Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3449
Gene name
Locationscaffold_273:15142..16270
Strand-
Gene length (bp)1128
Transcript length (bp)1044
Coding sequence length (bp)1041
Protein length (aa) 347

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01398 JAB JAB1/Mov34/MPN/PAD-1 ubiquitin protease 1.5E-29 49 156
PF18323 CSN5_C Cop9 signalosome subunit 5 C-terminal domain 2.4E-20 255 342

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4IJM4|CSN5_GIBZE COP9 signalosome complex subunit 5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRI1 PE=3 SV=1 1 347 0.0E+00
sp|Q4WZP2|CSN5_ASPFU COP9 signalosome complex subunit 5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn5 PE=3 SV=2 1 345 4.0E-147
sp|Q5BBF1|CSN5_EMENI COP9 signalosome complex subunit 5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rri1 PE=1 SV=2 1 347 3.0E-144
sp|Q7RXX8|CSN5_NEUCR COP9 signalosome complex subunit 5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=csn-5 PE=1 SV=1 10 341 3.0E-139
sp|Q54PF3|CSN5_DICDI COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum GN=csn5 PE=1 SV=1 3 342 3.0E-116
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Swissprot ID Swissprot Description Start End E-value
sp|Q4IJM4|CSN5_GIBZE COP9 signalosome complex subunit 5 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRI1 PE=3 SV=1 1 347 0.0E+00
sp|Q4WZP2|CSN5_ASPFU COP9 signalosome complex subunit 5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn5 PE=3 SV=2 1 345 4.0E-147
sp|Q5BBF1|CSN5_EMENI COP9 signalosome complex subunit 5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rri1 PE=1 SV=2 1 347 3.0E-144
sp|Q7RXX8|CSN5_NEUCR COP9 signalosome complex subunit 5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=csn-5 PE=1 SV=1 10 341 3.0E-139
sp|Q54PF3|CSN5_DICDI COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum GN=csn5 PE=1 SV=1 3 342 3.0E-116
sp|Q6C703|CSN5_YARLI COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RRI1 PE=3 SV=1 4 341 3.0E-116
sp|Q9XZ58|CSN5_DROME COP9 signalosome complex subunit 5 OS=Drosophila melanogaster GN=CSN5 PE=1 SV=1 7 345 4.0E-114
sp|Q4P804|CSN5_USTMA COP9 signalosome complex subunit 5 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=RRI1 PE=3 SV=1 9 314 7.0E-113
sp|Q8LAZ7|CSN5B_ARATH COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana GN=CSN5B PE=1 SV=2 7 343 1.0E-111
sp|Q9FVU9|CSN5A_ARATH COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana GN=CSN5A PE=1 SV=1 7 344 2.0E-110
sp|Q6PC30|CSN5_DANRE COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2 SV=1 6 344 3.0E-110
sp|Q6P635|CSN5_XENTR COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5 PE=2 SV=1 7 344 2.0E-109
sp|Q92905|CSN5_HUMAN COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1 SV=4 7 344 3.0E-109
sp|O35864|CSN5_MOUSE COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1 SV=3 7 344 4.0E-109
