Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3434
Gene name
Locationscaffold_272:8560..10106
Strand-
Gene length (bp)1546
Transcript length (bp)1461
Coding sequence length (bp)1458
Protein length (aa) 486

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02487 CLN3 CLN3 protein 6.8E-149 77 467

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4HX89|BTN1_GIBZE Protein BTN1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=BTN1 PE=3 SV=2 56 481 0.0E+00
sp|Q7SC45|BTN1_NEUCR Protein btn-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cln3 PE=3 SV=2 62 481 6.0E-178
sp|Q2GN49|BTN1_CHAGB Protein BTN1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=BTN1 PE=3 SV=1 62 481 1.0E-158
sp|Q4X0S3|BTN1_ASPFU Protein btn1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=btn1 PE=3 SV=1 63 480 4.0E-151
sp|Q6BZW3|BTN1_YARLI Protein BTN1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=BTN1 PE=3 SV=1 70 479 5.0E-116
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Swissprot ID Swissprot Description Start End E-value
sp|Q4HX89|BTN1_GIBZE Protein BTN1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=BTN1 PE=3 SV=2 56 481 0.0E+00
sp|Q7SC45|BTN1_NEUCR Protein btn-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cln3 PE=3 SV=2 62 481 6.0E-178
sp|Q2GN49|BTN1_CHAGB Protein BTN1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=BTN1 PE=3 SV=1 62 481 1.0E-158
sp|Q4X0S3|BTN1_ASPFU Protein btn1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=btn1 PE=3 SV=1 63 480 4.0E-151
sp|Q6BZW3|BTN1_YARLI Protein BTN1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=BTN1 PE=3 SV=1 70 479 5.0E-116
sp|Q6CLN9|BTN1_KLULA Protein BTN1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=BTN1 PE=3 SV=1 72 479 6.0E-106
sp|Q758C3|BTN1_ASHGO Protein BTN1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BTN1 PE=3 SV=1 79 479 1.0E-104
sp|Q59LX9|BTN1_CANAL Protein BTN1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=BTN1 PE=3 SV=1 74 477 1.0E-101
sp|Q6BZ39|BTN1_DEBHA Protein BTN1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=BTN1 PE=3 SV=2 71 477 2.0E-99
sp|Q6FPB6|BTN1_CANGA Protein BTN1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BTN1 PE=3 SV=1 70 479 2.0E-94
