Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3527
Gene name
Locationscaffold_28:25177..26335
Strand-
Gene length (bp)1158
Transcript length (bp)1002
Coding sequence length (bp)999
Protein length (aa) 333

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06966 DUF1295 Protein of unknown function (DUF1295) 3.0E-56 27 265
PF02544 Steroid_dh 3-oxo-5-alpha-steroid 4-dehydrogenase 3.5E-06 144 210

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0071704 organic substance metabolic process No
GO:0016491 oxidoreductase activity No
GO:0044238 primary metabolic process No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 10 29 19
2 41 58 17
3 68 90 22
4 103 125 22
5 140 162 22
6 191 213 22
7 223 245 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3527
MATVHVLDNYYLAITALVTIAYQLLFFSFAYTFKFDKLTDLAGGSNFAVLAILTISLSGHHHARQVVASLFLIIW
AVRLSGFLFFRILQTGSDDRFDDKRDKFFPFLGFWVFQMLWVWTVSLPVTVLNSPNVTQYPQHAFGTGRDIAGIV
LFIIGFLMEAVSDVQKYRFRQSHDGSAVCDKGLFAVSRHPNYFGEIIIQFSIFMIAVSSAADGYVGGQAYKALYA
TILGPFFLTLLLMFVSGLPLSERPKAKARYEKGNNWFEYQGWLQRTSILIPFPPQLYARLPIFLKRTVFLEFPMY
VFDPAKHSDHSLPGGDSETADGRGRQSGEERLM
Coding >Ophio5|3527
ATGGCAACCGTTCACGTGCTGGACAACTACTACCTCGCCATCACGGCCCTCGTCACCATCGCCTACCAGCTCCTC
TTCTTCTCCTTCGCCTACACCTTCAAATTCGACAAGTTAACCGACCTCGCCGGCGGCTCCAACTTTGCCGTCCTC
GCAATCCTCACCATCTCCCTCTCCGGCCATCATCATGCCCGCCAAGTCGTAGCCTCTCTCTTCCTCATCATCTGG
GCCGTTCGCCTTTCTGGCTTCCTCTTCTTTCGCATCCTGCAAACCGGCTCCGACGACCGCTTCGACGACAAGCGC
GACAAGTTCTTCCCCTTTCTCGGCTTCTGGGTCTTTCAGATGCTCTGGGTTTGGACTGTTTCCCTCCCTGTCACC
GTGCTCAACTCTCCCAACGTCACGCAGTACCCGCAGCATGCCTTTGGCACCGGAAGAGACATTGCCGGCATCGTC
CTTTTCATCATCGGCTTTCTCATGGAGGCTGTTAGCGATGTGCAAAAGTATAGGTTTCGCCAGTCGCACGACGGA
AGTGCCGTTTGCGACAAGGGCCTCTTTGCCGTCTCACGACATCCCAACTACTTTGGCGAGATCATCATTCAATTC
TCTATATTCATGATAGCCGTCTCCTCTGCCGCTGACGGCTATGTCGGCGGCCAAGCCTACAAGGCTTTATACGCC
ACCATCCTCGGCCCCTTTTTCCTCACCCTCTTGCTCATGTTTGTTTCCGGCCTGCCGCTGTCGGAGCGGCCCAAG
GCCAAGGCACGTTACGAAAAGGGAAATAACTGGTTCGAGTACCAAGGCTGGCTCCAGCGCACCAGTATACTCATT
CCCTTCCCGCCACAGCTCTACGCCAGGCTTCCCATTTTCCTCAAGCGCACCGTCTTCCTCGAGTTCCCCATGTAT
GTCTTCGACCCGGCCAAACACTCGGATCACTCTCTCCCGGGAGGCGACTCTGAGACGGCCGATGGGCGGGGCAGA
CAGAGCGGCGAGGAGAGGTTAATG
Transcript >Ophio5|3527
ATGGCAACCGTTCACGTGCTGGACAACTACTACCTCGCCATCACGGCCCTCGTCACCATCGCCTACCAGCTCCTC
