA46|ATG12_AJECN | Ubiquitin-like protein ATG12 OS=Ajellomyces capsulatus (strain NAm1 / WU24) GN=ATG12 PE=3 SV=1 | 20 | 145 | 2.0E-44 |
| sp|A1CTJ1|ATG12_ASPCL | Ubiquitin-like protein ATG12 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=atg12 PE=3 SV=2 | 5 | 145 | 2.0E-44 |
| sp|Q5BCH0|ATG12_EMENI | Ubiquitin-like protein ATG12 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=atg12 PE=3 SV=2 | 10 | 145 | 5.0E-44 |
| sp|A1DMW6|ATG12_NEOFI | Ubiquitin-like protein ATG12 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg12 PE=3 SV=2 | 16 | 145 | 5.0E-44 |
| sp|Q1E8C2|ATG12_COCIM | Ubiquitin-like protein ATG12 OS=Coccidioides immitis (strain RS) GN=ATG12 PE=3 SV=1 | 2 | 145 | 6.0E-44 |
| sp|A4D9P4|ATG12_ASPFU | Ubiquitin-like protein ATG12 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=atg12 PE=3 SV=1 | 16 | 145 | 6.0E-44 |
| sp|A7KAM3|ATG12_PENRW | Ubiquitin-like protein ATG12 OS=Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255) GN=atg12 PE=3 SV=1 | 5 | 145 | 4.0E-43 |
| sp|A7EAE5|ATG12_SCLS1 | Ubiquitin-like protein ATG12 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg12 PE=3 SV=2 | 31 | 145 | 1.0E-41 |
| sp|Q0UNW1|ATG12_PHANO | Ubiquitin-like protein ATG12 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=ATG12 PE=3 SV=1 | 16 | 145 | 8.0E-37 |
| sp|P0CM28|ATG12_CRYNJ | Ubiquitin-like protein ATG12 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ATG12 PE=3 SV=1 | 59 | 145 | 1.0E-19 |
| sp|P0CM29|ATG12_CRYNB | Ubiquitin-like protein ATG12 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ATG12 PE=3 SV=1 | 59 | 145 | 1.0E-19 |
| sp|Q6BU30|ATG12_DEBHA | Ubiquitin-like protein ATG12 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ATG12 PE=3 SV=1 | 2 | 145 | 2.0E-19 |
| sp|Q6BZZ1|ATG12_YARLI | Ubiquitin-like protein ATG12 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATG12 PE=3 SV=1 | 3 | 145 | 5.0E-19 |
| sp|Q9US24|ATG12_SCHPO | Ubiquitin-like protein ATG12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atg12 PE=3 SV=1 | 56 | 145 | 1.0E-18 |
| sp|Q86CR6|ATG12_DICDI | Ubiquitin-like protein atg12 OS=Dictyostelium discoideum GN=atg12 PE=3 SV=1 | 58 | 145 | 3.0E-18 |
| sp|A7TJM4|ATG12_VANPO | Ubiquitin-like protein ATG12 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ATG12 PE=3 SV=1 | 2 | 145 | 2.0E-17 |
| sp|Q6CUD5|ATG12_KLULA | Ubiquitin-like protein ATG12 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ATG12 PE=3 SV=1 | 58 | 145 | 2.0E-16 |
