© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|3434 |
| Gene name | |
| Location | scaffold_272:8560..10106 |
| Strand | - |
| Gene length (bp) | 1546 |
| Transcript length (bp) | 1461 |
| Coding sequence length (bp) | 1458 |
| Protein length (aa) | 486 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02487 | CLN3 | CLN3 protein | 6.8E-149 | 77 | 467 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4HX89|BTN1_GIBZE | Protein BTN1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=BTN1 PE=3 SV=2 | 56 | 481 | 0.0E+00 |
| sp|Q7SC45|BTN1_NEUCR | Protein btn-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cln3 PE=3 SV=2 | 62 | 481 | 6.0E-178 |
| sp|Q2GN49|BTN1_CHAGB | Protein BTN1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=BTN1 PE=3 SV=1 | 62 | 481 | 1.0E-158 |
| sp|Q4X0S3|BTN1_ASPFU | Protein btn1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=btn1 PE=3 SV=1 | 63 | 480 | 4.0E-151 |
| sp|Q6BZW3|BTN1_YARLI | Protein BTN1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=BTN1 PE=3 SV=1 | 70 | 479 | 5.0E-116 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4HX89|BTN1_GIBZE | Protein BTN1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=BTN1 PE=3 SV=2 | 56 | 481 | 0.0E+00 |
| sp|Q7SC45|BTN1_NEUCR | Protein btn-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cln3 PE=3 SV=2 | 62 | 481 | 6.0E-178 |
| sp|Q2GN49|BTN1_CHAGB | Protein BTN1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=BTN1 PE=3 SV=1 | 62 | 481 | 1.0E-158 |
| sp|Q4X0S3|BTN1_ASPFU | Protein btn1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=btn1 PE=3 SV=1 | 63 | 480 | 4.0E-151 |
| sp|Q6BZW3|BTN1_YARLI | Protein BTN1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=BTN1 PE=3 SV=1 | 70 | 479 | 5.0E-116 |
| sp|Q6CLN9|BTN1_KLULA | Protein BTN1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=BTN1 PE=3 SV=1 | 72 | 479 | 6.0E-106 |
| sp|Q758C3|BTN1_ASHGO | Protein BTN1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BTN1 PE=3 SV=1 | 79 | 479 | 1.0E-104 |
| sp|Q59LX9|BTN1_CANAL | Protein BTN1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=BTN1 PE=3 SV=1 | 74 | 477 | 1.0E-101 |
| sp|Q6BZ39|BTN1_DEBHA | Protein BTN1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=BTN1 PE=3 SV=2 | 71 | 477 | 2.0E-99 |
