Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3551
Gene name
Locationscaffold_280:1919..2474
Strand-
Gene length (bp)555
Transcript length (bp)555
Coding sequence length (bp)552
Protein length (aa) 184

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B3I5|A3024_ARTBC Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 80 183 7.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3551
MKKMNRSVVAGLLTALVCVVVAEPLTIDLTGDQPKVINGGQTIAIGNDQGGSNGKEAQGRGGSVKSGAGSVSNAA
GGQRQDFTVVAGGGADIYAPNFLNAAVGSTVTVQFNTGNHTVTEGFAGQACRPLQAKDPKALHSGHIPFALGQQT
VGTFKFTVNDTNCRYYYCATGPHCQRGQVMTINW
Coding >Ophio5|3551
ATGAAGAAGATGAATCGGTCCGTCGTGGCCGGCCTTTTGACGGCCCTGGTCTGCGTCGTCGTGGCCGAGCCTCTG
ACCATCGACCTTACTGGCGACCAGCCCAAGGTGATCAACGGAGGCCAAACCATCGCCATCGGGAACGATCAAGGA
GGGAGCAACGGCAAGGAAGCGCAAGGAAGAGGAGGCAGTGTGAAGAGCGGTGCAGGCTCGGTCAGTAACGCCGCG
GGCGGACAACGACAAGACTTTACCGTCGTGGCCGGTGGAGGCGCCGACATCTACGCGCCCAACTTCCTCAATGCC
GCCGTCGGCAGCACCGTCACCGTCCAGTTCAACACGGGGAACCATACCGTTACCGAGGGCTTTGCCGGCCAGGCT
TGTAGACCGTTGCAGGCAAAGGACCCCAAGGCCCTTCACAGTGGACATATCCCCTTTGCTCTGGGCCAGCAGACG
GTGGGCACTTTCAAGTTTACCGTCAACGACACCAACTGCAGGTATTATTACTGCGCGACGGGCCCTCACTGCCAG
AGAGGTCAGGTCATGACGATCAACTGG
Transcript >Ophio5|3551
ATGAAGAAGATGAATCGGTCCGTCGTGGCCGGCCTTTTGACGGCCCTGGTCTGCGTCGTCGTGGCCGAGCCTCTG
ACCATCGACCTTACTGGCGACCAGCCCAAGGTGATCAACGGAGGCCAAACCATCGCCATCGGGAACGATCAAGGA
GGGAGCAACGGCAAGGAAGCGCAAGGAAGAGGAGGCAGTGTGAAGAGCGGTGCAGGCTCGGTCAGTAACGCCGCG
GGCGGACAACGACAAGACTTTACCGTCGTGGCCGGTGGAGGCGCCGACATCTACGCGCCCAACTTCCTCAATGCC
GCCGTCGGCAGCACCGTCACCGTCCAGTTCAACACGGGGAACCATACCGTTACCGAGGGCTTTGCCGGCCAGGCT
TGTAGACCGTTGCAGGCAAAGGACCCCAAGGCCCTTCACAGTGGACATATCCCCTTTGCTCTGGGCCAGCAGACG
GTGGGCACTTTCAAGTTTACCGTCAACGACACCAACTGCAGGTATTATTACTGCGCGACGGGCCCTCACTGCCAG
AGAGGTCAGGTCATGACGATCAACTGGTGA
Gene >Ophio5|3551
ATGAAGAAGATGAATCGGTCCGTCGTGGCCGGCCTTTTGACGGCCCTGGTCTGCGTCGTCGTGGCCGAGCCTCTG
ACCATCGACCTTACTGGCGACCAGCCCAAGGTGATCAACGGAGGCCAAACCATCGCCATCGGGAACGATCAAGGA
GGGAGCAACGGCAAGGAAGCGCAAGGAAGAGGAGGCAGTGTGAAGAGCGGTGCAGGCTCGGTCAGTAACGCCGCG
GGCGGACAACGACAAGACTTTACCGTCGTGGCCGGTGGAGGCGCCGACATCTACGCGCCCAACTTCCTCAATGCC
GCCGTCGGCAGCACCGTCACCGTCCAGTTCAACACGGGGAACCATACCGTTACCGAGGGCTTTGCCGGCCAGGCT
TGTAGACCGTTGCAGGCAAAGGACCCCAAGGCCCTTCACAGTGGACATATCCCCTTTGCTCTGGGCCAGCAGACG
GTGGGCACTTTCAAGTTTACCGTCAACGACACCAACTGCAGGTATTATTACTGCGCGACGGGCCCTCACTGCCAG
AGAGGTCAGGTCATGACGATCAACTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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