Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3536
Gene name
Locationscaffold_28:48428..49676
Strand+
Gene length (bp)1248
Transcript length (bp)1170
Coding sequence length (bp)1167
Protein length (aa) 389

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

Domain # Start End Length
1 168 190 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3536
MVSSMYHQRSSNSSGSSLPTMRTMSIITQYSDAYNPGALPKGPLRVPKRQSRRDPALSAYHQPPYVSPEPSLSAE
KEPSAEQEPSAEKEPSAEKELAAEKDLSAERGLSAEKDHAAAESEEIDPTVSPPRAGSGSGGSSRSGSSGSSNSS
IREDDKGPFAHRRRAGRFLVVVAVVAIIIVALAIGLTVGLRRNSSNSDPFGLGVDFPAGSYAFRAELKTTQTGCT
SQASTWRCDSSKNGASTTAHWDIRPRGHGAFTISSPNDSELNPAFSDVSLRVMDATLPTERLIFTLPMNKTVVPA
SGSSPTSRAAQCLYQNVELEATLYTRQRGGRSFSAPSQLGQGADWPGDVEITQRMPSTIGQPTCKDSSGVQIADV
QASQGNCACVYSTN
Coding >Ophio5|3536
ATGGTATCTTCCATGTATCACCAGCGGTCCTCCAACTCCTCGGGGTCGTCGCTTCCGACCATGCGGACCATGTCC
ATCATCACGCAGTATAGCGACGCCTACAACCCGGGGGCCCTGCCCAAAGGCCCGCTCCGGGTGCCCAAGAGGCAG
TCTCGCCGAGACCCGGCCCTCAGCGCTTATCATCAGCCTCCCTACGTGTCGCCCGAGCCGAGCCTCAGTGCGGAG
AAGGAGCCGAGTGCGGAGCAGGAGCCGAGTGCAGAGAAGGAGCCGAGTGCAGAGAAGGAGCTGGCTGCGGAGAAG
GACTTGAGTGCGGAAAGGGGGCTGAGTGCGGAGAAGGACCATGCTGCTGCCGAGTCGGAAGAGATCGACCCGACG
GTTTCGCCTCCTCGGGCAGGCAGCGGCAGTGGCGGCAGCAGCCGAAGCGGTAGCAGCGGCAGCAGCAACAGCAGC
ATCCGGGAGGACGACAAGGGTCCATTCGCTCACAGGAGGAGGGCTGGTCGGTTTCTCGTCGTCGTCGCCGTCGTT
GCCATCATCATCGTCGCCTTGGCTATCGGGCTCACGGTCGGACTGAGAAGAAACAGCAGCAACAGCGATCCGTTT
GGGTTGGGTGTAGACTTTCCCGCCGGGTCTTATGCCTTCAGGGCAGAGCTCAAGACGACGCAGACTGGCTGCACC
TCTCAAGCCTCCACATGGCGCTGCGACTCGTCCAAAAACGGCGCCTCGACAACCGCACATTGGGATATCCGGCCC
CGAGGCCACGGGGCTTTTACCATATCCTCCCCCAACGACAGCGAGTTGAATCCGGCCTTCTCCGACGTCAGCTTG
AGAGTCATGGACGCCACCCTACCGACAGAGCGGCTCATCTTCACACTACCAATGAACAAGACCGTCGTTCCAGCC
AGCGGCTCTTCGCCAACCAGCCGCGCTGCCCAGTGCCTCTATCAAAACGTCGAACTAGAGGCGACGCTCTACACG
CGACAGCGCGGCGGCCGAAGCTTCTCAGCACCCAGCCAGCTCGGCCAGGGCGCCGACTGGCCCGGCGACGTCGAG
ATCACCCAGCGCATGCCCTCGACCATCGGCCAACCGACATGCAAGGACAGCAGCGGCGTCCAGATCGCCGATGTC
CAGGCCTCTCAGGGCAATTGCGCCTGTGTCTACTCTACTAAT
Transcript >Ophio5|3536
ATGGTATCTTCCATGTATCACCAGCGGTCCTCCAACTCCTCGGGGTCGTCGCTTCCGACCATGCGGACCATGTCC
ATCATCACGCAGTATAGCGACGCCTACAACCCGGGGGCCCTGCCCAAAGGCCCGCTCCGGGTGCCCAAGAGGCAG
TCTCGCCGAGACCCGGCCCTCAGCGCTTATCATCAGCCTCCCTACGTGTCGCCCGAGCCGAGCCTCAGTGCGGAG
AAGGAGCCGAGTGCGGAGCAGGAGCCGAGTGCAGAGAAGGAGCCGAGTGCAGAGAAGGAGCTGGCTGCGGAGAAG