sp|Q6GLM9|CSN5_XENLA COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2 SV=1 7 344 4.0E-109
sp|P91001|CSN5_CAEEL COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans GN=csn-5 PE=1 SV=1 7 277 1.0E-106
sp|P0CQ24|CSN5_CRYNJ COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=RRI1 PE=3 SV=1 1 342 2.0E-97
sp|P0CQ25|CSN5_CRYNB COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=RRI1 PE=3 SV=1 1 342 2.0E-97
sp|Q6BMQ3|CSN5_DEBHA COP9 signalosome complex subunit 5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RRI1 PE=3 SV=2 18 257 8.0E-78
sp|O94454|CSN5_SCHPO COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=csn5 PE=1 SV=1 23 273 3.0E-76
sp|Q75E19|CSN5_ASHGO COP9 signalosome complex subunit 5 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRI1 PE=3 SV=1 42 234 2.0E-60
sp|Q59PG6|CSN5_CANAL COP9 signalosome complex subunit 5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RRI1 PE=3 SV=1 36 183 4.0E-53
sp|Q6CRJ8|CSN5_KLULA COP9 signalosome complex subunit 5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RRI1 PE=3 SV=1 41 187 2.0E-51
sp|Q6FT36|CSN5_CANGA COP9 signalosome complex subunit 5 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RRI1 PE=3 SV=1 46 185 7.0E-43
sp|B3LH96|CSN5_YEAS1 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RRI1 PE=3 SV=2 49 251 1.0E-40
sp|Q12468|CSN5_YEAST COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRI1 PE=1 SV=2 49 251 1.0E-40
sp|A6ZXB7|CSN5_YEAS7 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain YJM789) GN=RRI1 PE=3 SV=2 49 251 1.0E-40
sp|Q86IJ1|PSDE_DICDI 26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium discoideum GN=psmD14 PE=3 SV=1 46 254 7.0E-38
sp|P41883|YPT5_CAEEL Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans GN=F37A4.5 PE=3 SV=1 46 257 1.0E-36
sp|O35593|PSDE_MOUSE 26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2 52 291 9.0E-35
sp|O00487|PSDE_HUMAN 26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1 52 291 9.0E-35
sp|Q9V3H2|PSDE_DROME 26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rpn11 PE=1 SV=1 52 291 7.0E-34
sp|O76577|PSDE_CAEEL 26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans GN=rpn-11 PE=1 SV=1 52 255 1.0E-33
sp|Q750E9|RPN11_ASHGO 26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPN11 PE=3 SV=1 52 288 2.0E-33
sp|P43588|RPN11_YEAST Ubiquitin carboxyl-terminal hydrolase RPN11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPN11 PE=1 SV=1 35 250 6.0E-33
sp|Q6FKS1|RPN11_CANGA 26S proteasome regulatory subunit RPN11 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPN11 PE=3 SV=1 52 283 7.0E-33
sp|Q9LT08|PSDE_ARATH 26S proteasome non-ATPase regulatory subunit 14 homolog OS=Arabidopsis thaliana GN=RPN11 PE=1 SV=1 52 281 1.0E-32
sp|P41878|RPN11_SCHPO 26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpn11 PE=1 SV=2 52 254 1.0E-31
