© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|3514 |
| Gene name | |
| Location | scaffold_279:10461..11415 |
| Strand | - |
| Gene length (bp) | 954 |
| Transcript length (bp) | 786 |
| Coding sequence length (bp) | 783 |
| Protein length (aa) | 261 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01764 | Lipase_3 | Lipase (class 3) | 8.7E-31 | 99 | 232 |
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 5.8E-06 | 125 | 235 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59952|LIP_THELA | Lipase OS=Thermomyces lanuginosus GN=LIP PE=1 SV=1 | 4 | 251 | 6.0E-38 |
| sp|P61869|MDLA_PENCY | Mono- and diacylglycerol lipase OS=Penicillium cyclopium GN=mdlA PE=3 SV=1 | 2 | 250 | 5.0E-25 |
| sp|P61870|MDLA_PENCA | Mono- and diacylglycerol lipase OS=Penicillium camembertii GN=mdlA PE=1 SV=1 | 2 | 250 | 5.0E-25 |
| sp|B8NIB8|FAEA_ASPFN | Probable feruloyl esterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=faeA PE=3 SV=2 | 67 | 247 | 2.0E-19 |
| sp|Q9P979|FAEA_ASPAW | Feruloyl esterase A OS=Aspergillus awamori GN=faeA PE=1 SV=3 | 67 | 247 | 1.0E-18 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59952|LIP_THELA | Lipase OS=Thermomyces lanuginosus GN=LIP PE=1 SV=1 | 4 | 251 | 6.0E-38 |
| sp|P61869|MDLA_PENCY | Mono- and diacylglycerol lipase OS=Penicillium cyclopium GN=mdlA PE=3 SV=1 | 2 | 250 | 5.0E-25 |
| sp|P61870|MDLA_PENCA | Mono- and diacylglycerol lipase OS=Penicillium camembertii GN=mdlA PE=1 SV=1 | 2 | 250 | 5.0E-25 |
| sp|B8NIB8|FAEA_ASPFN | Probable feruloyl esterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=faeA PE=3 SV=2 | 67 | 247 | 2.0E-19 |
| sp|Q9P979|FAEA_ASPAW | Feruloyl esterase A OS=Aspergillus awamori GN=faeA PE=1 SV=3 | 67 | 247 | 1.0E-18 |
| sp|Q2UNW5|FAEA_ASPOR | Probable feruloyl esterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=faeA PE=3 SV=1 | 67 | 247 | 3.0E-18 |
| sp|Q0CBM7|FAEA_ASPTN | Probable feruloyl esterase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=faeA PE=3 SV=1 | 67 | 247 | 3.0E-18 |
| sp|A2QSY5|FAEA_ASPNC | Probable feruloyl esterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=faeA PE=3 SV=1 | 5 | 247 | 6.0E-17 |
| sp|O42807|FAEA_ASPNG | Feruloyl esterase A OS=Aspergillus niger GN=faeA PE=1 SV=1 | 5 | 247 | 2.0E-16 |
| sp|P61872|LIP_RHIOR | Lipase OS=Rhizopus oryzae PE=1 SV=1 | 16 | 251 | 8.0E-16 |
| sp|P61871|LIP_RHINI | Lipase OS=Rhizopus niveus PE=1 SV=1 | 16 | 251 | 8.0E-16 |
| sp|O42815|FAEA_ASPTU | Feruloyl esterase A OS=Aspergillus tubingensis GN=faeA PE=3 SV=1 | 67 | 247 | 2.0E-15 |
| sp|P19515|LIP_RHIMI | Lipase OS=Rhizomucor miehei PE=1 SV=2 | 82 | 250 | 2.0E-14 |
| sp|P47145|YJ77_YEAST | Putative lipase YJR107W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR107W PE=3 SV=2 | 73 | 209 | 5.0E-12 |
| sp|Q948R1|PLA11_ARATH | Phospholipase A(1) DAD1, chloroplastic OS=Arabidopsis thaliana GN=DAD1 PE=1 SV=1 | 95 | 230 | 4.0E-09 |
| sp|Q9XTR8|LIP1_CAEEL | Lipase ZK262.3 OS=Caenorhabditis elegans GN=ZK262.3 PE=1 SV=1 | 69 | 230 | 9.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006629 | lipid metabolic process | Yes |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 25 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 234.06 | 124.59 | 343.53 |
