Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3515
Gene name
Locationscaffold_279:12953..13990
Strand-
Gene length (bp)1037
Transcript length (bp)981
Coding sequence length (bp)978
Protein length (aa) 326

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01328 Peroxidase_2 Peroxidase, family 2 9.3E-39 73 276

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P04963|PRXC_LEPFU Chloroperoxidase OS=Leptoxyphium fumago GN=CPO PE=1 SV=3 65 277 3.0E-12
sp|Q00668|STCC_EMENI Putative sterigmatocystin biosynthesis peroxidase stcC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcC PE=3 SV=2 75 273 7.0E-10
sp|B9W4V8|APO1_COPRA Aromatic peroxygenase (Fragments) OS=Coprinellus radians GN=APO PE=1 SV=2 73 188 6.0E-08
sp|B9W4V6|APO1_AGRAE Aromatic peroxygenase OS=Agrocybe aegerita GN=APO1 PE=1 SV=1 69 288 1.0E-07

GO

GO Term Description Terminal node
GO:0004601 peroxidase activity Yes
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor No
GO:0003674 molecular_function No
GO:0016209 antioxidant activity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.177 0.0591 0.867 0.1154 0.0808 0.0342 0.2811 0.2523 0.1211 0.0088

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.999765

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 0.00 0.0 0.00
CcL In ants, during behavior modification 0.11 0.0 0.42
CcD In ants, recently dead 0.16 0.0 0.62

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 1.0 no
SC16a CcD 1.0 no
CcL CcD 1.0 no

Orthologs

Orthofinder run ID4
Orthogroup10
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|01575
Ophiocordyceps camponoti-floridani Ophcf2|04934
Ophiocordyceps camponoti-floridani Ophcf2|04444
Ophiocordyceps camponoti-floridani Ophcf2|03872
Ophiocordyceps camponoti-floridani Ophcf2|01486
Ophiocordyceps camponoti-floridani Ophcf2|01298
Ophiocordyceps camponoti-rufipedis Ophun1|3812
Ophiocordyceps camponoti-rufipedis Ophun1|2843
Ophiocordyceps camponoti-rufipedis Ophun1|2652
Ophiocordyceps camponoti-rufipedis Ophun1|1703
Ophiocordyceps camponoti-rufipedis Ophun1|4097
Ophiocordyceps camponoti-rufipedis Ophun1|5039
Ophiocordyceps kimflemingae Ophio5|3515 (this protein)
Ophiocordyceps kimflemingae Ophio5|6027
Ophiocordyceps kimflemingae Ophio5|5537
Ophiocordyceps kimflemingae Ophio5|1636
Ophiocordyceps kimflemingae Ophio5|1831
Ophiocordyceps kimflemingae Ophio5|3860
Ophiocordyceps subramaniannii Hirsu2|176
Ophiocordyceps subramaniannii Hirsu2|2725
Ophiocordyceps subramaniannii Hirsu2|3527
Ophiocordyceps subramaniannii Hirsu2|4531
Ophiocordyceps subramaniannii Hirsu2|8567
Ophiocordyceps subramaniannii Hirsu2|4975
Ophiocordyceps subramaniannii Hirsu2|5395
Ophiocordyceps subramaniannii Hirsu2|5900
Ophiocordyceps subramaniannii Hirsu2|5920
Ophiocordyceps subramaniannii Hirsu2|7409
Ophiocordyceps subramaniannii Hirsu2|7976
Ophiocordyceps subramaniannii Hirsu2|8011
Ophiocordyceps subramaniannii Hirsu2|1636

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3515
MRSWPLISLAIITWLDVASTFKVTEEARRSPFGFFNSLQPVNRPRPGFFNQPQPESFKCPPNTPGFKRDSQGHDY
RPPGPNDVRSPCPGLNALANHGYLRRDGRKVNLISITFEALKGLGTSPELGLIVGALGYASKLADLKRLLHLSFD
LDELGGHLVTLAIEHDCSFSREDYAVGDNNAFNPKVWNVALAELSKSDKVTAFSMGRAKSARIDDELTRHKTWYD
PRAIAFGAIEVGLILTTLVPFGLNLGVLTGQSPLAWVRSLFEQERLPCDWSPLPLKTNTITVLALGVESLLADRR
LAQHVVQGIVLTPQVGHTLLIGLRVN
Coding >Ophio5|3515
ATGCGAAGCTGGCCACTCATCTCTTTGGCTATCATCACCTGGCTTGATGTGGCATCGACCTTCAAAGTCACTGAA
GAGGCCAGGCGGTCTCCGTTTGGATTTTTCAATTCGTTGCAGCCTGTAAACCGACCTCGGCCTGGGTTCTTCAAT
CAGCCTCAGCCTGAGTCGTTCAAATGCCCACCGAATACCCCGGGCTTTAAACGGGACTCGCAAGGCCATGATTAT
CGTCCGCCCGGTCCCAACGACGTCCGCAGCCCGTGTCCTGGTCTGAATGCACTGGCCAACCATGGCTATCTTCGA
CGCGATGGCAGAAAAGTCAACCTGATCAGCATCACCTTTGAAGCCCTAAAAGGCCTGGGAACCTCGCCAGAATTA
GGTCTTATTGTCGGCGCACTTGGTTACGCGTCTAAGCTGGCTGATCTCAAGCGTCTCCTTCACTTGAGCTTTGAC
CTTGACGAGCTGGGCGGACATCTTGTCACGCTTGCCATCGAGCATGACTGCAGCTTCTCGCGCGAGGATTATGCC
GTGGGCGATAATAACGCCTTTAACCCCAAGGTATGGAATGTTGCTCTGGCCGAGCTGAGCAAGTCGGACAAGGTG
ACGGCCTTCAGCATGGGCAGGGCTAAAAGCGCACGGATCGACGACGAGTTGACGCGGCATAAAACGTGGTACGAC
CCTCGGGCCATCGCTTTCGGCGCCATCGAAGTCGGTTTGATCCTGACCACCTTGGTTCCCTTTGGCCTGAACCTG
GGCGTCCTCACGGGACAGTCTCCCCTGGCTTGGGTCCGGTCCCTGTTCGAGCAGGAACGGCTGCCGTGTGACTGG
AGCCCTCTTCCATTAAAGACCAACACGATTACGGTTCTGGCTCTCGGCGTTGAATCATTGCTGGCAGACCGGCGC
CTTGCCCAGCATGTGGTACAAGGTATCGTGCTTACACCACAGGTAGGTCATACTCTGCTCATTGGGCTTCGAGTG
AAC
Transcript >Ophio5|3515
ATGCGAAGCTGGCCACTCATCTCTTTGGCTATCATCACCTGGCTTGATGTGGCATCGACCTTCAAAGTCACTGAA
GAGGCCAGGCGGTCTCCGTTTGGATTTTTCAATTCGTTGCAGCCTGTAAACCGACCTCGGCCTGGGTTCTTCAAT
CAGCCTCAGCCTGAGTCGTTCAAATGCCCACCGAATACCCCGGGCTTTAAACGGGACTCGCAAGGCCATGATTAT
CGTCCGCCCGGTCCCAACGACGTCCGCAGCCCGTGTCCTGGTCTGAATGCACTGGCCAACCATGGCTATCTTCGA
CGCGATGGCAGAAAAGTCAACCTGATCAGCATCACCTTTGAAGCCCTAAAAGGCCTGGGAACCTCGCCAGAATTA
GGTCTTATTGTCGGCGCACTTGGTTACGCGTCTAAGCTGGCTGATCTCAAGCGTCTCCTTCACTTGAGCTTTGAC
CTTGACGAGCTGGGCGGACATCTTGTCACGCTTGCCATCGAGCATGACTGCAGCTTCTCGCGCGAGGATTATGCC
GTGGGCGATAATAACGCCTTTAACCCCAAGGTATGGAATGTTGCTCTGGCCGAGCTGAGCAAGTCGGACAAGGTG
ACGGCCTTCAGCATGGGCAGGGCTAAAAGCGCACGGATCGACGACGAGTTGACGCGGCATAAAACGTGGTACGAC
CCTCGGGCCATCGCTTTCGGCGCCATCGAAGTCGGTTTGATCCTGACCACCTTGGTTCCCTTTGGCCTGAACCTG
GGCGTCCTCACGGGACAGTCTCCCCTGGCTTGGGTCCGGTCCCTGTTCGAGCAGGAACGGCTGCCGTGTGACTGG
AGCCCTCTTCCATTAAAGACCAACACGATTACGGTTCTGGCTCTCGGCGTTGAATCATTGCTGGCAGACCGGCGC
CTTGCCCAGCATGTGGTACAAGGTATCGTGCTTACACCACAGGTAGGTCATACTCTGCTCATTGGGCTTCGAGTG
AACTAA
Gene >Ophio5|3515
ATGCGAAGCTGGCCACTCATCTCTTTGGCTATCATCACCTGGCTTGATGTGGCATCGACCTTCAAAGTCACTGAA
GAGGCCAGGCGGTCTCCGTTTGGATTTTTCAATTCGTTGCAGCCTGTAAACCGACCTCGGCCTGGGTTCTTCAAT
CAGCCTCAGCCTGAGTCGTTCAAATGCCCACCGAATACCCCGGGCTTTAAACGGGACTCGCAAGGCCATGATTAT
CGTCCGCCCGGTCCCAACGACGGTAAAGGCAACCCGGGGCCTCCGTCTTCCCGATAACTCGCTGACGATAGCCTC
AAGTCCGCAGCCCGTGTCCTGGTCTGAATGCACTGGCCAACCATGGCTATCTTCGACGCGATGGCAGAAAAGTCA
ACCTGATCAGCATCACCTTTGAAGCCCTAAAAGGCCTGGGAACCTCGCCAGAATTAGGTCTTATTGTCGGCGCAC
TTGGTTACGCGTCTAAGCTGGCTGATCTCAAGCGTCTCCTTCACTTGAGCTTTGACCTTGACGAGCTGGGCGGAC
ATCTTGTCACGCTTGCCATCGAGCATGACTGCAGCTTCTCGCGCGAGGATTATGCCGTGGGCGATAATAACGCCT
TTAACCCCAAGGTATGGAATGTTGCTCTGGCCGAGCTGAGCAAGTCGGACAAGGTGACGGCCTTCAGCATGGGCA
GGGCTAAAAGCGCACGGATCGACGACGAGTTGACGCGGCATAAAACGTGGTACGACCCTCGGGCCATCGCTTTCG
GCGCCATCGAAGTCGGTTTGATCCTGACCACCTTGGTTCCCTTTGGCCTGAACCTGGGCGTCCTCACGGGACAGT
CTCCCCTGGCTTGGGTCCGGTCCCTGTTCGAGCAGGAACGGCTGCCGTGTGACTGGAGCCCTCTTCCATTAAAGA
CCAACACGATTACGGTTCTGGCTCTCGGCGTTGAATCATTGCTGGCAGACCGGCGCCTTGCCCAGCATGTGGTAC
AAGGTATCGTGCTTACACCACAGGTAGGTCATACTCTGCTCATTGGGCTTCGAGTGAACTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail