Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3522
Gene name
Locationscaffold_28:7003..8222
Strand+
Gene length (bp)1219
Transcript length (bp)1095
Coding sequence length (bp)1092
Protein length (aa) 364

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03151 TPT Triose-phosphate Transporter family 8.8E-34 58 341

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1 61 364 1.0E-24
sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=1 SV=1 32 353 4.0E-23
sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1 61 364 8.0E-23
sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1 79 349 2.0E-19
sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1 53 364 1.0E-18
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Swissprot ID Swissprot Description Start End E-value
sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1 61 364 1.0E-24
sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=1 SV=1 32 353 4.0E-23
sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1 61 364 8.0E-23
sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1 79 349 2.0E-19
sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1 53 364 1.0E-18
sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1 79 348 1.0E-18
sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1 2 352 2.0E-18
sp|Q8H184|PT106_ARATH Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1 61 363 8.0E-17
sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1 52 346 1.0E-16
sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1 55 362 3.0E-16
sp|Q9LF61|XPT_ARATH Xylulose 5-phosphate/phosphate translocator, chloroplastic OS=Arabidopsis thaliana GN=XPT PE=1 SV=1 3 349 1.0E-15
sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1 70 352 3.0E-15
sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1 55 362 9.0E-15
sp|Q9M5A9|GPT1_ARATH Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1 26 345 1.0E-14
sp|Q94B38|GPT2_ARATH Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=2 20 344 2.0E-14
sp|Q1JQ66|S35E3_DANRE Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1 65 363 6.0E-14
sp|Q69VR7|PPT1_ORYSJ Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT1 PE=2 SV=1 2 342 1.0E-13
sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1 60 355 2.0E-13
sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic OS=Arabidopsis thaliana GN=TPT PE=1 SV=1 8 355 5.0E-13
sp|Q8CD26|S35E1_MOUSE Solute carrier family 35 member E1 OS=Mus musculus GN=Slc35e1 PE=1 SV=2 115 353 6.0E-13
sp|P0C6B1|S35E1_RAT Solute carrier family 35 member E1 OS=Rattus norvegicus GN=Slc35e1 PE=3 SV=1 115 353 2.0E-12