| sp|Q6FPB6|BTN1_CANGA | Protein BTN1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BTN1 PE=3 SV=1 | 70 | 479 | 2.0E-94 |
| sp|P47040|BTN1_YEAST | Protein BTN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHC3 PE=3 SV=1 | 74 | 479 | 2.0E-85 |
| sp|Q9US09|BTN1_SCHPO | Protein btn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=btn1 PE=1 SV=1 | 64 | 479 | 7.0E-81 |
| sp|Q29611|CLN3_CANLF | Battenin OS=Canis lupus familiaris GN=CLN3 PE=3 SV=1 | 74 | 467 | 1.0E-61 |
| sp|Q4P4U7|BTN1_USTMA | Protein BTN1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=BTN1 PE=3 SV=2 | 58 | 479 | 5.0E-51 |
| sp|Q13286|CLN3_HUMAN | Battenin OS=Homo sapiens GN=CLN3 PE=1 SV=1 | 77 | 467 | 2.0E-49 |
| sp|Q60HH0|CLN3_MACFA | Battenin OS=Macaca fascicularis GN=CLN3 PE=2 SV=1 | 77 | 467 | 7.0E-46 |
| sp|Q61124|CLN3_MOUSE | Battenin OS=Mus musculus GN=Cln3 PE=1 SV=2 | 77 | 466 | 2.0E-40 |
| sp|P0CM43|BTN1_CRYNB | Protein BTN1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=BTN1 PE=3 SV=1 | 69 | 478 | 2.0E-39 |
| sp|P0CM42|BTN1_CRYNJ | Protein BTN1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=BTN1 PE=3 SV=1 | 69 | 478 | 2.0E-39 |
| sp|Q54F25|CLN3_DICDI | Battenin OS=Dictyostelium discoideum GN=cln3 PE=3 SV=1 | 74 | 462 | 1.0E-28 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 76 | 98 | 22 |
| 2 | 108 | 130 | 22 |
| 3 | 137 | 154 | 17 |
| 4 | 164 | 186 | 22 |
| 5 | 193 | 215 | 22 |
| 6 | 225 | 244 | 19 |
| 7 | 308 | 326 | 18 |
| 8 | 346 | 363 | 17 |
| 9 | 376 | 398 | 22 |
| 10 | 402 | 424 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| SC16a | Pure fungal culture | 53.17 | 29.08 | 77.26 |
| CcL | In ants, during behavior modification | 17.55 | 7.69 | 27.42 |
| CcD | In ants, recently dead | 15.73 | 6.78 | 24.68 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| SC16a | CcL | 0.000286 | yes |
| SC16a | CcD | 0.000286 | yes |
| CcL | CcD | 0.744273 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3434 MAPPPLDFISSALYHHQHHLLLLLLNHHHHIRLRRLTAMASPGRLTAFSPALLGVSRSSRVARLVALLRKPEARV LIAFWLLGLINNVLYVIVLSAAQDLVGSLPKGIVLLADVMPSFAVKLVGPYVMHAVPYRVRIPVFIALASTGMLL VALTPPSRSVAVKMTGVVLASLSSGGGELSFLSLLHYYGENGLVGWGSGTGAAGLVGAGLYELLTAWLGFDVSQA LLLSACLPVVMFISFFFILPQEPLLRSLGHRQDYEAVPAREAMDEPAVMTEALLAPSSSAVYAPGSNPKSRSLVA NLKRARSLLVPYMIPLFLVYVAEYTINQGVSPTLLFPPEESPFSQLRGFYPFYGFLYQLGVFISRSSTSLLRVHS LYLPSFLQLGNLVLLTLHSLFYFLPSVYVVFFIVFWEGLLGGCVYVNCFAEILERVPAEDREFSLGATAVSDSAG ISAAGILSIAVETRLCEYQVAHGRKWCRMIQTPDTR |