sp|Q8SQY3|RPN11_ENCCU 26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi (strain GB-M1) GN=RPN11 PE=1 SV=1 51 270 1.0E-31
sp|B5X8M4|BRCC3_SALSA Lys-63-specific deubiquitinase BRCC36 OS=Salmo salar GN=brcc3 PE=2 SV=1 52 187 6.0E-08
sp|Q66GV6|BRCC3_XENLA Lys-63-specific deubiquitinase BRCC36 OS=Xenopus laevis GN=brcc3 PE=2 SV=1 52 187 2.0E-07
sp|Q5R9L6|BRCC3_PONAB Lys-63-specific deubiquitinase BRCC36 OS=Pongo abelii GN=BRCC3 PE=2 SV=1 65 187 4.0E-07
sp|Q4VA72|BRCC3_XENTR Lys-63-specific deubiquitinase BRCC36 OS=Xenopus tropicalis GN=brcc3 PE=2 SV=1 52 187 4.0E-07
sp|B0KWU8|BRCC3_CALJA Lys-63-specific deubiquitinase BRCC36 OS=Callithrix jacchus GN=BRCC3 PE=3 SV=2 65 187 7.0E-07
sp|P46736|BRCC3_HUMAN Lys-63-specific deubiquitinase BRCC36 OS=Homo sapiens GN=BRCC3 PE=1 SV=2 65 187 8.0E-07
sp|P46737|BRCC3_MOUSE Lys-63-specific deubiquitinase BRCC36 OS=Mus musculus GN=Brcc3 PE=1 SV=1 65 187 1.0E-06
sp|A5PJP6|BRCC3_BOVIN Lys-63-specific deubiquitinase BRCC36 OS=Bos taurus GN=BRCC3 PE=2 SV=1 58 192 2.0E-06
sp|B2RYM5|BRCC3_RAT Lys-63-specific deubiquitinase BRCC36 OS=Rattus norvegicus GN=Brcc3 PE=2 SV=1 65 187 3.0E-06
sp|Q6NKP9|AMSH2_ARATH AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana GN=AMSH2 PE=2 SV=1 49 175 5.0E-06
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GO

GO Term Description Terminal node
GO:0140492 metal-dependent deubiquitinase activity Yes
GO:0005515 protein binding Yes
GO:0070122 obsolete isopeptidase activity Yes
GO:0016787 hydrolase activity No
GO:0005488 binding No
GO:0101005 deubiquitinase activity No
GO:0140096 catalytic activity, acting on a protein No
GO:0003824 catalytic activity No
GO:0019783 ubiquitin-like protein peptidase activity No
GO:0008233 peptidase activity No
GO:0003674 molecular_function No
GO:0008237 metallopeptidase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3449
MEAAMLRAWELENGIGLVDPRRDALYDYDAAAQKAATTARPWAKDPNYFRNVRISAVALIKMTMHARSGGDVEVM
GLMQGYTEDDTFIVTDAFRLPVEGTETRVNAQEDSNEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVE
TEALQQFQDPFVAVVIDPDRTISGGKVDIGAFRTYPASYEPPPDASSRQDGVQAVGVQAVPMAKAAEFGAHANRY
YSLEVSHFKSTLDARLLELLWHKYWVQTLSQSPLLTNRDYSSKLMLDLSSKMKEAASALTRTRPTQNPLLGAMGL
GAGANGKGGDKAIEKLAEETNSIAANERSGLAAGEIKAKLFNNLGAR
Coding >Ophio5|3449
ATGGAGGCCGCGATGCTCAGGGCTTGGGAGCTGGAAAACGGTATCGGCCTTGTCGACCCAAGGCGAGATGCCCTC
TACGACTACGATGCCGCCGCGCAAAAAGCCGCGACGACCGCCCGCCCATGGGCCAAAGATCCAAATTACTTTCGC
AACGTACGAATCAGCGCCGTCGCCCTCATCAAGATGACCATGCACGCCCGCTCCGGCGGAGACGTCGAAGTCATG
GGATTGATGCAGGGCTACACCGAAGATGACACCTTCATCGTCACCGATGCCTTCCGCCTCCCCGTCGAGGGCACC
GAGACGCGCGTCAACGCCCAAGAGGATAGCAACGAGTACATCGTCGAGTATCTCGACCTGTGCCGTGCTCAGGGA
CGCCAGGAGAACGTCGTGGGCTGGTACCATAGCCATCCGGGCTACGGCTGCTGGCTCAGTGGTATTGATGTCGAG
ACCGAGGCCCTACAACAATTTCAGGACCCCTTCGTCGCCGTCGTCATCGACCCCGATCGCACCATCAGTGGGGGA