| sp|A2YAG8|ATG12_ORYSI | Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. indica GN=ATG12 PE=3 SV=2 | 58 | 145 | 1.0E-15 |
| sp|Q69NP0|ATG12_ORYSJ | Ubiquitin-like protein ATG12 OS=Oryza sativa subsp. japonica GN=ATG12 PE=3 SV=2 | 58 | 145 | 1.0E-15 |
| sp|P38316|ATG12_YEAST | Ubiquitin-like protein ATG12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATG12 PE=1 SV=1 | 58 | 145 | 3.0E-15 |
| sp|A6ZLF7|ATG12_YEAS7 | Ubiquitin-like protein ATG12 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG12 PE=3 SV=1 | 58 | 145 | 3.0E-15 |
| sp|A5E1F1|ATG12_LODEL | Ubiquitin-like protein ATG12 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=ATG12 PE=3 SV=1 | 57 | 145 | 9.0E-15 |
| sp|Q9LVK3|AT12B_ARATH | Ubiquitin-like protein ATG12B OS=Arabidopsis thaliana GN=ATG12B PE=1 SV=1 | 58 | 145 | 2.0E-14 |
| sp|Q8S924|AT12A_ARATH | Ubiquitin-like protein ATG12A OS=Arabidopsis thaliana GN=ATG12A PE=1 SV=1 | 58 | 145 | 5.0E-14 |
| sp|Q5AKU4|ATG12_CANAL | Ubiquitin-like protein ATG12 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ATG12 PE=3 SV=1 | 26 | 145 | 4.0E-13 |
| sp|Q1SF86|ATG12_MEDTR | Ubiquitin-like protein ATG12 OS=Medicago truncatula GN=ATG12 PE=3 SV=1 | 58 | 145 | 4.0E-13 |
| sp|Q9CQY1|ATG12_MOUSE | Ubiquitin-like protein ATG12 OS=Mus musculus GN=Atg12 PE=1 SV=1 | 6 | 145 | 2.0E-12 |
| sp|Q6FMM7|ATG12_CANGA | Ubiquitin-like protein ATG12 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ATG12 PE=3 SV=1 | 57 | 145 | 3.0E-12 |
| sp|Q2TBJ5|ATG12_RAT | Ubiquitin-like protein ATG12 OS=Rattus norvegicus GN=Atg12 PE=2 SV=1 | 55 | 145 | 1.0E-11 |
| sp|A5DK05|ATG12_PICGU | Ubiquitin-like protein ATG12 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=ATG12 PE=3 SV=2 | 58 | 145 | 3.0E-11 |
| sp|O94817|ATG12_HUMAN | Ubiquitin-like protein ATG12 OS=Homo sapiens GN=ATG12 PE=1 SV=1 | 21 | 145 | 3.0E-11 |
| sp|Q3T0W7|ATG12_BOVIN | Ubiquitin-like protein ATG12 OS=Bos taurus GN=ATG12 PE=2 SV=1 | 22 | 145 | 6.0E-11 |
| sp|A3GI31|ATG12_PICST | Ubiquitin-like protein ATG12 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=ATG12 PE=3 SV=3 | 58 | 145 | 7.0E-11 |
| sp|Q5R7W1|ATG12_PONAB | Ubiquitin-like protein ATG12 OS=Pongo abelii GN=ATG12 PE=2 SV=1 | 21 | 145 | 7.0E-11 |
| sp|Q75EB4|ATG12_ASHGO | Ubiquitin-like protein ATG12 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG12 PE=3 SV=1 | 58 | 145 | 2.0E-10 |
| sp|A7KAJ7|ATG12_PICAN | Ubiquitin-like protein ATG12 OS=Pichia angusta GN=ATG12 PE=3 SV=1 | 10 | 145 | 4.0E-10 |
