Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3529
Gene name
Locationscaffold_28:27840..29397
Strand+
Gene length (bp)1557
Transcript length (bp)1371
Coding sequence length (bp)1368
Protein length (aa) 456

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3529
MRLGASSVLVACLCVLATGLAREGPDHELYARHRAPPHRFRMFRSASFGRMAHSRNAGSGGNAQQNSGFNDVGNF
QNLNGNGNGNGNGNRNNGGGNVQNLNGNGNGNNFQANNQGAGAVTVTQTLCSPNDRQTDIKVITETFTETKTVLA
NAAAATGVSGSQNANVINNGGFGPQNLNNNVNNPGGSNLQNGAIVNNNNNRSVNGNGGSAVVLSGQNQNGVIGNN
INNQGINGNGGSTVILSGQNQNGGGIALINGGGGNNAAVGNGVELINLSNQGVVNSGVRVVNGQSQCVINGVVMG
VLQDNNNNNNNQQAQSSVSQAANGNQGAALKTIPLANIGLSSPSTTLTTPPPSAATQPPQQQQQQQQQQQQQQQQ
QQQQQRQQQQQQQKQPPPPPPAQVQAPQDVQPPPAQASQSTAVPPPSNLAPPPPSNTAPPGGNSNNVVLSSGLDL
GALGPK
Coding >Ophio5|3529
ATGCGTCTCGGGGCTTCCAGCGTCCTGGTTGCATGCCTTTGTGTGCTGGCCACAGGGCTCGCTCGTGAAGGACCA
GATCACGAGCTGTATGCGAGGCATAGGGCCCCCCCCCACCGCTTTCGCATGTTCAGAAGTGCGAGCTTCGGTCGT
ATGGCCCATAGCCGAAATGCAGGTTCCGGAGGCAACGCCCAACAAAATTCAGGCTTTAACGACGTCGGCAATTTT
CAGAATCTCAACGGCAACGGCAACGGCAACGGCAACGGCAACCGCAACAATGGCGGTGGCAATGTTCAGAATCTC
AACGGCAACGGCAACGGCAACAACTTCCAAGCCAATAATCAGGGCGCCGGCGCCGTGACGGTGACGCAAACCCTT
TGTTCGCCGAACGATCGCCAAACCGACATCAAGGTCATCACAGAGACTTTTACCGAGACCAAGACCGTGCTTGCA
AATGCTGCCGCCGCCACCGGCGTCTCTGGGTCACAAAACGCCAATGTCATCAACAACGGCGGCTTTGGGCCACAA
AACTTGAACAACAATGTGAACAATCCCGGCGGCTCCAATCTTCAAAATGGCGCTATCGTCAACAACAATAACAAT
CGAAGCGTCAACGGCAACGGCGGCAGCGCCGTTGTCCTCTCCGGGCAGAATCAAAACGGCGTTATTGGCAACAAC
ATAAATAATCAAGGCATCAACGGCAACGGCGGCAGCACCGTTATCCTCTCCGGACAGAACCAAAACGGCGGTGGC
ATCGCCTTAATCAATGGCGGTGGTGGCAATAACGCCGCGGTGGGCAATGGTGTGGAGCTCATCAATCTTTCCAAT
CAGGGCGTCGTCAACAGCGGCGTCAGGGTCGTCAATGGTCAGAGCCAGTGCGTCATAAACGGAGTCGTCATGGGC
GTCCTCCAGGACAATAACAACAACAACAACAACCAACAGGCACAGTCTTCCGTCTCGCAAGCAGCGAATGGCAAC
CAGGGAGCGGCACTTAAGACTATACCTTTGGCCAATATCGGGCTCAGCTCCCCCTCCACGACCTTGACAACGCCG
CCGCCGTCTGCAGCTACGCAGCCGCCACAGCAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAG
CAGCAGCAGCAACAGCGGCAGCAGCAACAGCAGCAACAGAAGCAACCGCCGCCGCCGCCGCCGGCTCAGGTTCAG
GCCCCTCAGGATGTACAGCCTCCGCCGGCTCAGGCGTCCCAGTCGACGGCCGTTCCCCCCCCCAGCAACTTGGCC
CCTCCTCCTCCCAGCAACACGGCCCCCCCGGGGGGTAATTCGAATAACGTGGTACTGAGCTCCGGCCTTGACTTA
GGAGCTCTCGGGCCGAAA
Transcript >Ophio5|3529
ATGCGTCTCGGGGCTTCCAGCGTCCTGGTTGCATGCCTTTGTGTGCTGGCCACAGGGCTCGCTCGTGAAGGACCA
GATCACGAGCTGTATGCGAGGCATAGGGCCCCCCCCCACCGCTTTCGCATGTTCAGAAGTGCGAGCTTCGGTCGT
ATGGCCCATAGCCGAAATGCAGGTTCCGGAGGCAACGCCCAACAAAATTCAGGCTTTAACGACGTCGGCAATTTT
CAGAATCTCAACGGCAACGGCAACGGCAACGGCAACGGCAACCGCAACAATGGCGGTGGCAATGTTCAGAATCTC
AACGGCAACGGCAACGGCAACAACTTCCAAGCCAATAATCAGGGCGCCGGCGCCGTGACGGTGACGCAAACCCTT
TGTTCGCCGAACGATCGCCAAACCGACATCAAGGTCATCACAGAGACTTTTACCGAGACCAAGACCGTGCTTGCA