sp|P47040|BTN1_YEAST Protein BTN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHC3 PE=3 SV=1 74 479 2.0E-85
sp|Q9US09|BTN1_SCHPO Protein btn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=btn1 PE=1 SV=1 64 479 7.0E-81
sp|Q29611|CLN3_CANLF Battenin OS=Canis lupus familiaris GN=CLN3 PE=3 SV=1 74 467 1.0E-61
sp|Q4P4U7|BTN1_USTMA Protein BTN1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=BTN1 PE=3 SV=2 58 479 5.0E-51
sp|Q13286|CLN3_HUMAN Battenin OS=Homo sapiens GN=CLN3 PE=1 SV=1 77 467 2.0E-49
sp|Q60HH0|CLN3_MACFA Battenin OS=Macaca fascicularis GN=CLN3 PE=2 SV=1 77 467 7.0E-46
sp|Q61124|CLN3_MOUSE Battenin OS=Mus musculus GN=Cln3 PE=1 SV=2 77 466 2.0E-40
sp|P0CM43|BTN1_CRYNB Protein BTN1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=BTN1 PE=3 SV=1 69 478 2.0E-39
sp|P0CM42|BTN1_CRYNJ Protein BTN1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=BTN1 PE=3 SV=1 69 478 2.0E-39
sp|Q54F25|CLN3_DICDI Battenin OS=Dictyostelium discoideum GN=cln3 PE=3 SV=1 74 462 1.0E-28
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GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

Domain # Start End Length
1 76 98 22
2 108 130 22
3 137 154 17
4 164 186 22
5 193 215 22
6 225 244 19
7 308 326 18
8 346 363 17
9 376 398 22
10 402 424 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 53.17 29.08 77.26
CcL In ants, during behavior modification 17.55 7.69 27.42
CcD In ants, recently dead 15.73 6.78 24.68

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.000286 yes
SC16a CcD 0.000286 yes
CcL CcD 0.744273 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3434
MAPPPLDFISSALYHHQHHLLLLLLNHHHHIRLRRLTAMASPGRLTAFSPALLGVSRSSRVARLVALLRKPEARV
LIAFWLLGLINNVLYVIVLSAAQDLVGSLPKGIVLLADVMPSFAVKLVGPYVMHAVPYRVRIPVFIALASTGMLL
VALTPPSRSVAVKMTGVVLASLSSGGGELSFLSLLHYYGENGLVGWGSGTGAAGLVGAGLYELLTAWLGFDVSQA
LLLSACLPVVMFISFFFILPQEPLLRSLGHRQDYEAVPAREAMDEPAVMTEALLAPSSSAVYAPGSNPKSRSLVA
NLKRARSLLVPYMIPLFLVYVAEYTINQGVSPTLLFPPEESPFSQLRGFYPFYGFLYQLGVFISRSSTSLLRVHS
LYLPSFLQLGNLVLLTLHSLFYFLPSVYVVFFIVFWEGLLGGCVYVNCFAEILERVPAEDREFSLGATAVSDSAG
ISAAGILSIAVETRLCEYQVAHGRKWCRMIQTPDTR
Coding >Ophio5|3434
ATGGCTCCCCCCCCCTTGGACTTCATCTCATCCGCTCTCTACCACCACCAACACCACCTCCTCCTCCTCCTCCTC
AACCACCACCACCATATTCGGCTCCGTCGACTCACGGCCATGGCCTCTCCCGGCCGCCTTACCGCTTTCTCTCCT
