Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|3436
Gene name
Location	scaffold_272:11687..13165
Strand	-
Gene length (bp)	1478
Transcript length (bp)	1413
Coding sequence length (bp)	1410
Protein length (aa)	470

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04884	UVB_sens_prot	Vitamin B6 photo-protection and homoeostasis	1.5E-85	73	309

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q86K80\|RUS1_DICDI	RUS1 family protein homolog OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3 SV=1	75	326	1.0E-51
sp\|Q84JB8\|RUS3_ARATH	Protein root UVB sensitive 3 OS=Arabidopsis thaliana GN=RUS3 PE=2 SV=1	76	339	3.0E-46
sp\|Q499P8\|RUS1_RAT	RUS1 family protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1	70	330	2.0E-43
sp\|Q91W34\|RUS1_MOUSE	RUS1 family protein C16orf58 homolog OS=Mus musculus PE=1 SV=1	84	330	3.0E-42
sp\|Q5R8F6\|RUS1_PONAB	RUS1 family protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1	84	330	4.0E-39

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q86K80\|RUS1_DICDI	RUS1 family protein homolog OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3 SV=1	75	326	1.0E-51
sp\|Q84JB8\|RUS3_ARATH	Protein root UVB sensitive 3 OS=Arabidopsis thaliana GN=RUS3 PE=2 SV=1	76	339	3.0E-46
sp\|Q499P8\|RUS1_RAT	RUS1 family protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1	70	330	2.0E-43
sp\|Q91W34\|RUS1_MOUSE	RUS1 family protein C16orf58 homolog OS=Mus musculus PE=1 SV=1	84	330	3.0E-42
sp\|Q5R8F6\|RUS1_PONAB	RUS1 family protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1	84	330	4.0E-39
sp\|Q96GQ5\|RUS1_HUMAN	RUS1 family protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2	84	330	1.0E-38
sp\|Q7X6P3\|RUS1_ARATH	Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana GN=RUS1 PE=1 SV=1	77	322	9.0E-21
sp\|Q9SJX7\|RUS2_ARATH	Protein root UVB sensitive 2, chloroplastic OS=Arabidopsis thaliana GN=RUS2 PE=1 SV=2	36	336	1.0E-19
sp\|B6IDH3\|RUS5_ARATH	Protein root UVB sensitive 5 OS=Arabidopsis thaliana GN=RUS5 PE=2 SV=1	79	332	2.0E-16
sp\|Q93YU2\|RUS6_ARATH	Protein root UVB sensitive 6 OS=Arabidopsis thaliana GN=RUS6 PE=2 SV=1	85	325	2.0E-14
sp\|Q67YT8\|RUS4_ARATH	Protein root UVB sensitive 4 OS=Arabidopsis thaliana GN=RUS4 PE=2 SV=1	76	324	9.0E-11