AATGCTGCCGCCGCCACCGGCGTCTCTGGGTCACAAAACGCCAATGTCATCAACAACGGCGGCTTTGGGCCACAA
AACTTGAACAACAATGTGAACAATCCCGGCGGCTCCAATCTTCAAAATGGCGCTATCGTCAACAACAATAACAAT
CGAAGCGTCAACGGCAACGGCGGCAGCGCCGTTGTCCTCTCCGGGCAGAATCAAAACGGCGTTATTGGCAACAAC
ATAAATAATCAAGGCATCAACGGCAACGGCGGCAGCACCGTTATCCTCTCCGGACAGAACCAAAACGGCGGTGGC
ATCGCCTTAATCAATGGCGGTGGTGGCAATAACGCCGCGGTGGGCAATGGTGTGGAGCTCATCAATCTTTCCAAT
CAGGGCGTCGTCAACAGCGGCGTCAGGGTCGTCAATGGTCAGAGCCAGTGCGTCATAAACGGAGTCGTCATGGGC
GTCCTCCAGGACAATAACAACAACAACAACAACCAACAGGCACAGTCTTCCGTCTCGCAAGCAGCGAATGGCAAC
CAGGGAGCGGCACTTAAGACTATACCTTTGGCCAATATCGGGCTCAGCTCCCCCTCCACGACCTTGACAACGCCG
CCGCCGTCTGCAGCTACGCAGCCGCCACAGCAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAG
CAGCAGCAGCAACAGCGGCAGCAGCAACAGCAGCAACAGAAGCAACCGCCGCCGCCGCCGCCGGCTCAGGTTCAG
GCCCCTCAGGATGTACAGCCTCCGCCGGCTCAGGCGTCCCAGTCGACGGCCGTTCCCCCCCCCAGCAACTTGGCC
CCTCCTCCTCCCAGCAACACGGCCCCCCCGGGGGGTAATTCGAATAACGTGGTACTGAGCTCCGGCCTTGACTTA
GGAGCTCTCGGGCCGAAATAG
Gene >Ophio5|3529
ATGCGTCTCGGGGCTTCCAGCGTCCTGGTTGCATGCCTTTGTGTGCTGGTAGCCGCCTCCCTCCTCATGTCGTTG
TCCTTTTCCCGCTTGGCTGACTCTAGGGATTAGGCCACAGGGCTCGCTCGTGAAGGACCAGATCACGAGCTGTAT
GCGAGGCATAGGGCCCCCCCCCACCGCTTTCGCATGTTCAGAAGTGCGAGCTTCGGTCGTATGGCCCATAGCCGA
AATGCAGGTTCCGGAGGCAACGCCCAACAAAATTCAGGCTTTAACGACGTCGGCAATTTTCAGAATCTCAACGGC
AACGGCAACGGCAACGGCAACGGCAACCGCAACAATGGCGGTGGCAATGTTCAGAATCTCAACGGCAACGGCAAC
GGCAACAACTTCCAAGCCAATAATCAGGGCGCCGGCGCCGTGACGGTGACGCAAACCCTTTGTTCGGTAAGATCC
TCGAGACTGTGGATGACCATTTCGACGAGCCCGCTAACGTAGAGAAGCCGAACGATCGCCAAACCGACATCAAGG
TCATCACAGAGACTTTTACCGAGACCAAGACCGTGCTTGCAAATGCTGTATGTATCAGGCGTCTATATCCTTGTC
AGTCAGACCAGAAGCGTATGTACTGACTCTGGGCAACAACAGGCCGCCGCCACCGGCGTCTCTGGGTCACAAAAC
GCCAATGTCATCAACAACGGCGGCTTTGGGCCACAAAACTTGAACAACAATGTGAACAATCCCGGCGGCTCCAAT
CTTCAAAATGGCGCTATCGTCAACAACAATAACAATCGAAGCGTCAACGGCAACGGCGGCAGCGCCGTTGTCCTC
TCCGGGCAGAATCAAAACGGCGTTATTGGCAACAACATAAATAATCAAGGCATCAACGGCAACGGCGGCAGCACC
GTTATCCTCTCCGGACAGAACCAAAACGGCGGTGGCATCGCCTTAATCAATGGCGGTGGTGGCAATAACGCCGCG
GTGGGCAATGGTGTGGAGCTCATCAATCTTTCCAATCAGGGCGTCGTCAACAGCGGCGTCAGGGTCGTCAATGGT
CAGAGCCAGTGCGTCATAAACGGAGTCGTCATGGGCGTCCTCCAGGACAATAACAACAACAACAACAACCAACAG
GCACAGTCTTCCGTCTCGCAAGCAGCGAATGGCAACCAGGGAGCGGCACTTAAGACTATACCTTTGGCCAATATC
GGGCTCAGCTCCCCCTCCACGACCTTGACAACGCCGCCGCCGTCTGCAGCTACGCAGCCGCCACAGCAACAGCAG
CAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAGCGGCAGCAGCAACAGCAGCAACAG
AAGCAACCGCCGCCGCCGCCGCCGGCTCAGGTTCAGGCCCCTCAGGATGTACAGCCTCCGCCGGCTCAGGCGTCC
CAGTCGACGGCCGTTCCCCCCCCCAGCAACTTGGCCCCTCCTCCTCCCAGCAACACGGCCCCCCCGGGGGGTAAT
TCGAATAACGTGGTACTGAGCTCCGGCCTTGACTTAGGAGCTCTCGGGCCGAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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