Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3511
Gene name
Locationscaffold_279:2377..3722
Strand-
Gene length (bp)1345
Transcript length (bp)861
Coding sequence length (bp)858
Protein length (aa) 286

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3511
MPPLPGMRIRTRNWLALLTFSASSYGRVEDCLAVRLVPTLALDESMAVTLDYLVQHPVLMLRVPECLTDAAWTRL
TSSGYRPSKMYKDPFTMKFLALLALTSATAMAARSGKPYGNPSPNPSPYGGGGGDSGSNSGGQSYSPDNDDDDDD
NGGYPDKNDDSPYPKPQPSPYPKPQPNPYPKPQPPKPQPKPSACVRPGGKCNVGLGPNSVCCEGTCVPDTPGLPG
SSGKCSGGGGGNNGGNGGGRSPYNGGGGGGGGSYGGGSNGGGSNGGGGGGGGGYPSPAPAY
Coding >Ophio5|3511
ATGCCGCCTCTGCCGGGAATGCGTATCCGTACTCGAAACTGGCTTGCCCTGCTCACTTTCTCTGCTAGCTCGTAT
GGCCGGGTTGAAGACTGTCTCGCAGTCCGCCTAGTCCCGACTCTTGCCCTGGACGAGAGCATGGCTGTAACGCTC
GATTACCTTGTACAGCATCCAGTCCTCATGTTGCGCGTGCCGGAATGTCTGACAGACGCCGCCTGGACAAGGTTG
ACAAGCTCTGGCTATCGACCAAGTAAAATGTATAAAGACCCCTTCACCATGAAGTTCCTCGCCCTTCTTGCTCTC
ACCAGCGCGACCGCCATGGCGGCTCGCAGCGGCAAGCCTTACGGCAATCCTTCTCCCAACCCGAGTCCCTACGGC
GGCGGCGGTGGTGACTCCGGTAGCAACAGTGGTGGACAATCTTATTCTCCGGACAATGACGACGATGATGACGAC
AACGGCGGCTATCCTGACAAGAATGACGATTCTCCCTACCCCAAGCCCCAGCCGAGTCCCTATCCGAAGCCGCAG
CCGAACCCCTACCCCAAGCCGCAGCCACCGAAGCCGCAGCCCAAGCCCTCAGCTTGCGTGCGACCCGGTGGTAAG
TGTAACGTGGGGTTGGGCCCTAACTCGGTCTGCTGCGAAGGCACATGTGTCCCCGACACGCCAGGTCTCCCCGGA
AGCTCGGGCAAGTGCTCCGGCGGCGGTGGCGGTAACAACGGAGGCAACGGCGGTGGCCGAAGCCCCTACAACGGC
GGCGGCGGTGGCGGCGGAGGCTCTTACGGAGGAGGATCCAACGGAGGAGGATCCAACGGAGGTGGCGGCGGCGGC
GGCGGCGGCTATCCTTCGCCTGCGCCCGCCTAC
Transcript >Ophio5|3511
ATGCCGCCTCTGCCGGGAATGCGTATCCGTACTCGAAACTGGCTTGCCCTGCTCACTTTCTCTGCTAGCTCGTAT
GGCCGGGTTGAAGACTGTCTCGCAGTCCGCCTAGTCCCGACTCTTGCCCTGGACGAGAGCATGGCTGTAACGCTC
GATTACCTTGTACAGCATCCAGTCCTCATGTTGCGCGTGCCGGAATGTCTGACAGACGCCGCCTGGACAAGGTTG
ACAAGCTCTGGCTATCGACCAAGTAAAATGTATAAAGACCCCTTCACCATGAAGTTCCTCGCCCTTCTTGCTCTC
ACCAGCGCGACCGCCATGGCGGCTCGCAGCGGCAAGCCTTACGGCAATCCTTCTCCCAACCCGAGTCCCTACGGC