sp|P52177|TPT1_BRAOB Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1 54 355 2.0E-12
sp|Q96K37|S35E1_HUMAN Solute carrier family 35 member E1 OS=Homo sapiens GN=SLC35E1 PE=1 SV=2 115 353 2.0E-12
sp|Q84QU8|PPT2_ORYSJ Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT2 PE=2 SV=1 44 342 3.0E-12
sp|Q550W6|FUCT1_DICDI GDP-fucose transporter 1 OS=Dictyostelium discoideum GN=slc35c1 PE=3 SV=1 61 350 8.0E-12
sp|Q8H0T6|PPT2_ARATH Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=PPT2 PE=2 SV=1 59 353 8.0E-12
sp|Q8RXL8|Y1689_ARATH Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1 79 362 2.0E-11
sp|P29463|TPT_SOLTU Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1 61 355 2.0E-11
sp|P11869|TPT_SPIOL Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1 8 353 2.0E-11
sp|Q6PGC7|S35E3_MOUSE Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1 65 363 2.0E-11
sp|Q5VQL3|PPT3_ORYSJ Phosphoenolpyruvate/phosphate translocator 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT3 PE=2 SV=1 61 351 3.0E-11
sp|O94695|YG1B_SCHPO Putative transporter C83.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC83.11 PE=1 SV=2 136 347 6.0E-11
sp|P49131|TPT_FLAPR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1 7 355 6.0E-11
sp|P0CK96|S352B_HUMAN Solute carrier family 35 member E2B OS=Homo sapiens GN=SLC35E2B PE=2 SV=1 128 359 7.0E-11
sp|A4IFK2|S35E3_BOVIN Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1 65 363 8.0E-11
sp|Q9FTT3|TPT_ORYSJ Triose phosphate/phosphate translocator TPT, chloroplastic OS=Oryza sativa subsp. japonica GN=TPT PE=2 SV=1 14 352 1.0E-10
sp|P49133|TPT_MAIZE Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1 61 353 3.0E-10
sp|P49132|TPT_FLATR Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1 7 355 3.0E-10
sp|Q9VR50|S35E1_DROME Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1 73 362 7.0E-10
sp|Q10354|YDB1_SCHPO Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2 17 360 8.0E-10
sp|Q9NQQ7|S35C2_HUMAN Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1 SV=2 61 363 1.0E-09
sp|P52178|TPT2_BRAOB Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1 61 219 2.0E-09
sp|Q8C811|S35E2_MOUSE Solute carrier family 35 member E2 OS=Mus musculus GN=Slc35e2 PE=2 SV=1 51 359 3.0E-09
sp|Q8RXN3|PPT1_ARATH Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PPT1 PE=1 SV=1 61 198 5.0E-09
sp|Q7Z769|S35E3_HUMAN Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1 65 363 5.0E-09
sp|Q9LNH5|PT148_ARATH Probable sugar phosphate/phosphate translocator At1g48230 OS=Arabidopsis thaliana GN=At1g48230 PE=2 SV=2 70 362 4.0E-08
sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1 79 353 7.0E-08
sp|Q5M8T2|S35D3_HUMAN Solute carrier family 35 member D3 OS=Homo sapiens GN=SLC35D3 PE=2 SV=1 79 364 2.0E-07
sp|Q6ICL7|S35E4_HUMAN Solute carrier family 35 member E4 OS=Homo sapiens GN=SLC35E4 PE=2 SV=1 72 344 5.0E-07
sp|Q9C8M1|PT153_ARATH Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2 71 364 6.0E-07
sp|Q8K3D6|S35E4_MOUSE Solute carrier family 35 member E4 OS=Mus musculus GN=Slc35e4 PE=2 SV=2 119 352 7.0E-07
sp|Q5RKL7|S35E4_RAT Solute carrier family 35 member E4 OS=Rattus norvegicus GN=Slc35e4 PE=2 SV=1 72 344 7.0E-07
sp|Q8BGF8|S35D3_MOUSE Solute carrier family 35 member D3 OS=Mus musculus GN=Slc35d3 PE=2 SV=1 79 362 2.0E-06
sp|Q8VCX2|S35C2_MOUSE Solute carrier family 35 member C2 OS=Mus musculus GN=Slc35c2 PE=1 SV=1 61 354 2.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.5

Transmembrane Domains

Domain # Start End Length
1 57 79 22
2 84 106 22
3 118 140 22
4 145 164 19
5 171 193 22
6 197 214 17
7 235 254 19
8 264 286 22
9 293 315 22
10 320 342 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3522
MARQSGDEPVALLTPEEQDGEFKTDVRDVESEADSEPLPNHNLDHEYSIPSTVKFTWLGTYFFFSLLLTLYNKLV
LGMFSFPWLLTCLHASFASLGTYVMMNMGYFKLSRLGRREYLALLAFSALFTANIALSNLSLAMVSVPFYQTMRM
LCPIFTILIYRVWYSRTYSGMTYLSLVPLIIGAAMTTAGEMTFSDAGFLLTILGVILAAVKTVVTNRFMTGSLSL
PPIEFLMRMSPLAALQALACATVTGEVAGFRDLITSGNIALGPALASLGGNGFLAFLLNIASFQTNKLAGALTMT
VCGNLKQCLTVLIGIFMFRITVDMLNGAGMAVTMIGAAIYSKAELDNRRKNRQPAYQALEQKPR
Coding >Ophio5|3522
ATGGCTCGCCAGAGCGGCGACGAGCCCGTGGCCCTCCTGACGCCCGAGGAGCAAGACGGCGAGTTCAAAACAGAC
GTTCGCGACGTCGAGAGTGAGGCCGATTCCGAACCTCTACCAAATCACAACCTCGATCATGAGTATTCTATCCCC
AGCACTGTCAAGTTCACATGGCTGGGCACCTACTTCTTCTTTTCCTTGCTGCTCACCCTCTATAATAAGCTCGTT
CTGGGCATGTTTTCCTTTCCCTGGCTTCTCACCTGTCTGCATGCCTCTTTTGCCAGCCTGGGCACATACGTCATG
ATGAACATGGGCTACTTCAAACTGTCGCGACTGGGACGCCGGGAGTACTTGGCTCTCCTCGCCTTCAGCGCTCTC
TTCACGGCCAACATCGCTCTCTCGAACCTTTCCCTTGCCATGGTGTCGGTGCCCTTTTACCAGACGATGCGCATG
CTGTGTCCCATCTTCACCATTCTCATCTACCGCGTCTGGTACAGTCGCACCTACAGCGGCATGACGTACCTTTCT
CTGGTTCCCCTCATCATCGGCGCCGCCATGACGACGGCGGGCGAGATGACGTTTAGTGATGCTGGCTTCCTCCTC
ACCATACTCGGTGTCATCCTCGCCGCAGTCAAGACGGTTGTCACCAATCGATTCATGACGGGATCGCTGTCCCTG
CCTCCTATCGAATTCCTTATGCGCATGTCGCCTCTCGCCGCCCTGCAAGCACTGGCATGCGCTACCGTGACGGGC
GAGGTGGCTGGTTTCCGTGACCTCATCACCTCGGGCAATATCGCCCTCGGCCCCGCTTTGGCGTCGCTGGGTGGC
AACGGCTTCCTTGCCTTTCTCCTCAATATTGCGTCCTTTCAAACGAACAAGCTGGCCGGCGCCTTGACGATGACG
GTGTGCGGCAACTTGAAGCAGTGTCTGACGGTCTTGATTGGCATCTTCATGTTCAGGATCACTGTGGACATGCTC
AACGGGGCGGGCATGGCCGTGACCATGATTGGCGCCGCCATCTATAGCAAGGCTGAGTTGGACAACAGGAGGAAA