GACTTGAGTGCGGAAAGGGGGCTGAGTGCGGAGAAGGACCATGCTGCTGCCGAGTCGGAAGAGATCGACCCGACG
GTTTCGCCTCCTCGGGCAGGCAGCGGCAGTGGCGGCAGCAGCCGAAGCGGTAGCAGCGGCAGCAGCAACAGCAGC
ATCCGGGAGGACGACAAGGGTCCATTCGCTCACAGGAGGAGGGCTGGTCGGTTTCTCGTCGTCGTCGCCGTCGTT
GCCATCATCATCGTCGCCTTGGCTATCGGGCTCACGGTCGGACTGAGAAGAAACAGCAGCAACAGCGATCCGTTT
GGGTTGGGTGTAGACTTTCCCGCCGGGTCTTATGCCTTCAGGGCAGAGCTCAAGACGACGCAGACTGGCTGCACC
TCTCAAGCCTCCACATGGCGCTGCGACTCGTCCAAAAACGGCGCCTCGACAACCGCACATTGGGATATCCGGCCC
CGAGGCCACGGGGCTTTTACCATATCCTCCCCCAACGACAGCGAGTTGAATCCGGCCTTCTCCGACGTCAGCTTG
AGAGTCATGGACGCCACCCTACCGACAGAGCGGCTCATCTTCACACTACCAATGAACAAGACCGTCGTTCCAGCC
AGCGGCTCTTCGCCAACCAGCCGCGCTGCCCAGTGCCTCTATCAAAACGTCGAACTAGAGGCGACGCTCTACACG
CGACAGCGCGGCGGCCGAAGCTTCTCAGCACCCAGCCAGCTCGGCCAGGGCGCCGACTGGCCCGGCGACGTCGAG
ATCACCCAGCGCATGCCCTCGACCATCGGCCAACCGACATGCAAGGACAGCAGCGGCGTCCAGATCGCCGATGTC
CAGGCCTCTCAGGGCAATTGCGCCTGTGTCTACTCTACTAATTAA
Gene >Ophio5|3536
ATGGTATCTTCCATGTATCACCAGCGGTCCTCCAACTCCTCGGGGTCGTCGCTTCCGACCATGCGGACCATGTCC
ATCATCACGCAGTATAGCGACGCCTACAACCCGGGGGCCCTGCCCAAAGGCCCGCTCCGGGTGCCCAAGAGGCAG
TCTCGCCGAGACCCGGCCCTCAGCGCTTATCATCAGCCTCCCTACGTGTCGCCCGAGCCGAGCCTCAGTGCGGAG
AAGGAGCCGAGTGCGGAGCAGGAGCCGAGTGCAGAGAAGGAGCCGAGTGCAGAGAAGGAGCTGGCTGCGGAGAAG
GACTTGAGTGCGGAAAGGGGGCTGAGTGCGGAGAAGGACCATGCTGCTGCCGAGTCGGAAGAGATCGACCCGACG
GTTTCGCCTCCTCGGGCAGGCAGCGGCAGTGGCGGCAGCAGCCGAAGCGGTAGCAGCGGCAGCAGCAACAGCAGC
ATCCGGGAGGACGACAAGGGTCCATTCGCTCACAGGAGGAGGGCTGGTCGGTTTCTCGTCGTCGTCGCCGTCGTT
GCCATCATCATCGTCGCCTTGGCTATCGGGCTCACGGTCGGACTGAGAAGAAAGTGAGTCTCGGTTACCGCCACC
ACCGTCTAGGGCCGATTTGCTGGCGAGTATCCTGGCTAATTCAGAGGCGAAAACAGCAGCAGCAACAGCGATCCG
TTTGGGTTGGGTGTAGACTTTCCCGCCGGGTCTTATGCCTTCAGGGCAGAGCTCAAGACGACGCAGACTGGCTGC
ACCTCTCAAGCCTCCACATGGCGCTGCGACTCGTCCAAAAACGGCGCCTCGACAACCGCACATTGGGATATCCGG
CCCCGAGGCCACGGGGCTTTTACCATATCCTCCCCCAACGACAGCGAGTTGAATCCGGCCTTCTCCGACGTCAGC
TTGAGAGTCATGGACGCCACCCTACCGACAGAGCGGCTCATCTTCACACTACCAATGAACAAGACCGTCGTTCCA
GCCAGCGGCTCTTCGCCAACCAGCCGCGCTGCCCAGTGCCTCTATCAAAACGTCGAACTAGAGGCGACGCTCTAC
ACGCGACAGCGCGGCGGCCGAAGCTTCTCAGCACCCAGCCAGCTCGGCCAGGGCGCCGACTGGCCCGGCGACGTC
GAGATCACCCAGCGCATGCCCTCGACCATCGGCCAACCGACATGCAAGGACAGCAGCGGCGTCCAGATCGCCGAT
GTCCAGGCCTCTCAGGGCAATTGCGCCTGTGTCTACTCTACTAATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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