Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|3456
Gene name
Location	scaffold_274:3816..5216
Strand	+
Gene length (bp)	1400
Transcript length (bp)	1233
Coding sequence length (bp)	1230
Protein length (aa)	410

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12697	Abhydrolase_6	Alpha/beta hydrolase family	7.6E-15	56	357

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q12405\|LPX1_YEAST	Peroxisomal membrane protein LPX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LPX1 PE=1 SV=1	53	311	2.0E-12

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 16	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|3456 MSSSLFRQLKHTINAAHTREYVGATAGGDDDTPRLSVKQYVPLDNLDPQPGDVTIIGAHANGFCKELYEPLWDDV YQLLARRSIRIRSIWIADMWNQGQSGVLNEKILGNDPSWFDHARDLMNLMNQKFDDISHPIVGIGHSMGATQLAL LSLSHPRLLDALVLIDPVIQLGNTGIAPAVLSAKRRDLWPSRDAAADKLKESEFYKDWDARVLQRWTEYCLRSLP TELHPAEGDDDERVTLTTSKHQELFTFLRPIHRNKSTVDLDPDQAEKMPGYPFYRPEPAYVLKHLSELRPSTLYI FGGRSDLSTPELREEKMATTGTGVGGNGGDSASRVKQVVLDCGHLVAMEKVEECAEAITEFLDYELARQRREKAT QKQQWEQTPRLKQITVDEQWVKEVKPRRNGRDTKL
Coding	>Ophio5\|3456 ATGTCGTCGTCGCTGTTCCGCCAACTGAAGCATACCATCAACGCGGCGCACACGCGCGAGTATGTGGGCGCAACC GCAGGCGGTGACGACGACACGCCACGGTTGAGTGTCAAGCAATACGTGCCGCTGGACAACCTTGATCCGCAGCCG GGGGACGTTACCATCATTGGCGCACATGCCAATGGCTTTTGCAAGGAGCTGTACGAACCACTTTGGGACGATGTC TACCAGCTGCTAGCCCGTCGTTCCATTCGTATCCGCTCTATCTGGATCGCCGACATGTGGAATCAGGGCCAGTCT GGCGTTCTCAATGAGAAGATACTGGGCAACGACCCGAGCTGGTTCGACCACGCGAGAGACCTCATGAATCTCATG AACCAGAAGTTCGACGACATCAGCCATCCTATAGTAGGCATCGGCCATAGTATGGGCGCCACCCAGCTAGCGCTT CTGTCCCTCTCCCATCCACGGCTGCTCGACGCCCTGGTTCTGATTGACCCCGTCATTCAGCTGGGCAACACAGGC ATCGCCCCAGCTGTCCTGTCAGCCAAACGTCGCGACCTCTGGCCGTCGAGGGACGCGGCTGCCGACAAGCTCAAG GAGAGCGAATTCTACAAAGATTGGGATGCGCGAGTGCTCCAGCGCTGGACAGAGTACTGTCTGCGGTCGCTACCT ACGGAGCTTCATCCCGCGGAGGGCGACGACGACGAGCGCGTCACACTCACCACGTCCAAGCACCAGGAGCTCTTC ACCTTTCTCAGACCCATTCACCGCAACAAGTCGACAGTCGACCTGGATCCAGACCAGGCCGAAAAGATGCCTGGC TACCCCTTCTACCGGCCGGAGCCGGCGTACGTCCTCAAGCATCTCTCCGAACTCCGGCCTAGCACGCTTTACATC TTTGGCGGTCGCTCAGATCTGTCGACGCCGGAGCTGCGCGAGGAAAAGATGGCGACGACGGGGACGGGCGTGGGC GGCAACGGCGGCGACTCGGCCAGTCGCGTCAAGCAAGTCGTTCTCGACTGTGGTCATCTTGTGGCCATGGAAAAG GTGGAAGAGTGCGCCGAAGCCATCACCGAGTTCCTCGACTATGAGCTGGCGAGGCAGCGGCGCGAGAAGGCGACG CAAAAGCAACAATGGGAGCAGACACCGAGGCTGAAGCAAATCACGGTGGATGAGCAATGGGTCAAGGAGGTCAAG CCGCGCCGCAATGGCCGCGACACGAAGCTG