| sp|Q9VTU1|APG12_DROME | Autophagy protein 12-like OS=Drosophila melanogaster GN=Atg12 PE=3 SV=3 | 58 | 145 | 7.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005737 | cytoplasm | Yes |
| GO:0000045 | autophagosome assembly | Yes |
| GO:0009987 | cellular process | No |
| GO:0007033 | vacuole organization | No |
| GO:0022607 | cellular component assembly | No |
| GO:0006996 | organelle organization | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0070925 | organelle assembly | No |
| GO:0016043 | cellular component organization | No |
| GO:0005575 | cellular_component | No |
| GO:1905037 | autophagosome organization | No |
| GO:0008150 | biological_process | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.6387 | 0.4262 | 0.0767 | 0.0858 | 0.1224 | 0.0097 | 0.1234 | 0.4956 | 0.2243 | 0.0014 |
| Orthofinder run ID | 4 |
| Orthogroup | 5333 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3558 MESGSSAPASSMMDSPEDEDESTSPELPLTMSASVILADLPRDATAALAGAGAFVNDKVVVRFKPVGAAPALAQD LCKISAARRFEEVVRYLRRKLRCAETDSVFLYVNSAFAPSLDEVVGNLHQCFKNAHDQLVVAYSITPAFG |
| Coding | >Ophio5|3558 ATGGAGTCAGGCTCGTCCGCCCCAGCATCATCGATGATGGACTCGCCCGAGGACGAAGACGAATCCACCTCGCCC GAGCTGCCGCTCACCATGTCGGCGTCGGTGATACTTGCCGACCTGCCCCGCGACGCCACGGCGGCGCTGGCCGGT GCCGGCGCCTTCGTCAACGACAAGGTCGTGGTACGTTTCAAGCCCGTCGGCGCGGCGCCTGCGCTGGCTCAGGAC CTGTGCAAGATCTCGGCCGCGCGGCGTTTCGAGGAGGTGGTGCGCTATCTGAGGCGGAAGCTGCGCTGTGCAGAG ACGGATAGCGTCTTTCTTTACGTGAACAGCGCGTTTGCGCCGTCGCTGGATGAGGTTGTGGGCAATCTCCATCAG TGTTTCAAGAATGCTCACGACCAGCTTGTCGTTGCCTATTCCATCACGCCTGCTTTCGGA |
| Transcript | >Ophio5|3558 ATGGAGTCAGGCTCGTCCGCCCCAGCATCATCGATGATGGACTCGCCCGAGGACGAAGACGAATCCACCTCGCCC GAGCTGCCGCTCACCATGTCGGCGTCGGTGATACTTGCCGACCTGCCCCGCGACGCCACGGCGGCGCTGGCCGGT GCCGGCGCCTTCGTCAACGACAAGGTCGTGGTACGTTTCAAGCCCGTCGGCGCGGCGCCTGCGCTGGCTCAGGAC CTGTGCAAGATCTCGGCCGCGCGGCGTTTCGAGGAGGTGGTGCGCTATCTGAGGCGGAAGCTGCGCTGTGCAGAG ACGGATAGCGTCTTTCTTTACGTGAACAGCGCGTTTGCGCCGTCGCTGGATGAGGTTGTGGGCAATCTCCATCAG TGTTTCAAGAATGCTCACGACCAGCTTGTCGTTGCCTATTCCATCACGCCTGCTTTCGGATGA |
| Gene | >Ophio5|3558 ATGGAGTCAGGCTCGTCCGCCCCAGCATCATCGATGATGGACTCGCCCGAGGACGAAGACGAATCCACCTCGCCC GAGCTGCCGCTCACCATGTCGGCGTCGGTGATACTTGCCGACCTGCCCCGCGACGCCACGGCGGCGCTGGCCGGT GCCGGCGCCTTCGTCAACGACAAGGTCGTGGTACGTTTCAAGCCCGTCGGCGCGGCGCCTGCGCTGGCTCAGGAC CTGTGCAAGATCTCGGCCGCGCGGCGTTTCGAGGAGGTGGTGCGCTATCTGAGGCGGAAGCTGCGCTGTGCAGAG ACGGATAGCGTCTTTCTTTACGTGAACAGCGCGTTTGCGCCGTCGCTGGATGAGGTTGTGGGCAATCTCCATCAG GTAATTCCCTTTTCACTCGCTTCCTCTGGGGATAGATAAGCTGATGGCTGTTACGCAGTGTTTCAAGAATGCTCA CGACCAGCTTGTCGTTGCCTATTCCATCACGCCTGCTTTCGGATGA |