| Coding | >Ophio5|3434 ATGGCTCCCCCCCCCTTGGACTTCATCTCATCCGCTCTCTACCACCACCAACACCACCTCCTCCTCCTCCTCCTC AACCACCACCACCATATTCGGCTCCGTCGACTCACGGCCATGGCCTCTCCCGGCCGCCTTACCGCTTTCTCTCCT GCGCTGCTTGGCGTCTCGCGCTCGTCGAGGGTCGCGAGGCTCGTCGCGCTGCTACGCAAGCCCGAAGCCCGCGTC CTCATCGCCTTCTGGCTTCTCGGTCTTATCAACAATGTCTTGTACGTCATCGTTCTCTCCGCCGCCCAGGACCTC GTCGGCTCGCTCCCCAAGGGAATCGTCCTGTTGGCCGACGTCATGCCATCCTTTGCTGTCAAGCTCGTTGGCCCG TACGTGATGCACGCCGTACCATACCGGGTTCGAATTCCCGTATTTATCGCTCTGGCCTCGACTGGCATGCTGCTT GTTGCTCTTACGCCTCCGTCGCGCTCCGTCGCCGTCAAGATGACCGGCGTAGTCCTCGCTAGCTTGAGCAGCGGT GGCGGTGAGCTCAGCTTCCTCTCTCTCCTCCACTATTATGGCGAAAACGGCCTTGTCGGTTGGGGCTCCGGGACT GGCGCTGCCGGTCTTGTTGGCGCAGGCCTGTACGAGCTGTTGACGGCCTGGCTAGGCTTTGACGTCAGCCAGGCT CTCCTTTTGTCTGCCTGCCTGCCCGTCGTCATGTTCATCAGCTTCTTTTTTATCCTGCCGCAGGAGCCTCTACTT CGCTCTCTTGGCCATCGCCAAGACTACGAGGCTGTGCCGGCCCGGGAGGCCATGGACGAGCCGGCCGTCATGACG GAAGCGCTGCTGGCCCCGTCGTCTTCAGCCGTCTACGCGCCCGGCTCGAATCCCAAGTCGAGATCGCTCGTGGCC AATCTCAAGCGCGCAAGGTCGCTGCTTGTACCGTACATGATTCCTTTGTTTCTAGTCTACGTTGCCGAATACACC ATCAACCAGGGTGTGTCGCCGACTCTGCTGTTTCCCCCAGAGGAGTCGCCTTTCAGCCAGCTTCGCGGCTTCTAC CCCTTTTACGGCTTTCTCTACCAGCTTGGCGTCTTCATCTCTCGCTCGTCGACCTCGCTCCTTCGAGTGCACAGC CTCTACCTGCCCTCATTCCTCCAGCTCGGCAATCTTGTTCTGCTGACGCTGCACTCGCTCTTCTACTTTCTGCCG TCCGTCTACGTCGTCTTTTTCATCGTCTTCTGGGAAGGCCTCCTTGGCGGCTGCGTCTACGTCAACTGCTTTGCC GAGATCCTTGAAAGGGTTCCGGCCGAGGACCGCGAGTTCAGCCTAGGGGCGACGGCCGTGAGCGACAGCGCCGGC ATATCCGCTGCCGGCATCCTAAGCATCGCCGTGGAAACAAGATTGTGCGAATATCAGGTCGCCCATGGACGCAAG TGGTGCCGCATGATTCAGACACCCGACACTCGA |
| Transcript | >Ophio5|3434 ATGGCTCCCCCCCCCTTGGACTTCATCTCATCCGCTCTCTACCACCACCAACACCACCTCCTCCTCCTCCTCCTC AACCACCACCACCATATTCGGCTCCGTCGACTCACGGCCATGGCCTCTCCCGGCCGCCTTACCGCTTTCTCTCCT GCGCTGCTTGGCGTCTCGCGCTCGTCGAGGGTCGCGAGGCTCGTCGCGCTGCTACGCAAGCCCGAAGCCCGCGTC CTCATCGCCTTCTGGCTTCTCGGTCTTATCAACAATGTCTTGTACGTCATCGTTCTCTCCGCCGCCCAGGACCTC GTCGGCTCGCTCCCCAAGGGAATCGTCCTGTTGGCCGACGTCATGCCATCCTTTGCTGTCAAGCTCGTTGGCCCG TACGTGATGCACGCCGTACCATACCGGGTTCGAATTCCCGTATTTATCGCTCTGGCCTCGACTGGCATGCTGCTT