GGCGGCGGTGGTGACTCCGGTAGCAACAGTGGTGGACAATCTTATTCTCCGGACAATGACGACGATGATGACGAC
AACGGCGGCTATCCTGACAAGAATGACGATTCTCCCTACCCCAAGCCCCAGCCGAGTCCCTATCCGAAGCCGCAG
CCGAACCCCTACCCCAAGCCGCAGCCACCGAAGCCGCAGCCCAAGCCCTCAGCTTGCGTGCGACCCGGTGGTAAG
TGTAACGTGGGGTTGGGCCCTAACTCGGTCTGCTGCGAAGGCACATGTGTCCCCGACACGCCAGGTCTCCCCGGA
AGCTCGGGCAAGTGCTCCGGCGGCGGTGGCGGTAACAACGGAGGCAACGGCGGTGGCCGAAGCCCCTACAACGGC
GGCGGCGGTGGCGGCGGAGGCTCTTACGGAGGAGGATCCAACGGAGGAGGATCCAACGGAGGTGGCGGCGGCGGC
GGCGGCGGCTATCCTTCGCCTGCGCCCGCCTACTAA
Gene >Ophio5|3511
ATGCCGCCTCTGCCGGGAATGCGTATCCGTACTCGAAACTGGCTTGCCCTGCTCACTTTCTCTGCTAGCTCGTAT
GGCCGGGTTGAAGACTGTCTCGCAGTCCGCCTAGTCCCGACTCTTGCCCTGGACGAGAGCATGGCTGTAACGCTC
GATTACCTTGTACAGCATCCAGTCGTTAGCCTCTTTTTTCGCTTGGCAACCGCATCATCCTACGACCTCGCCAGC
TCATGTTGCGCGTGCCGGAATGTCTGACAGACGCCGCCTGGACAAGGTTGACAAGCTCTGGCTATCGACCAAGTA
AAATGTATAAAGACCGTGAGTCCAGAGCTCCAATTTGAATTCTGCAGCTCGCCTTCGATTGCCTCTTCAGTCACT
TAGCAGCCCGCTTCGAGTCTTGTTTCCGCCCACAGCCTTCACCATGAAGTTCCTCGCCCTTCTTGCTCTCACCAG
CGCGACCGCCATGGCGGCTCGCAGCGGCAAGCCTTACGGCAATCCTTCTCCCAACCCGAGTCCCTACGGCGGCGG
CGGTGGTGACTCCGGTAGCAACAGTGGTGGACAATCTTATTCTCCGGACAATGACGACGATGATGACGACAACGG
CGGCTATCCTGACAAGAATGACGATTCGTCATACCCGTCTCCGTCTCCGAACCCTTATCCCAAGCCGAGTCCCTA
CTCCAAGCCGAAGCCGAGCCCCTACCCAAAGCCGGAGCCTAAACCCTACCCCAAGCCGGAGCNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCGAGT
CCCTACCCCAAGCCCCAGCCGAGTCCCTATCCGAAGCCGCAGCCGAACCCCTACCCCAAGCCGCAGCCACCGAAG
CCGCAGCCCAAGCCCTCAGCTTGCGTGCGACCCGGTGGTAAGTGTAACGTGGGGTTGGGCCCTAACTCGGTCTGC
TGCGAAGGCACATGTGTCCCCGACACGCCAGGTCTCCCCGGAAGCTCGGGCAAGGTAAGTCGAGAGTCTGATGAC
CGGTTTGACTGGTCATGCCAGTGGCTAACATGCCATTCTCATCTAGTGCTCCGGCGGCGGTGGCGGTAACAACGG
AGGCAACGGCGGTGGCCGAAGCCCCTACAACGGCGGCGGCGGTGGCGGCGGAGGCTCTTACGGAGGAGGATCCAA
CGGAGGAGGATCCAACGGAGGTGGCGGCGGCGGCGGCGGCGGCTATCCTTCGCCTGCGCCCGCCTACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail