© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|3515 |
| Gene name | |
| Location | scaffold_279:12953..13990 |
| Strand | - |
| Gene length (bp) | 1037 |
| Transcript length (bp) | 981 |
| Coding sequence length (bp) | 978 |
| Protein length (aa) | 326 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01328 | Peroxidase_2 | Peroxidase, family 2 | 9.3E-39 | 73 | 276 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P04963|PRXC_LEPFU | Chloroperoxidase OS=Leptoxyphium fumago GN=CPO PE=1 SV=3 | 65 | 277 | 3.0E-12 |
| sp|Q00668|STCC_EMENI | Putative sterigmatocystin biosynthesis peroxidase stcC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcC PE=3 SV=2 | 75 | 273 | 7.0E-10 |
| sp|B9W4V8|APO1_COPRA | Aromatic peroxygenase (Fragments) OS=Coprinellus radians GN=APO PE=1 SV=2 | 73 | 188 | 6.0E-08 |
| sp|B9W4V6|APO1_AGRAE | Aromatic peroxygenase OS=Agrocybe aegerita GN=APO1 PE=1 SV=1 | 69 | 288 | 1.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004601 | peroxidase activity | Yes |
| GO:0016491 | oxidoreductase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | No |
| GO:0003674 | molecular_function | No |
| GO:0016209 | antioxidant activity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.177 | 0.0591 | 0.867 | 0.1154 | 0.0808 | 0.0342 | 0.2811 | 0.2523 | 0.1211 | 0.0088 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.999765 |
| Orthofinder run ID | 4 |
| Orthogroup | 10 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3515 MRSWPLISLAIITWLDVASTFKVTEEARRSPFGFFNSLQPVNRPRPGFFNQPQPESFKCPPNTPGFKRDSQGHDY RPPGPNDVRSPCPGLNALANHGYLRRDGRKVNLISITFEALKGLGTSPELGLIVGALGYASKLADLKRLLHLSFD LDELGGHLVTLAIEHDCSFSREDYAVGDNNAFNPKVWNVALAELSKSDKVTAFSMGRAKSARIDDELTRHKTWYD PRAIAFGAIEVGLILTTLVPFGLNLGVLTGQSPLAWVRSLFEQERLPCDWSPLPLKTNTITVLALGVESLLADRR LAQHVVQGIVLTPQVGHTLLIGLRVN |
| Coding | >Ophio5|3515 ATGCGAAGCTGGCCACTCATCTCTTTGGCTATCATCACCTGGCTTGATGTGGCATCGACCTTCAAAGTCACTGAA GAGGCCAGGCGGTCTCCGTTTGGATTTTTCAATTCGTTGCAGCCTGTAAACCGACCTCGGCCTGGGTTCTTCAAT CAGCCTCAGCCTGAGTCGTTCAAATGCCCACCGAATACCCCGGGCTTTAAACGGGACTCGCAAGGCCATGATTAT CGTCCGCCCGGTCCCAACGACGTCCGCAGCCCGTGTCCTGGTCTGAATGCACTGGCCAACCATGGCTATCTTCGA CGCGATGGCAGAAAAGTCAACCTGATCAGCATCACCTTTGAAGCCCTAAAAGGCCTGGGAACCTCGCCAGAATTA GGTCTTATTGTCGGCGCACTTGGTTACGCGTCTAAGCTGGCTGATCTCAAGCGTCTCCTTCACTTGAGCTTTGAC CTTGACGAGCTGGGCGGACATCTTGTCACGCTTGCCATCGAGCATGACTGCAGCTTCTCGCGCGAGGATTATGCC GTGGGCGATAATAACGCCTTTAACCCCAAGGTATGGAATGTTGCTCTGGCCGAGCTGAGCAAGTCGGACAAGGTG ACGGCCTTCAGCATGGGCAGGGCTAAAAGCGCACGGATCGACGACGAGTTGACGCGGCATAAAACGTGGTACGAC CCTCGGGCCATCGCTTTCGGCGCCATCGAAGTCGGTTTGATCCTGACCACCTTGGTTCCCTTTGGCCTGAACCTG GGCGTCCTCACGGGACAGTCTCCCCTGGCTTGGGTCCGGTCCCTGTTCGAGCAGGAACGGCTGCCGTGTGACTGG AGCCCTCTTCCATTAAAGACCAACACGATTACGGTTCTGGCTCTCGGCGTTGAATCATTGCTGGCAGACCGGCGC CTTGCCCAGCATGTGGTACAAGGTATCGTGCTTACACCACAGGTAGGTCATACTCTGCTCATTGGGCTTCGAGTG AAC |