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|3436 MPRQRRFDGDSFKLAISDDNHRQGFAHLVRSGYDIDVVELSKSGHDPKHWKHSASGLVVRIQLRSQGMVMRSLRG WRKMMMDAFLPVDFPNSVSSDYLAYQMYDSLQAFFSTITSLLASRALLQGLGVGDANSSATFAMLLTIMRNAVSN VVTIIFAHRFGLSIEPEAKKYRFLADLFNDSAFFLELYSPHLGSWTKAIALCSAEGLRAVCGVAAGASKAALSLH FAKNDNLSELSAKEASQETAVSLVGLLVGTVVVRAVQDHSLVVYLVVALSLAHLWTNYRGVRSVCMTSINKQRAT ILFYAYMSSSMVLTPQQVAESERIIFWDGLMRNASHEPVLLISYAKNFGDAMSKGAKDVVAVDGPMHTSFIRPYA PGRPGNIKILLWDGAEPKHAILAWFMAMDTARATTTDNPYGNNDEVSVAAKWRPRARDDLLWTNLEAQGWDLDTG AMETGPGVRLSVEMSGRKDE
Coding	>Ophio5\|3436 ATGCCTCGCCAACGTCGATTCGATGGCGATAGCTTCAAGCTCGCCATTTCAGACGATAACCACCGTCAAGGCTTC GCCCATCTCGTCCGCTCCGGTTACGACATCGACGTCGTCGAGCTCTCCAAATCAGGCCACGACCCCAAGCACTGG AAGCACTCGGCCTCGGGTCTCGTCGTCCGCATCCAACTCCGGAGCCAAGGCATGGTGATGCGCTCGCTGCGTGGC TGGCGCAAGATGATGATGGATGCTTTCCTGCCCGTCGACTTCCCCAACTCGGTTTCGAGCGACTATCTCGCCTAT CAGATGTACGACTCGCTGCAGGCTTTCTTCTCCACCATCACGTCGCTGCTTGCCAGTCGTGCTTTGCTCCAGGGC TTGGGCGTCGGAGATGCGAACTCGTCGGCTACGTTTGCCATGCTTCTCACCATCATGCGCAATGCCGTGTCCAAC GTCGTCACCATCATCTTTGCTCATCGATTCGGCTTGAGCATCGAGCCCGAGGCGAAAAAGTATCGCTTCCTCGCT GACCTCTTCAACGACTCGGCTTTCTTCCTTGAGCTCTATAGCCCCCATCTCGGATCCTGGACCAAGGCCATCGCT CTTTGCTCCGCTGAGGGACTGCGTGCCGTCTGTGGCGTCGCCGCCGGTGCCAGCAAGGCCGCTCTAAGCCTGCAC TTTGCCAAGAACGATAACCTGTCGGAGCTGAGCGCCAAGGAGGCCAGCCAGGAGACGGCCGTCAGCCTCGTCGGC CTGCTCGTCGGTACCGTCGTCGTCCGCGCCGTGCAGGACCACAGCCTCGTCGTCTACCTGGTCGTGGCGCTCTCC CTCGCCCATCTATGGACCAACTACCGCGGCGTGCGTAGCGTCTGCATGACGTCCATCAACAAGCAGCGTGCCACG ATCCTCTTTTACGCCTACATGTCGTCGTCTATGGTCCTCACTCCGCAGCAGGTGGCCGAGAGCGAACGCATCATC TTCTGGGACGGTCTGATGCGCAACGCCAGCCATGAACCCGTCTTGCTCATCAGTTATGCCAAGAACTTTGGTGAC GCCATGAGCAAAGGCGCCAAAGACGTCGTCGCCGTAGACGGCCCCATGCACACAAGCTTCATTCGTCCCTACGCG CCGGGCCGACCCGGAAACATCAAGATTCTTCTCTGGGACGGCGCCGAGCCGAAGCACGCCATCCTCGCCTGGTTC ATGGCCATGGATACGGCTCGGGCGACCACGACGGACAACCCGTATGGGAACAACGACGAAGTGAGTGTCGCAGCG AAATGGCGGCCTCGCGCCCGGGATGACTTGCTGTGGACGAACTTGGAGGCCCAGGGATGGGATTTGGACACGGGC GCCATGGAGACGGGGCCGGGCGTCCGGCTCAGCGTTGAAATGTCCGGCCGCAAGGACGAA
Transcript	>Ophio5\|3436 ATGCCTCGCCAACGTCGATTCGATGGCGATAGCTTCAAGCTCGCCATTTCAGACGATAACCACCGTCAAGGCTTC GCCCATCTCGTCCGCTCCGGTTACGACATCGACGTCGTCGAGCTCTCCAAATCAGGCCACGACCCCAAGCACTGG AAGCACTCGGCCTCGGGTCTCGTCGTCCGCATCCAACTCCGGAGCCAAGGCATGGTGATGCGCTCGCTGCGTGGC TGGCGCAAGATGATGATGGATGCTTTCCTGCCCGTCGACTTCCCCAACTCGGTTTCGAGCGACTATCTCGCCTAT CAGATGTACGACTCGCTGCAGGCTTTCTTCTCCACCATCACGTCGCTGCTTGCCAGTCGTGCTTTGCTCCAGGGC TTGGGCGTCGGAGATGCGAACTCGTCGGCTACGTTTGCCATGCTTCTCACCATCATGCGCAATGCCGTGTCCAAC GTCGTCACCATCATCTTTGCTCATCGATTCGGCTTGAGCATCGAGCCCGAGGCGAAAAAGTATCGCTTCCTCGCT GACCTCTTCAACGACTCGGCTTTCTTCCTTGAGCTCTATAGCCCCCATCTCGGATCCTGGACCAAGGCCATCGCT