| CcL | In ants, during behavior modification | 1.33 | 0.00 | 2.88 |
| CcD | In ants, recently dead | 3.24 | 0.25 | 6.23 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.000286 | yes |
| SC16a | CcD | 0.000286 | yes |
| CcL | CcD | 0.113436 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3514 MLSLIFTLAVLAAILGGSVQQVSAKPDSGDQFAMFAQYSMAAYCPTLHDGFDRSDICSNSLERSCPNFDNTTTVA EFLNNDFYGVGGYVAANPNRRHIVVAFKGSDTMFDMYTDVSKGLVACQDLCHGCSAHSGFYTALTRIKDRLEQAV RAELKKAGRKGYRVVVTGHSLGGALASLAGVYLRNRGIRCDIYTYGAPLVGNAALASHIASQKGFTGRVTNARDL VTAIPQWSWRFQPYAHSFPEYWYSNGLDGGERQYEV |
| Coding | >Ophio5|3514 ATGCTGTCCCTCATCTTCACCCTCGCCGTTCTAGCCGCCATCCTCGGCGGAAGCGTCCAACAAGTCTCAGCAAAA CCAGACTCGGGCGACCAATTCGCCATGTTCGCCCAGTATTCCATGGCCGCCTACTGCCCGACGTTGCACGATGGC TTCGACCGCAGCGATATCTGCTCCAACTCGCTCGAGCGGTCTTGTCCCAACTTTGATAACACGACGACGGTGGCC GAGTTTCTCAATAACGACTTCTACGGCGTGGGCGGCTATGTTGCTGCGAATCCTAACCGTCGCCATATCGTCGTT GCCTTCAAGGGCTCTGATACCATGTTTGACATGTATACGGACGTCTCCAAGGGTTTGGTAGCCTGCCAAGACCTC TGCCACGGCTGCTCCGCCCACAGCGGCTTCTACACCGCCCTCACCCGTATCAAAGACCGGCTCGAGCAGGCCGTC CGCGCCGAGCTCAAGAAAGCCGGCCGGAAGGGATACCGAGTGGTGGTGACGGGCCACTCCCTCGGAGGCGCGCTC GCTTCCCTCGCAGGCGTCTACCTTCGCAACCGAGGTATCCGGTGCGACATCTACACGTACGGCGCCCCTCTGGTG GGAAACGCCGCTCTGGCCAGCCACATCGCTTCTCAGAAGGGCTTCACCGGCCGCGTGACCAACGCTCGGGATCTG GTGACGGCCATTCCGCAATGGAGCTGGCGCTTTCAGCCCTATGCTCACAGCTTTCCCGAGTACTGGTATTCCAAT GGTCTCGACGGCGGGGAGCGGCAGTACGAGGTG |
| Transcript | >Ophio5|3514 ATGCTGTCCCTCATCTTCACCCTCGCCGTTCTAGCCGCCATCCTCGGCGGAAGCGTCCAACAAGTCTCAGCAAAA CCAGACTCGGGCGACCAATTCGCCATGTTCGCCCAGTATTCCATGGCCGCCTACTGCCCGACGTTGCACGATGGC TTCGACCGCAGCGATATCTGCTCCAACTCGCTCGAGCGGTCTTGTCCCAACTTTGATAACACGACGACGGTGGCC GAGTTTCTCAATAACGACTTCTACGGCGTGGGCGGCTATGTTGCTGCGAATCCTAACCGTCGCCATATCGTCGTT GCCTTCAAGGGCTCTGATACCATGTTTGACATGTATACGGACGTCTCCAAGGGTTTGGTAGCCTGCCAAGACCTC TGCCACGGCTGCTCCGCCCACAGCGGCTTCTACACCGCCCTCACCCGTATCAAAGACCGGCTCGAGCAGGCCGTC CGCGCCGAGCTCAAGAAAGCCGGCCGGAAGGGATACCGAGTGGTGGTGACGGGCCACTCCCTCGGAGGCGCGCTC GCTTCCCTCGCAGGCGTCTACCTTCGCAACCGAGGTATCCGGTGCGACATCTACACGTACGGCGCCCCTCTGGTG GGAAACGCCGCTCTGGCCAGCCACATCGCTTCTCAGAAGGGCTTCACCGGCCGCGTGACCAACGCTCGGGATCTG GTGACGGCCATTCCGCAATGGAGCTGGCGCTTTCAGCCCTATGCTCACAGCTTTCCCGAGTACTGGTATTCCAAT GGTCTCGACGGCGGGGAGCGGCAGTACGAGGTGTAA |
| Gene | >Ophio5|3514 ATGCTGTCCCTCATCTTCACCCTCGCCGTTCTAGCCGCCATCCTCGGCGGAAGCGTCCAACAAGGTGAGGCGAAA ACCCCCATTTTTTTTTTGCCGTCTTCTCCTTTCTCACTAACCGGGCTCAAAAGTCTCAGCAAAACCAGACTCGGG CGACCAATTCGCCATGTTCGCCCAGTATTCCATGGCCGCCTACTGCCCGACGTTGCACGATGGCTTCGACCGCAG CGATATCTGCTCCAACTCGCTCGAGCGGTCTTGTCCCAACTTTGATAACACGACGACGGTGGCCGAGTTTCTCAA TAACGACTTCTACGGCGTGGGCGGCTATGTTGCTGCGAATCCTAACCGTCGCCATATCGTCGTTGCCTTCAAGGG CTCTGATACCATGTTTGACATGTATACGGACGTCTCCAAGGGTTTGGTAGCCTGGTGAGTCGTCTTCCCCCCCTT TTTTTTCATACCCGCTGACTCTCCCCCGACCAGCCAAGACCTCTGCCACGGCTGCTCCGCCCACAGCGGCTTCTA CACCGCCCTCACCCGTATCAAAGACCGGCTCGAGCAGGCCGTCCGCGCCGAGCTCAAGAAAGCCGGCCGGAAGGG ATACCGAGTGGTGGTGACGGGCCACTCCCTCGGAGGCGCGCTCGCTTCCCTCGCAGGCGTCTACCTTCGCAACCG AGGTATCCGGTGCGACATCTACACGTACGGCGCCCCTCTGGTGGGAAACGCCGCTCTGGCCAGCCACATCGCTTC TCAGAAGGGCTTCACCGGCCGCGTGACCAACGCTCGGGATCTGGTGACGGCCATTCCGCAATGGAGCTGGCGCTT TCAGCCCTATGCTCACAGCTTTCCCGAGTACTGGTATTCCAATGGTCTCGACGGCGGGGAGCGGCAGTACGAGGG TGTGAGACCGCGTCGCTGTAGCGATCCTCGTCTATGCTCAAGCTCGCAGTGTAA |