GCGCTGCTTGGCGTCTCGCGCTCGTCGAGGGTCGCGAGGCTCGTCGCGCTGCTACGCAAGCCCGAAGCCCGCGTC
CTCATCGCCTTCTGGCTTCTCGGTCTTATCAACAATGTCTTGTACGTCATCGTTCTCTCCGCCGCCCAGGACCTC
GTCGGCTCGCTCCCCAAGGGAATCGTCCTGTTGGCCGACGTCATGCCATCCTTTGCTGTCAAGCTCGTTGGCCCG
TACGTGATGCACGCCGTACCATACCGGGTTCGAATTCCCGTATTTATCGCTCTGGCCTCGACTGGCATGCTGCTT
GTTGCTCTTACGCCTCCGTCGCGCTCCGTCGCCGTCAAGATGACCGGCGTAGTCCTCGCTAGCTTGAGCAGCGGT
GGCGGTGAGCTCAGCTTCCTCTCTCTCCTCCACTATTATGGCGAAAACGGCCTTGTCGGTTGGGGCTCCGGGACT
GGCGCTGCCGGTCTTGTTGGCGCAGGCCTGTACGAGCTGTTGACGGCCTGGCTAGGCTTTGACGTCAGCCAGGCT
CTCCTTTTGTCTGCCTGCCTGCCCGTCGTCATGTTCATCAGCTTCTTTTTTATCCTGCCGCAGGAGCCTCTACTT
CGCTCTCTTGGCCATCGCCAAGACTACGAGGCTGTGCCGGCCCGGGAGGCCATGGACGAGCCGGCCGTCATGACG
GAAGCGCTGCTGGCCCCGTCGTCTTCAGCCGTCTACGCGCCCGGCTCGAATCCCAAGTCGAGATCGCTCGTGGCC
AATCTCAAGCGCGCAAGGTCGCTGCTTGTACCGTACATGATTCCTTTGTTTCTAGTCTACGTTGCCGAATACACC
ATCAACCAGGGTGTGTCGCCGACTCTGCTGTTTCCCCCAGAGGAGTCGCCTTTCAGCCAGCTTCGCGGCTTCTAC
CCCTTTTACGGCTTTCTCTACCAGCTTGGCGTCTTCATCTCTCGCTCGTCGACCTCGCTCCTTCGAGTGCACAGC
CTCTACCTGCCCTCATTCCTCCAGCTCGGCAATCTTGTTCTGCTGACGCTGCACTCGCTCTTCTACTTTCTGCCG
TCCGTCTACGTCGTCTTTTTCATCGTCTTCTGGGAAGGCCTCCTTGGCGGCTGCGTCTACGTCAACTGCTTTGCC
GAGATCCTTGAAAGGGTTCCGGCCGAGGACCGCGAGTTCAGCCTAGGGGCGACGGCCGTGAGCGACAGCGCCGGC
ATATCCGCTGCCGGCATCCTAAGCATCGCCGTGGAAACAAGATTGTGCGAATATCAGGTCGCCCATGGACGCAAG
TGGTGCCGCATGATTCAGACACCCGACACTCGA
Transcript >Ophio5|3434
ATGGCTCCCCCCCCCTTGGACTTCATCTCATCCGCTCTCTACCACCACCAACACCACCTCCTCCTCCTCCTCCTC
AACCACCACCACCATATTCGGCTCCGTCGACTCACGGCCATGGCCTCTCCCGGCCGCCTTACCGCTTTCTCTCCT
GCGCTGCTTGGCGTCTCGCGCTCGTCGAGGGTCGCGAGGCTCGTCGCGCTGCTACGCAAGCCCGAAGCCCGCGTC
CTCATCGCCTTCTGGCTTCTCGGTCTTATCAACAATGTCTTGTACGTCATCGTTCTCTCCGCCGCCCAGGACCTC
GTCGGCTCGCTCCCCAAGGGAATCGTCCTGTTGGCCGACGTCATGCCATCCTTTGCTGTCAAGCTCGTTGGCCCG
TACGTGATGCACGCCGTACCATACCGGGTTCGAATTCCCGTATTTATCGCTCTGGCCTCGACTGGCATGCTGCTT
GTTGCTCTTACGCCTCCGTCGCGCTCCGTCGCCGTCAAGATGACCGGCGTAGTCCTCGCTAGCTTGAGCAGCGGT
GGCGGTGAGCTCAGCTTCCTCTCTCTCCTCCACTATTATGGCGAAAACGGCCTTGTCGGTTGGGGCTCCGGGACT
GGCGCTGCCGGTCTTGTTGGCGCAGGCCTGTACGAGCTGTTGACGGCCTGGCTAGGCTTTGACGTCAGCCAGGCT
CTCCTTTTGTCTGCCTGCCTGCCCGTCGTCATGTTCATCAGCTTCTTTTTTATCCTGCCGCAGGAGCCTCTACTT
CGCTCTCTTGGCCATCGCCAAGACTACGAGGCTGTGCCGGCCCGGGAGGCCATGGACGAGCCGGCCGTCATGACG
GAAGCGCTGCTGGCCCCGTCGTCTTCAGCCGTCTACGCGCCCGGCTCGAATCCCAAGTCGAGATCGCTCGTGGCC
AATCTCAAGCGCGCAAGGTCGCTGCTTGTACCGTACATGATTCCTTTGTTTCTAGTCTACGTTGCCGAATACACC
ATCAACCAGGGTGTGTCGCCGACTCTGCTGTTTCCCCCAGAGGAGTCGCCTTTCAGCCAGCTTCGCGGCTTCTAC
CCCTTTTACGGCTTTCTCTACCAGCTTGGCGTCTTCATCTCTCGCTCGTCGACCTCGCTCCTTCGAGTGCACAGC
CTCTACCTGCCCTCATTCCTCCAGCTCGGCAATCTTGTTCTGCTGACGCTGCACTCGCTCTTCTACTTTCTGCCG
TCCGTCTACGTCGTCTTTTTCATCGTCTTCTGGGAAGGCCTCCTTGGCGGCTGCGTCTACGTCAACTGCTTTGCC
GAGATCCTTGAAAGGGTTCCGGCCGAGGACCGCGAGTTCAGCCTAGGGGCGACGGCCGTGAGCGACAGCGCCGGC
ATATCCGCTGCCGGCATCCTAAGCATCGCCGTGGAAACAAGATTGTGCGAATATCAGGTCGCCCATGGACGCAAG
TGGTGCCGCATGATTCAGACACCCGACACTCGATGA
Gene >Ophio5|3434
ATGGCTCCCCCCCCCTTGGACTTCATCTCATCCGCTCTCTACCACCACCAACACCACCTCCTCCTCCTCCTCCTC
AACCACCACCACCATATTCGGCTCCGTCGACTCACGGCCATGGCCTCTCCCGGCCGCCTTACCGCTTTCTCTCCT
GCGCTGCTTGGCGTCTCGCGCTCGTCGAGGGTCGCGAGGCTCGTCGCGCTGCTACGCAAGCCCGAAGCCCGCGTC
CTCATCGCCTTCTGGCTTCTCGGTGAGTAATAATAACCTTCCCCCTCTCCCCGCCTCCGTTGCCCGCCTACGCTA
AACGAGCCCTTTCTGACGATTATTCTCCCCAGGTCTTATCAACAATGTCTTGTACGTCATCGTTCTCTCCGCCGC
CCAGGACCTCGTCGGCTCGCTCCCCAAGGGAATCGTCCTGTTGGCCGACGTCATGCCATCCTTTGCTGTCAAGCT
CGTTGGCCCGTACGTGATGCACGCCGTACCATACCGGGTTCGAATTCCCGTATTTATCGCTCTGGCCTCGACTGG
CATGCTGCTTGTTGCTCTTACGCCTCCGTCGCGCTCCGTCGCCGTCAAGATGACCGGCGTAGTCCTCGCTAGCTT
GAGCAGCGGTGGCGGTGAGCTCAGCTTCCTCTCTCTCCTCCACTATTATGGCGAAAACGGCCTTGTCGGTTGGGG
CTCCGGGACTGGCGCTGCCGGTCTTGTTGGCGCAGGCCTGTACGAGCTGTTGACGGCCTGGCTAGGCTTTGACGT
CAGCCAGGCTCTCCTTTTGTCTGCCTGCCTGCCCGTCGTCATGTTCATCAGCTTCTTTTTTATCCTGCCGCAGGA
GCCTCTACTTCGCTCTCTTGGCCATCGCCAAGACTACGAGGCTGTGCCGGCCCGGGAGGCCATGGACGAGCCGGC
CGTCATGACGGAAGCGCTGCTGGCCCCGTCGTCTTCAGCCGTCTACGCGCCCGGCTCGAATCCCAAGTCGAGATC
GCTCGTGGCCAATCTCAAGCGCGCAAGGTCGCTGCTTGTACCGTACATGATTCCTTTGTTTCTAGTCTACGTTGC
CGAATACACCATCAACCAGGGTGTGTCGCCGACTCTGCTGTTTCCCCCAGAGGAGTCGCCTTTCAGCCAGCTTCG
CGGCTTCTACCCCTTTTACGGCTTTCTCTACCAGCTTGGCGTCTTCATCTCTCGCTCGTCGACCTCGCTCCTTCG
AGTGCACAGCCTCTACCTGCCCTCATTCCTCCAGCTCGGCAATCTTGTTCTGCTGACGCTGCACTCGCTCTTCTA
CTTTCTGCCGTCCGTCTACGTCGTCTTTTTCATCGTCTTCTGGGAAGGCCTCCTTGGCGGCTGCGTCTACGTCAA
CTGCTTTGCCGAGATCCTTGAAAGGGTTCCGGCCGAGGACCGCGAGTTCAGCCTAGGGGCGACGGCCGTGAGCGA
CAGCGCCGGCATATCCGCTGCCGGCATCCTAAGCATCGCCGTGGAAACAAGATTGTGCGAATATCAGGTCGCCCA
TGGACGCAAGTGGTGCCGCATGATTCAGACACCCGACACTCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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