AAGGTCGACATCGGCGCCTTTCGCACCTATCCAGCCTCATACGAGCCCCCCCCTGACGCATCGTCTCGCCAGGAT
GGCGTCCAAGCCGTAGGCGTTCAGGCCGTACCCATGGCCAAGGCCGCCGAATTCGGTGCCCACGCCAACCGCTAC
TACAGCCTCGAAGTCTCGCATTTCAAGAGCACCCTCGACGCCCGCCTCCTCGAACTGCTGTGGCACAAGTACTGG
GTCCAGACGTTGAGCCAGAGCCCGCTGCTCACCAACCGCGACTACAGCAGCAAGCTGATGTTGGACCTGAGTTCC
AAGATGAAGGAGGCGGCGAGCGCCCTGACGCGCACCCGCCCGACGCAGAACCCGCTGCTCGGCGCAATGGGCCTT
GGTGCCGGCGCCAACGGCAAGGGAGGCGACAAGGCCATCGAGAAGCTCGCCGAGGAGACCAACTCGATTGCGGCC
AACGAAAGGTCCGGACTGGCTGCTGGGGAGATAAAGGCCAAGCTCTTTAACAACTTGGGCGCACGG
Transcript >Ophio5|3449
ATGGAGGCCGCGATGCTCAGGGCTTGGGAGCTGGAAAACGGTATCGGCCTTGTCGACCCAAGGCGAGATGCCCTC
TACGACTACGATGCCGCCGCGCAAAAAGCCGCGACGACCGCCCGCCCATGGGCCAAAGATCCAAATTACTTTCGC
AACGTACGAATCAGCGCCGTCGCCCTCATCAAGATGACCATGCACGCCCGCTCCGGCGGAGACGTCGAAGTCATG
GGATTGATGCAGGGCTACACCGAAGATGACACCTTCATCGTCACCGATGCCTTCCGCCTCCCCGTCGAGGGCACC
GAGACGCGCGTCAACGCCCAAGAGGATAGCAACGAGTACATCGTCGAGTATCTCGACCTGTGCCGTGCTCAGGGA
CGCCAGGAGAACGTCGTGGGCTGGTACCATAGCCATCCGGGCTACGGCTGCTGGCTCAGTGGTATTGATGTCGAG
ACCGAGGCCCTACAACAATTTCAGGACCCCTTCGTCGCCGTCGTCATCGACCCCGATCGCACCATCAGTGGGGGA
AAGGTCGACATCGGCGCCTTTCGCACCTATCCAGCCTCATACGAGCCCCCCCCTGACGCATCGTCTCGCCAGGAT
GGCGTCCAAGCCGTAGGCGTTCAGGCCGTACCCATGGCCAAGGCCGCCGAATTCGGTGCCCACGCCAACCGCTAC
TACAGCCTCGAAGTCTCGCATTTCAAGAGCACCCTCGACGCCCGCCTCCTCGAACTGCTGTGGCACAAGTACTGG
GTCCAGACGTTGAGCCAGAGCCCGCTGCTCACCAACCGCGACTACAGCAGCAAGCTGATGTTGGACCTGAGTTCC
AAGATGAAGGAGGCGGCGAGCGCCCTGACGCGCACCCGCCCGACGCAGAACCCGCTGCTCGGCGCAATGGGCCTT
GGTGCCGGCGCCAACGGCAAGGGAGGCGACAAGGCCATCGAGAAGCTCGCCGAGGAGACCAACTCGATTGCGGCC
AACGAAAGGTCCGGACTGGCTGCTGGGGAGATAAAGGCCAAGCTCTTTAACAACTTGGGCGCACGGTAG
Gene >Ophio5|3449
ATGGAGGCCGCGATGCTCAGGGCTTGGGGTACGCCTCCTCGCCGCCCTCACCTTGTTCCCTCTTCCCCCACCTTC
TCCTCCCCGAGCAGCTAACCTAAAGCTTCGGCTCCAGAGCTGGAAAACGGTATCGGCCTTGTCGACCCAAGGCGA
GATGCCCTCTACGACTACGATGCCGCCGCGCAAAAAGCCGCGACGACCGCCCGCCCATGGGCCAAAGATCCAAAT
TACTTTCGCAACGTACGAATCAGCGCCGTCGCCCTCATCAAGATGACCATGCACGCCCGCTCCGGCGGAGACGTC
GAAGTCATGGGATTGATGCAGGGCTACACCGAAGATGACACCTTCATCGTCACCGATGCCTTCCGCCTCCCCGTC
GAGGGCACCGAGACGCGCGTCAACGCCCAAGAGGATAGCAACGAGTACATCGTCGAGTATCTCGACCTGTGCCGT
GCTCAGGGACGCCAGGAGAACGTCGTGGGCTGGTACCATAGCCATCCGGGCTACGGCTGCTGGCTCAGTGGTATT
GATGTCGAGACCGAGGCCCTACAACAATTTCAGGACCCCTTCGTCGCCGTCGTCATCGACCCCGATCGCACCATC
AGTGGGGGAAAGGTCGACATCGGCGCCTTTCGCACCTATCCAGCCTCATACGAGCCCCCCCCTGACGCATCGTCT
CGCCAGGATGGCGTCCAAGCCGTAGGCGTTCAGGCCGTACCCATGGCCAAGGCCGCCGAATTCGGTGCCCACGCC
AACCGCTACTACAGCCTCGAAGTCTCGCATTTCAAGAGCACCCTCGACGCCCGCCTCCTCGAACTGCTGTGGCAC
AAGTACTGGGTCCAGACGTTGAGCCAGAGCCCGCTGCTCACCAACCGCGACTACAGCAGCAAGCTGATGTTGGAC
CTGAGTTCCAAGATGAAGGAGGCGGCGAGCGCCCTGACGCGCACCCGCCCGACGCAGAACCCGCTGCTCGGCGCA
ATGGGCCTTGGTGCCGGCGCCAACGGCAAGGGAGGCGACAAGGCCATCGAGAAGCTCGCCGAGGAGACCAACTCG
ATTGCGGCCAACGAAAGGTCCGGACTGGCTGCTGGGGAGATAAAGGCCAAGCTCTTTAACAACTTGGGCGCACGG
TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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