Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3499
Gene name
Locationscaffold_278:10093..11146
Strand-
Gene length (bp)1053
Transcript length (bp)1053
Coding sequence length (bp)1050
Protein length (aa) 350

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01753 zf-MYND MYND finger 2.1E-05 23 61

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3499
MHVIPRHFYSSIDQLRSLKPRRCEWCGIQYGDLRRCGACQVVYYCQPACQLADSVHHAEPCNTIFNARCAYTREC
RKVPPDLAAIEYSLMAVHRARVGGYGKPGGSAEVVQTALKDLQDMLRRVSFNEVRSLGLCCMLPGLLIRLGRDDE
ALQYIKFNNCLYRRLYDPVDFQNMVPAELDDDGNLVESADDDPSECTHNCGLHDEIDLFHQRAESLLQGGRLLLS
HAPFILLLKMRALLVLKTLQNAQLAFFGILPQEIIDLIKARVLDSVTCNRQDMLVATPETMQQLDGELERDVQVT
CQYIQTCSSKFWDIFTTDTDAKFLSDPSSYELGQPWEEYSRLVVGSIYAA
Coding >Ophio5|3499
ATGCACGTCATCCCACGACATTTTTATTCAAGTATCGACCAGCTCAGGAGTCTCAAACCGCGACGCTGTGAGTGG
TGCGGCATCCAATACGGCGACCTAAGGCGCTGCGGAGCCTGTCAGGTTGTCTACTACTGCCAGCCTGCTTGCCAG
CTTGCCGATTCAGTACATCACGCGGAGCCGTGCAATACCATCTTCAACGCCCGCTGCGCCTACACGAGAGAGTGT
CGAAAGGTGCCCCCTGACCTTGCCGCTATAGAGTACAGCCTCATGGCTGTCCACCGTGCCCGAGTCGGAGGCTAC
GGCAAGCCTGGCGGATCCGCCGAGGTGGTTCAGACGGCGTTGAAGGACCTGCAGGATATGTTACGCAGGGTGAGC
TTCAATGAAGTTCGTTCACTCGGCTTGTGCTGCATGCTGCCTGGTCTATTGATTCGTCTCGGCAGGGACGATGAA
GCCCTACAGTACATCAAGTTCAACAATTGTCTGTACCGCCGTCTTTATGACCCCGTGGACTTTCAGAACATGGTA
CCAGCTGAGTTGGATGACGACGGTAACCTTGTGGAGTCGGCCGACGATGATCCTAGTGAATGCACCCACAACTGT
GGCCTGCACGACGAGATAGACTTATTTCACCAACGGGCCGAATCGTTGCTCCAGGGCGGCCGACTGCTCCTCAGC
CACGCTCCCTTCATTCTCCTGCTCAAGATGCGCGCTCTGCTCGTACTGAAGACGCTGCAAAATGCCCAGCTTGCT
TTCTTCGGCATCCTCCCCCAGGAAATCATTGATCTCATCAAGGCGAGAGTCCTCGACAGTGTCACCTGCAACCGG
CAAGACATGCTGGTGGCCACGCCGGAGACGATGCAGCAGCTAGACGGAGAGCTTGAGAGAGATGTTCAAGTAACG
TGCCAGTACATTCAGACTTGCAGCAGCAAGTTTTGGGATATCTTTACGACAGACACGGACGCCAAATTCCTATCG
GACCCCAGTTCGTACGAACTGGGCCAGCCGTGGGAGGAATACAGCAGGCTCGTCGTCGGCTCCATCTATGCTGCC
Transcript >Ophio5|3499
ATGCACGTCATCCCACGACATTTTTATTCAAGTATCGACCAGCTCAGGAGTCTCAAACCGCGACGCTGTGAGTGG
TGCGGCATCCAATACGGCGACCTAAGGCGCTGCGGAGCCTGTCAGGTTGTCTACTACTGCCAGCCTGCTTGCCAG
CTTGCCGATTCAGTACATCACGCGGAGCCGTGCAATACCATCTTCAACGCCCGCTGCGCCTACACGAGAGAGTGT