AACCGGCAACCGGCATATCAGGCCCTGGAGCAGAAGCCCAGG
Transcript >Ophio5|3522
ATGGCTCGCCAGAGCGGCGACGAGCCCGTGGCCCTCCTGACGCCCGAGGAGCAAGACGGCGAGTTCAAAACAGAC
GTTCGCGACGTCGAGAGTGAGGCCGATTCCGAACCTCTACCAAATCACAACCTCGATCATGAGTATTCTATCCCC
AGCACTGTCAAGTTCACATGGCTGGGCACCTACTTCTTCTTTTCCTTGCTGCTCACCCTCTATAATAAGCTCGTT
CTGGGCATGTTTTCCTTTCCCTGGCTTCTCACCTGTCTGCATGCCTCTTTTGCCAGCCTGGGCACATACGTCATG
ATGAACATGGGCTACTTCAAACTGTCGCGACTGGGACGCCGGGAGTACTTGGCTCTCCTCGCCTTCAGCGCTCTC
TTCACGGCCAACATCGCTCTCTCGAACCTTTCCCTTGCCATGGTGTCGGTGCCCTTTTACCAGACGATGCGCATG
CTGTGTCCCATCTTCACCATTCTCATCTACCGCGTCTGGTACAGTCGCACCTACAGCGGCATGACGTACCTTTCT
CTGGTTCCCCTCATCATCGGCGCCGCCATGACGACGGCGGGCGAGATGACGTTTAGTGATGCTGGCTTCCTCCTC
ACCATACTCGGTGTCATCCTCGCCGCAGTCAAGACGGTTGTCACCAATCGATTCATGACGGGATCGCTGTCCCTG
CCTCCTATCGAATTCCTTATGCGCATGTCGCCTCTCGCCGCCCTGCAAGCACTGGCATGCGCTACCGTGACGGGC
GAGGTGGCTGGTTTCCGTGACCTCATCACCTCGGGCAATATCGCCCTCGGCCCCGCTTTGGCGTCGCTGGGTGGC
AACGGCTTCCTTGCCTTTCTCCTCAATATTGCGTCCTTTCAAACGAACAAGCTGGCCGGCGCCTTGACGATGACG
GTGTGCGGCAACTTGAAGCAGTGTCTGACGGTCTTGATTGGCATCTTCATGTTCAGGATCACTGTGGACATGCTC
AACGGGGCGGGCATGGCCGTGACCATGATTGGCGCCGCCATCTATAGCAAGGCTGAGTTGGACAACAGGAGGAAA
AACCGGCAACCGGCATATCAGGCCCTGGAGCAGAAGCCCAGGTAG
Gene >Ophio5|3522
ATGGCTCGCCAGAGCGGCGACGAGCCCGTGGCCCTCCTGACGCCCGAGGAGCAAGACGGCGAGTTCAAAACAGAC
GTTCGCGACGTCGAGAGTGAGGCCGATTCCGAACCTCTACCAAATCACAACCTCGATCATGAGTATTCTATCCCC
AGCACTGTCAAGTTCACATGGCTGGGCACCTACTTCTTCTTTTCCTTGCTGCTCACCCTCTATAATAAGCTCGTT
CTGGGCATGGTCAGTCTGCTCCCTACTCGCCGTGGGAAACTGGTTTGCTGACGCTGGTTCTCGTCGCAGTTTTCC
TTTCCCTGGCTTCTCACCTGTCTGCATGCCTCTTTTGCCAGCCTGGGCACATACGTCATGATGAACATGGGCTAC
TTCAAACTGTCGCGACTGGGACGCCGGGAGTACTTGGCTCTCCTCGCCTTCAGCGCTCTCTTCACGGCCAACATC
GCTCTCTCGAACCTTTCCCTTGCCATGGTGTCGGTGCCCTTTTACCAGACGATGCGCATGCTGTGTCCCATCTTC
ACCATTCTCATCTACCGCGTCTGGTACAGTCGCACCTACAGCGGCATGACGTACCTTTCTCTGGTTCCCCTCATC
ATCGGCGCCGCCATGACGACGGCGGGCGAGATGACGTTTAGTGATGCTGGCTTCCTCCTCACCATACTCGGTGTC
ATCCTCGCCGCAGTCAAGGTATGTCGAGGCGCATGTGGGCGCAAGTCTTGTGTGTGTGTTTTCTAACGCCTCGCC
ATTTTAGACGGTTGTCACCAATCGATTCATGACGGGATCGCTGTCCCTGCCTCCTATCGAATTCCTTATGCGCAT
GTCGCCTCTCGCCGCCCTGCAAGCACTGGCATGCGCTACCGTGACGGGCGAGGTGGCTGGTTTCCGTGACCTCAT
CACCTCGGGCAATATCGCCCTCGGCCCCGCTTTGGCGTCGCTGGGTGGCAACGGCTTCCTTGCCTTTCTCCTCAA
TATTGCGTCCTTTCAAACGAACAAGCTGGCCGGCGCCTTGACGATGACGGTGTGCGGCAACTTGAAGCAGTGTCT
GACGGTCTTGATTGGCATCTTCATGTTCAGGATCACTGTGGACATGCTCAACGGGGCGGGCATGGCCGTGACCAT
GATTGGCGCCGCCATCTATAGCAAGGCTGAGTTGGACAACAGGAGGAAAAACCGGCAACCGGCATATCAGGCCCT
GGAGCAGAAGCCCAGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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