CTTTGCTCCGCTGAGGGACTGCGTGCCGTCTGTGGCGTCGCCGCCGGTGCCAGCAAGGCCGCTCTAAGCCTGCAC TTTGCCAAGAACGATAACCTGTCGGAGCTGAGCGCCAAGGAGGCCAGCCAGGAGACGGCCGTCAGCCTCGTCGGC CTGCTCGTCGGTACCGTCGTCGTCCGCGCCGTGCAGGACCACAGCCTCGTCGTCTACCTGGTCGTGGCGCTCTCC CTCGCCCATCTATGGACCAACTACCGCGGCGTGCGTAGCGTCTGCATGACGTCCATCAACAAGCAGCGTGCCACG ATCCTCTTTTACGCCTACATGTCGTCGTCTATGGTCCTCACTCCGCAGCAGGTGGCCGAGAGCGAACGCATCATC TTCTGGGACGGTCTGATGCGCAACGCCAGCCATGAACCCGTCTTGCTCATCAGTTATGCCAAGAACTTTGGTGAC GCCATGAGCAAAGGCGCCAAAGACGTCGTCGCCGTAGACGGCCCCATGCACACAAGCTTCATTCGTCCCTACGCG CCGGGCCGACCCGGAAACATCAAGATTCTTCTCTGGGACGGCGCCGAGCCGAAGCACGCCATCCTCGCCTGGTTC ATGGCCATGGATACGGCTCGGGCGACCACGACGGACAACCCGTATGGGAACAACGACGAAGTGAGTGTCGCAGCG AAATGGCGGCCTCGCGCCCGGGATGACTTGCTGTGGACGAACTTGGAGGCCCAGGGATGGGATTTGGACACGGGC GCCATGGAGACGGGGCCGGGCGTCCGGCTCAGCGTTGAAATGTCCGGCCGCAAGGACGAATAG
Gene	>Ophio5\|3436 ATGCCTCGCCAACGTCGATTCGATGGCGATAGCTTCAAGCTCGCCATTTCAGACGATAACCACCGTCAAGGCTTC GCCCATCTCGTCCGCTCCGGTTACGACATCGACGTCGTCGAGCTCTCCAAATCAGGCCACGACCCCAAGCACTGG AAGCACTCGGCCTCGGGTCTCGTCGTCCGCGTCAGTTTGATCGTCTCGCTCGGTCTTTGTAGCCACCGAGCACTC CGCTCACGTGCTTGACGCAGATCCAACTCCGGAGCCAAGGCATGGTGATGCGCTCGCTGCGTGGCTGGCGCAAGA TGATGATGGATGCTTTCCTGCCCGTCGACTTCCCCAACTCGGTTTCGAGCGACTATCTCGCCTATCAGATGTACG ACTCGCTGCAGGCTTTCTTCTCCACCATCACGTCGCTGCTTGCCAGTCGTGCTTTGCTCCAGGGCTTGGGCGTCG GAGATGCGAACTCGTCGGCTACGTTTGCCATGCTTCTCACCATCATGCGCAATGCCGTGTCCAACGTCGTCACCA TCATCTTTGCTCATCGATTCGGCTTGAGCATCGAGCCCGAGGCGAAAAAGTATCGCTTCCTCGCTGACCTCTTCA ACGACTCGGCTTTCTTCCTTGAGCTCTATAGCCCCCATCTCGGATCCTGGACCAAGGCCATCGCTCTTTGCTCCG CTGAGGGACTGCGTGCCGTCTGTGGCGTCGCCGCCGGTGCCAGCAAGGCCGCTCTAAGCCTGCACTTTGCCAAGA ACGATAACCTGTCGGAGCTGAGCGCCAAGGAGGCCAGCCAGGAGACGGCCGTCAGCCTCGTCGGCCTGCTCGTCG GTACCGTCGTCGTCCGCGCCGTGCAGGACCACAGCCTCGTCGTCTACCTGGTCGTGGCGCTCTCCCTCGCCCATC TATGGACCAACTACCGCGGCGTGCGTAGCGTCTGCATGACGTCCATCAACAAGCAGCGTGCCACGATCCTCTTTT ACGCCTACATGTCGTCGTCTATGGTCCTCACTCCGCAGCAGGTGGCCGAGAGCGAACGCATCATCTTCTGGGACG GTCTGATGCGCAACGCCAGCCATGAACCCGTCTTGCTCATCAGTTATGCCAAGAACTTTGGTGACGCCATGAGCA AAGGCGCCAAAGACGTCGTCGCCGTAGACGGCCCCATGCACACAAGCTTCATTCGTCCCTACGCGCCGGGCCGAC CCGGAAACATCAAGATTCTTCTCTGGGACGGCGCCGAGCCGAAGCACGCCATCCTCGCCTGGTTCATGGCCATGG ATACGGCTCGGGCGACCACGACGGACAACCCGTATGGGAACAACGACGAAGTGAGTGTCGCAGCGAAATGGCGGC CTCGCGCCCGGGATGACTTGCTGTGGACGAACTTGGAGGCCCAGGGATGGGATTTGGACACGGGCGCCATGGAGA CGGGGCCGGGCGTCCGGCTCAGCGTTGAAATGTCCGGCCGCAAGGACGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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