CGAAAGGTGCCCCCTGACCTTGCCGCTATAGAGTACAGCCTCATGGCTGTCCACCGTGCCCGAGTCGGAGGCTAC
GGCAAGCCTGGCGGATCCGCCGAGGTGGTTCAGACGGCGTTGAAGGACCTGCAGGATATGTTACGCAGGGTGAGC
TTCAATGAAGTTCGTTCACTCGGCTTGTGCTGCATGCTGCCTGGTCTATTGATTCGTCTCGGCAGGGACGATGAA
GCCCTACAGTACATCAAGTTCAACAATTGTCTGTACCGCCGTCTTTATGACCCCGTGGACTTTCAGAACATGGTA
CCAGCTGAGTTGGATGACGACGGTAACCTTGTGGAGTCGGCCGACGATGATCCTAGTGAATGCACCCACAACTGT
GGCCTGCACGACGAGATAGACTTATTTCACCAACGGGCCGAATCGTTGCTCCAGGGCGGCCGACTGCTCCTCAGC
CACGCTCCCTTCATTCTCCTGCTCAAGATGCGCGCTCTGCTCGTACTGAAGACGCTGCAAAATGCCCAGCTTGCT
TTCTTCGGCATCCTCCCCCAGGAAATCATTGATCTCATCAAGGCGAGAGTCCTCGACAGTGTCACCTGCAACCGG
CAAGACATGCTGGTGGCCACGCCGGAGACGATGCAGCAGCTAGACGGAGAGCTTGAGAGAGATGTTCAAGTAACG
TGCCAGTACATTCAGACTTGCAGCAGCAAGTTTTGGGATATCTTTACGACAGACACGGACGCCAAATTCCTATCG
GACCCCAGTTCGTACGAACTGGGCCAGCCGTGGGAGGAATACAGCAGGCTCGTCGTCGGCTCCATCTATGCTGCC
TAG
Gene >Ophio5|3499
ATGCACGTCATCCCACGACATTTTTATTCAAGTATCGACCAGCTCAGGAGTCTCAAACCGCGACGCTGTGAGTGG
TGCGGCATCCAATACGGCGACCTAAGGCGCTGCGGAGCCTGTCAGGTTGTCTACTACTGCCAGCCTGCTTGCCAG
CTTGCCGATTCAGTACATCACGCGGAGCCGTGCAATACCATCTTCAACGCCCGCTGCGCCTACACGAGAGAGTGT
CGAAAGGTGCCCCCTGACCTTGCCGCTATAGAGTACAGCCTCATGGCTGTCCACCGTGCCCGAGTCGGAGGCTAC
GGCAAGCCTGGCGGATCCGCCGAGGTGGTTCAGACGGCGTTGAAGGACCTGCAGGATATGTTACGCAGGGTGAGC
TTCAATGAAGTTCGTTCACTCGGCTTGTGCTGCATGCTGCCTGGTCTATTGATTCGTCTCGGCAGGGACGATGAA
GCCCTACAGTACATCAAGTTCAACAATTGTCTGTACCGCCGTCTTTATGACCCCGTGGACTTTCAGAACATGGTA
CCAGCTGAGTTGGATGACGACGGTAACCTTGTGGAGTCGGCCGACGATGATCCTAGTGAATGCACCCACAACTGT
GGCCTGCACGACGAGATAGACTTATTTCACCAACGGGCCGAATCGTTGCTCCAGGGCGGCCGACTGCTCCTCAGC
CACGCTCCCTTCATTCTCCTGCTCAAGATGCGCGCTCTGCTCGTACTGAAGACGCTGCAAAATGCCCAGCTTGCT
TTCTTCGGCATCCTCCCCCAGGAAATCATTGATCTCATCAAGGCGAGAGTCCTCGACAGTGTCACCTGCAACCGG
CAAGACATGCTGGTGGCCACGCCGGAGACGATGCAGCAGCTAGACGGAGAGCTTGAGAGAGATGTTCAAGTAACG
TGCCAGTACATTCAGACTTGCAGCAGCAAGTTTTGGGATATCTTTACGACAGACACGGACGCCAAATTCCTATCG
GACCCCAGTTCGTACGAACTGGGCCAGCCGTGGGAGGAATACAGCAGGCTCGTCGTCGGCTCCATCTATGCTGCC
TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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