Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|35
Gene name
Locationscaffold_1:83685..84462
Strand-
Gene length (bp)777
Transcript length (bp)777
Coding sequence length (bp)774
Protein length (aa) 258

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13772 AIG2_2 AIG2-like family 8.4E-09 62 155

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 172 194 22
2 204 223 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|35
MAAATFLGMRGIRPLSQVNVSVPSLRLTFGLRGVPYWEPCFANVVFRDPPEKTASDDWDGRLMGVVYEVTVSDFG
VIMRTEGAGSSYKEITIPCIPIKSGPQPHETRPFLARTLFAPQEKEERRHEGAQPSGRYLKLLQDGAREHGLPES
YQRYLQSLQPYTTTHWRQRVGRFLLLLIWSPMLLVFLKVTGLLVDETGRLPAGLATAMSTWFNLMWMTYKAIFKP
LFGDGERTEAAADEDDRRVLGSYKMLLRSGQLV
Coding >Ophio5|35
ATGGCGGCTGCAACCTTTCTTGGGATGCGAGGCATTAGGCCCCTTTCTCAAGTCAACGTGTCCGTCCCAAGCCTT
CGTCTCACGTTTGGTCTCCGCGGCGTGCCTTACTGGGAGCCGTGCTTCGCCAACGTCGTTTTCAGAGACCCACCC
GAGAAGACGGCTTCCGACGATTGGGATGGCCGTCTGATGGGCGTCGTGTACGAGGTCACAGTCAGCGATTTCGGC
GTCATCATGCGGACCGAGGGCGCAGGTTCTAGCTACAAGGAGATCACAATTCCCTGCATCCCCATCAAAAGCGGG
CCGCAGCCACATGAGACTCGACCATTTCTGGCAAGGACCCTTTTTGCTCCGCAGGAAAAGGAGGAACGGAGGCAT
GAGGGCGCGCAGCCCAGCGGGCGATATCTCAAACTCCTGCAGGATGGCGCTCGAGAACACGGGCTCCCAGAGAGC
TACCAGAGATACCTGCAGTCACTGCAGCCCTACACCACCACACACTGGCGGCAGCGGGTGGGACGTTTCCTGCTG
CTCCTCATCTGGTCGCCGATGTTGCTGGTCTTCCTCAAGGTGACAGGCCTATTGGTGGACGAGACCGGAAGGCTG
CCGGCGGGGCTGGCAACGGCCATGAGCACGTGGTTCAACCTTATGTGGATGACCTACAAGGCCATATTCAAGCCC
CTCTTTGGCGATGGCGAAAGGACGGAGGCCGCAGCCGACGAGGACGACAGACGAGTGTTGGGGTCGTACAAGATG
TTGCTGAGGTCCGGCCAATTGGTC
Transcript >Ophio5|35
ATGGCGGCTGCAACCTTTCTTGGGATGCGAGGCATTAGGCCCCTTTCTCAAGTCAACGTGTCCGTCCCAAGCCTT
CGTCTCACGTTTGGTCTCCGCGGCGTGCCTTACTGGGAGCCGTGCTTCGCCAACGTCGTTTTCAGAGACCCACCC
GAGAAGACGGCTTCCGACGATTGGGATGGCCGTCTGATGGGCGTCGTGTACGAGGTCACAGTCAGCGATTTCGGC
GTCATCATGCGGACCGAGGGCGCAGGTTCTAGCTACAAGGAGATCACAATTCCCTGCATCCCCATCAAAAGCGGG
CCGCAGCCACATGAGACTCGACCATTTCTGGCAAGGACCCTTTTTGCTCCGCAGGAAAAGGAGGAACGGAGGCAT
GAGGGCGCGCAGCCCAGCGGGCGATATCTCAAACTCCTGCAGGATGGCGCTCGAGAACACGGGCTCCCAGAGAGC
TACCAGAGATACCTGCAGTCACTGCAGCCCTACACCACCACACACTGGCGGCAGCGGGTGGGACGTTTCCTGCTG
CTCCTCATCTGGTCGCCGATGTTGCTGGTCTTCCTCAAGGTGACAGGCCTATTGGTGGACGAGACCGGAAGGCTG
CCGGCGGGGCTGGCAACGGCCATGAGCACGTGGTTCAACCTTATGTGGATGACCTACAAGGCCATATTCAAGCCC
CTCTTTGGCGATGGCGAAAGGACGGAGGCCGCAGCCGACGAGGACGACAGACGAGTGTTGGGGTCGTACAAGATG
TTGCTGAGGTCCGGCCAATTGGTCTGA
Gene >Ophio5|35
ATGGCGGCTGCAACCTTTCTTGGGATGCGAGGCATTAGGCCCCTTTCTCAAGTCAACGTGTCCGTCCCAAGCCTT
CGTCTCACGTTTGGTCTCCGCGGCGTGCCTTACTGGGAGCCGTGCTTCGCCAACGTCGTTTTCAGAGACCCACCC
GAGAAGACGGCTTCCGACGATTGGGATGGCCGTCTGATGGGCGTCGTGTACGAGGTCACAGTCAGCGATTTCGGC
GTCATCATGCGGACCGAGGGCGCAGGTTCTAGCTACAAGGAGATCACAATTCCCTGCATCCCCATCAAAAGCGGG
CCGCAGCCACATGAGACTCGACCATTTCTGGCAAGGACCCTTTTTGCTCCGCAGGAAAAGGAGGAACGGAGGCAT
GAGGGCGCGCAGCCCAGCGGGCGATATCTCAAACTCCTGCAGGATGGCGCTCGAGAACACGGGCTCCCAGAGAGC
TACCAGAGATACCTGCAGTCACTGCAGCCCTACACCACCACACACTGGCGGCAGCGGGTGGGACGTTTCCTGCTG
CTCCTCATCTGGTCGCCGATGTTGCTGGTCTTCCTCAAGGTGACAGGCCTATTGGTGGACGAGACCGGAAGGCTG
CCGGCGGGGCTGGCAACGGCCATGAGCACGTGGTTCAACCTTATGTGGATGACCTACAAGGCCATATTCAAGCCC
CTCTTTGGCGATGGCGAAAGGACGGAGGCCGCAGCCGACGAGGACGACAGACGAGTGTTGGGGTCGTACAAGATG
TTGCTGAGGTCCGGCCAATTGGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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