| Transcript | >Ophio5|3515 ATGCGAAGCTGGCCACTCATCTCTTTGGCTATCATCACCTGGCTTGATGTGGCATCGACCTTCAAAGTCACTGAA GAGGCCAGGCGGTCTCCGTTTGGATTTTTCAATTCGTTGCAGCCTGTAAACCGACCTCGGCCTGGGTTCTTCAAT CAGCCTCAGCCTGAGTCGTTCAAATGCCCACCGAATACCCCGGGCTTTAAACGGGACTCGCAAGGCCATGATTAT CGTCCGCCCGGTCCCAACGACGTCCGCAGCCCGTGTCCTGGTCTGAATGCACTGGCCAACCATGGCTATCTTCGA CGCGATGGCAGAAAAGTCAACCTGATCAGCATCACCTTTGAAGCCCTAAAAGGCCTGGGAACCTCGCCAGAATTA GGTCTTATTGTCGGCGCACTTGGTTACGCGTCTAAGCTGGCTGATCTCAAGCGTCTCCTTCACTTGAGCTTTGAC CTTGACGAGCTGGGCGGACATCTTGTCACGCTTGCCATCGAGCATGACTGCAGCTTCTCGCGCGAGGATTATGCC GTGGGCGATAATAACGCCTTTAACCCCAAGGTATGGAATGTTGCTCTGGCCGAGCTGAGCAAGTCGGACAAGGTG ACGGCCTTCAGCATGGGCAGGGCTAAAAGCGCACGGATCGACGACGAGTTGACGCGGCATAAAACGTGGTACGAC CCTCGGGCCATCGCTTTCGGCGCCATCGAAGTCGGTTTGATCCTGACCACCTTGGTTCCCTTTGGCCTGAACCTG GGCGTCCTCACGGGACAGTCTCCCCTGGCTTGGGTCCGGTCCCTGTTCGAGCAGGAACGGCTGCCGTGTGACTGG AGCCCTCTTCCATTAAAGACCAACACGATTACGGTTCTGGCTCTCGGCGTTGAATCATTGCTGGCAGACCGGCGC CTTGCCCAGCATGTGGTACAAGGTATCGTGCTTACACCACAGGTAGGTCATACTCTGCTCATTGGGCTTCGAGTG AACTAA |
| Gene | >Ophio5|3515 ATGCGAAGCTGGCCACTCATCTCTTTGGCTATCATCACCTGGCTTGATGTGGCATCGACCTTCAAAGTCACTGAA GAGGCCAGGCGGTCTCCGTTTGGATTTTTCAATTCGTTGCAGCCTGTAAACCGACCTCGGCCTGGGTTCTTCAAT CAGCCTCAGCCTGAGTCGTTCAAATGCCCACCGAATACCCCGGGCTTTAAACGGGACTCGCAAGGCCATGATTAT CGTCCGCCCGGTCCCAACGACGGTAAAGGCAACCCGGGGCCTCCGTCTTCCCGATAACTCGCTGACGATAGCCTC AAGTCCGCAGCCCGTGTCCTGGTCTGAATGCACTGGCCAACCATGGCTATCTTCGACGCGATGGCAGAAAAGTCA ACCTGATCAGCATCACCTTTGAAGCCCTAAAAGGCCTGGGAACCTCGCCAGAATTAGGTCTTATTGTCGGCGCAC TTGGTTACGCGTCTAAGCTGGCTGATCTCAAGCGTCTCCTTCACTTGAGCTTTGACCTTGACGAGCTGGGCGGAC ATCTTGTCACGCTTGCCATCGAGCATGACTGCAGCTTCTCGCGCGAGGATTATGCCGTGGGCGATAATAACGCCT TTAACCCCAAGGTATGGAATGTTGCTCTGGCCGAGCTGAGCAAGTCGGACAAGGTGACGGCCTTCAGCATGGGCA GGGCTAAAAGCGCACGGATCGACGACGAGTTGACGCGGCATAAAACGTGGTACGACCCTCGGGCCATCGCTTTCG GCGCCATCGAAGTCGGTTTGATCCTGACCACCTTGGTTCCCTTTGGCCTGAACCTGGGCGTCCTCACGGGACAGT CTCCCCTGGCTTGGGTCCGGTCCCTGTTCGAGCAGGAACGGCTGCCGTGTGACTGGAGCCCTCTTCCATTAAAGA CCAACACGATTACGGTTCTGGCTCTCGGCGTTGAATCATTGCTGGCAGACCGGCGCCTTGCCCAGCATGTGGTAC AAGGTATCGTGCTTACACCACAGGTAGGTCATACTCTGCTCATTGGGCTTCGAGTGAACTAA |