TTCTTCTCCTTCGCCTACACCTTCAAATTCGACAAGTTAACCGACCTCGCCGGCGGCTCCAACTTTGCCGTCCTC
GCAATCCTCACCATCTCCCTCTCCGGCCATCATCATGCCCGCCAAGTCGTAGCCTCTCTCTTCCTCATCATCTGG
GCCGTTCGCCTTTCTGGCTTCCTCTTCTTTCGCATCCTGCAAACCGGCTCCGACGACCGCTTCGACGACAAGCGC
GACAAGTTCTTCCCCTTTCTCGGCTTCTGGGTCTTTCAGATGCTCTGGGTTTGGACTGTTTCCCTCCCTGTCACC
GTGCTCAACTCTCCCAACGTCACGCAGTACCCGCAGCATGCCTTTGGCACCGGAAGAGACATTGCCGGCATCGTC
CTTTTCATCATCGGCTTTCTCATGGAGGCTGTTAGCGATGTGCAAAAGTATAGGTTTCGCCAGTCGCACGACGGA
AGTGCCGTTTGCGACAAGGGCCTCTTTGCCGTCTCACGACATCCCAACTACTTTGGCGAGATCATCATTCAATTC
TCTATATTCATGATAGCCGTCTCCTCTGCCGCTGACGGCTATGTCGGCGGCCAAGCCTACAAGGCTTTATACGCC
ACCATCCTCGGCCCCTTTTTCCTCACCCTCTTGCTCATGTTTGTTTCCGGCCTGCCGCTGTCGGAGCGGCCCAAG
GCCAAGGCACGTTACGAAAAGGGAAATAACTGGTTCGAGTACCAAGGCTGGCTCCAGCGCACCAGTATACTCATT
CCCTTCCCGCCACAGCTCTACGCCAGGCTTCCCATTTTCCTCAAGCGCACCGTCTTCCTCGAGTTCCCCATGTAT
GTCTTCGACCCGGCCAAACACTCGGATCACTCTCTCCCGGGAGGCGACTCTGAGACGGCCGATGGGCGGGGCAGA
CAGAGCGGCGAGGAGAGGTTAATGTGA
Gene >Ophio5|3527
ATGGCAACCGTTCACGTGCTGGACAACTACTACCTCGCCATCACGGCCCTCGTCACCATCGCCTACCAGCTCCTC
TTCTTCTCCTTCGCCTACACCTTCAAATTCGACAAGTTAACCGGTTCGCTTTCCCTCCTCTTCCTTTCGCAATCC
ATAAAAAGGCCCCCCATCACCCCCCCCCCAAAAAAAAAGGGGGAAAAGGAGCTCACAATATCGCAGACCTCGCCG
GCGGCTCCAACTTTGCCGTCCTCGCAATCCTCACCATCTCCCTCTCCGGCCATCATCATGCCCGCCAAGTCGTAG
CCTCTCTCTTCCTCATCATCTGGGCCGTTCGCCTTTCTGGCTTCCTCTTCTTTCGCATCCTGCAAACCGGCTCCG
ACGACCGCTTCGACGACAAGCGCGACAAGTTCTTCCCCTTTCTCGGCTTCTGGGTCTTTCAGATGCTCTGGGTTT
GGACTGTTTCCCTCCCTGTCACCGTGCTCAACTCTCCCAACGTCACGCAGTACCCGCAGCATGCCTTTGGCACCG
GAAGAGACATTGCCGGCATCGTCCTTTTCATCATCGGCTTTCTCATGGAGGCTGTTAGCGATGTGCAAAAGTATA
GGTTTCGCCAGTCGCACGACGGAAGTGCCGTTTGCGACAAGGGCCTCTTTGCCGTCTCACGACATCCCAACTACT
TTGGCGAGATCATCATTCAATTCTGTGAGGGCACCTTCTGTCCTCTTGGTTGGACTCGGCTAATGCAGGGGGCGC
ACCACAGCTATATTCATGATAGCCGTCTCCTCTGCCGCTGACGGCTATGTCGGCGGCCAAGCCTACAAGGCTTTA
TACGCCACCATCCTCGGCCCCTTTTTCCTCACCCTCTTGCTCATGTTTGTTTCCGGCCTGCCGCTGTCGGAGCGG
CCCAAGGCCAAGGCACGTTACGAAAAGGGAAATAACTGGTTCGAGTACCAAGGCTGGCTCCAGCGCACCAGTATA
CTCATTCCCTTCCCGCCACAGCTCTACGCCAGGCTTCCCATTTTCCTCAAGCGCACCGTCTTCCTCGAGTTCCCC
ATGTATGTCTTCGACCCGGCCAAACACTCGGATCACTCTCTCCCGGGAGGCGACTCTGAGACGGCCGATGGGCGG
GGCAGACAGAGCGGCGAGGAGAGGTTAATGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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