Transcript	>Ophio5\|3456 ATGTCGTCGTCGCTGTTCCGCCAACTGAAGCATACCATCAACGCGGCGCACACGCGCGAGTATGTGGGCGCAACC GCAGGCGGTGACGACGACACGCCACGGTTGAGTGTCAAGCAATACGTGCCGCTGGACAACCTTGATCCGCAGCCG GGGGACGTTACCATCATTGGCGCACATGCCAATGGCTTTTGCAAGGAGCTGTACGAACCACTTTGGGACGATGTC TACCAGCTGCTAGCCCGTCGTTCCATTCGTATCCGCTCTATCTGGATCGCCGACATGTGGAATCAGGGCCAGTCT GGCGTTCTCAATGAGAAGATACTGGGCAACGACCCGAGCTGGTTCGACCACGCGAGAGACCTCATGAATCTCATG AACCAGAAGTTCGACGACATCAGCCATCCTATAGTAGGCATCGGCCATAGTATGGGCGCCACCCAGCTAGCGCTT CTGTCCCTCTCCCATCCACGGCTGCTCGACGCCCTGGTTCTGATTGACCCCGTCATTCAGCTGGGCAACACAGGC ATCGCCCCAGCTGTCCTGTCAGCCAAACGTCGCGACCTCTGGCCGTCGAGGGACGCGGCTGCCGACAAGCTCAAG GAGAGCGAATTCTACAAAGATTGGGATGCGCGAGTGCTCCAGCGCTGGACAGAGTACTGTCTGCGGTCGCTACCT ACGGAGCTTCATCCCGCGGAGGGCGACGACGACGAGCGCGTCACACTCACCACGTCCAAGCACCAGGAGCTCTTC ACCTTTCTCAGACCCATTCACCGCAACAAGTCGACAGTCGACCTGGATCCAGACCAGGCCGAAAAGATGCCTGGC TACCCCTTCTACCGGCCGGAGCCGGCGTACGTCCTCAAGCATCTCTCCGAACTCCGGCCTAGCACGCTTTACATC TTTGGCGGTCGCTCAGATCTGTCGACGCCGGAGCTGCGCGAGGAAAAGATGGCGACGACGGGGACGGGCGTGGGC GGCAACGGCGGCGACTCGGCCAGTCGCGTCAAGCAAGTCGTTCTCGACTGTGGTCATCTTGTGGCCATGGAAAAG GTGGAAGAGTGCGCCGAAGCCATCACCGAGTTCCTCGACTATGAGCTGGCGAGGCAGCGGCGCGAGAAGGCGACG CAAAAGCAACAATGGGAGCAGACACCGAGGCTGAAGCAAATCACGGTGGATGAGCAATGGGTCAAGGAGGTCAAG CCGCGCCGCAATGGCCGCGACACGAAGCTGTGA
Gene	>Ophio5\|3456 ATGTCGTCGTCGCTGTTCCGCCAACTGAAGCATACCATCAACGCGGCGCACACGCGCGAGTATGTGGGCGCAACC GCAGGCGGTGACGACGACACGCCACGGTTGAGTGTCAAGCAATACGTGCCGCTGGACAACCTTGATCCGCAGCCG GGGGACGTTACCATCATTGGCGCACATGCCAATGGCTTTTGCAAGGTGACGCTCCTTGATGATTACCTTTTCCCA GCAGAGAGCATCGCTGACGTCGCTGTTACGCCTAGGAGCTGTACGAACCACTTTGGGACGATGTCTACCAGCTGC TAGCCCGTCGTTCCATTCGTATCCGCTCTATCTGGATCGCCGACATGTGGAATCAGGGCCAGTCTGGCGTTCTCA ATGAGAAGATACTGGGCAACGACCGTAATACGTCTGATCTTGTTCACGGTGACATTCGCTGACCTCGCCCGGCAG CGAGCTGGTTCGACCACGCGAGAGACCTCATGAATCTCATGAACCAGAAGTTCGACGACATCAGCCATCCTATAG TAGGCATCGGCCATAGTATGGGCGCCACCCAGCTGTAAGCTCGTCGCCTCCGAATCCTGTGCATGTACTGATAGA GACTCTCGAGAGCGCTTCTGTCCCTCTCCCATCCACGGCTGCTCGACGCCCTGGTTCTGATTGACCCCGTCATTC AGCTGGGCAACACAGGCATCGCCCCAGCTGTCCTGTCAGCCAAACGTCGCGACCTCTGGCCGTCGAGGGACGCGG CTGCCGACAAGCTCAAGGAGAGCGAATTCTACAAAGATTGGGATGCGCGAGTGCTCCAGCGCTGGACAGAGTACT GTCTGCGGTCGCTACCTACGGAGCTTCATCCCGCGGAGGGCGACGACGACGAGCGCGTCACACTCACCACGTCCA AGCACCAGGAGCTCTTCACCTTTCTCAGACCCATTCACCGCAACAAGTCGACAGTCGACCTGGATCCAGACCAGG CCGAAAAGATGCCTGGCTACCCCTTCTACCGGCCGGAGCCGGCGTACGTCCTCAAGCATCTCTCCGAACTCCGGC CTAGCACGCTTTACATCTTTGGCGGTCGCTCAGATCTGTCGACGCCGGAGCTGCGCGAGGAAAAGATGGCGACGA CGGGGACGGGCGTGGGCGGCAACGGCGGCGACTCGGCCAGTCGCGTCAAGCAAGTCGTTCTCGACTGTGGTCATC TTGTGGCCATGGAAAAGGTGGAAGAGTGCGCCGAAGCCATCACCGAGTTCCTCGACTATGAGCTGGCGAGGCAGC GGCGCGAGAAGGCGACGCAAAAGCAACAATGGGAGCAGACACCGAGGCTGAAGCAAATCACGGTGGATGAGCAAT GGGTCAAGGAGGTCAAGCCGCGCCGCAATGGCCGCGACACGAAGCTGTGA

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