GTTGCTCTTACGCCTCCGTCGCGCTCCGTCGCCGTCAAGATGACCGGCGTAGTCCTCGCTAGCTTGAGCAGCGGT GGCGGTGAGCTCAGCTTCCTCTCTCTCCTCCACTATTATGGCGAAAACGGCCTTGTCGGTTGGGGCTCCGGGACT GGCGCTGCCGGTCTTGTTGGCGCAGGCCTGTACGAGCTGTTGACGGCCTGGCTAGGCTTTGACGTCAGCCAGGCT CTCCTTTTGTCTGCCTGCCTGCCCGTCGTCATGTTCATCAGCTTCTTTTTTATCCTGCCGCAGGAGCCTCTACTT CGCTCTCTTGGCCATCGCCAAGACTACGAGGCTGTGCCGGCCCGGGAGGCCATGGACGAGCCGGCCGTCATGACG GAAGCGCTGCTGGCCCCGTCGTCTTCAGCCGTCTACGCGCCCGGCTCGAATCCCAAGTCGAGATCGCTCGTGGCC AATCTCAAGCGCGCAAGGTCGCTGCTTGTACCGTACATGATTCCTTTGTTTCTAGTCTACGTTGCCGAATACACC ATCAACCAGGGTGTGTCGCCGACTCTGCTGTTTCCCCCAGAGGAGTCGCCTTTCAGCCAGCTTCGCGGCTTCTAC CCCTTTTACGGCTTTCTCTACCAGCTTGGCGTCTTCATCTCTCGCTCGTCGACCTCGCTCCTTCGAGTGCACAGC CTCTACCTGCCCTCATTCCTCCAGCTCGGCAATCTTGTTCTGCTGACGCTGCACTCGCTCTTCTACTTTCTGCCG TCCGTCTACGTCGTCTTTTTCATCGTCTTCTGGGAAGGCCTCCTTGGCGGCTGCGTCTACGTCAACTGCTTTGCC GAGATCCTTGAAAGGGTTCCGGCCGAGGACCGCGAGTTCAGCCTAGGGGCGACGGCCGTGAGCGACAGCGCCGGC ATATCCGCTGCCGGCATCCTAAGCATCGCCGTGGAAACAAGATTGTGCGAATATCAGGTCGCCCATGGACGCAAG TGGTGCCGCATGATTCAGACACCCGACACTCGATGA |
| Gene | >Ophio5|3434 ATGGCTCCCCCCCCCTTGGACTTCATCTCATCCGCTCTCTACCACCACCAACACCACCTCCTCCTCCTCCTCCTC AACCACCACCACCATATTCGGCTCCGTCGACTCACGGCCATGGCCTCTCCCGGCCGCCTTACCGCTTTCTCTCCT GCGCTGCTTGGCGTCTCGCGCTCGTCGAGGGTCGCGAGGCTCGTCGCGCTGCTACGCAAGCCCGAAGCCCGCGTC CTCATCGCCTTCTGGCTTCTCGGTGAGTAATAATAACCTTCCCCCTCTCCCCGCCTCCGTTGCCCGCCTACGCTA AACGAGCCCTTTCTGACGATTATTCTCCCCAGGTCTTATCAACAATGTCTTGTACGTCATCGTTCTCTCCGCCGC CCAGGACCTCGTCGGCTCGCTCCCCAAGGGAATCGTCCTGTTGGCCGACGTCATGCCATCCTTTGCTGTCAAGCT CGTTGGCCCGTACGTGATGCACGCCGTACCATACCGGGTTCGAATTCCCGTATTTATCGCTCTGGCCTCGACTGG CATGCTGCTTGTTGCTCTTACGCCTCCGTCGCGCTCCGTCGCCGTCAAGATGACCGGCGTAGTCCTCGCTAGCTT GAGCAGCGGTGGCGGTGAGCTCAGCTTCCTCTCTCTCCTCCACTATTATGGCGAAAACGGCCTTGTCGGTTGGGG CTCCGGGACTGGCGCTGCCGGTCTTGTTGGCGCAGGCCTGTACGAGCTGTTGACGGCCTGGCTAGGCTTTGACGT CAGCCAGGCTCTCCTTTTGTCTGCCTGCCTGCCCGTCGTCATGTTCATCAGCTTCTTTTTTATCCTGCCGCAGGA GCCTCTACTTCGCTCTCTTGGCCATCGCCAAGACTACGAGGCTGTGCCGGCCCGGGAGGCCATGGACGAGCCGGC CGTCATGACGGAAGCGCTGCTGGCCCCGTCGTCTTCAGCCGTCTACGCGCCCGGCTCGAATCCCAAGTCGAGATC GCTCGTGGCCAATCTCAAGCGCGCAAGGTCGCTGCTTGTACCGTACATGATTCCTTTGTTTCTAGTCTACGTTGC CGAATACACCATCAACCAGGGTGTGTCGCCGACTCTGCTGTTTCCCCCAGAGGAGTCGCCTTTCAGCCAGCTTCG CGGCTTCTACCCCTTTTACGGCTTTCTCTACCAGCTTGGCGTCTTCATCTCTCGCTCGTCGACCTCGCTCCTTCG AGTGCACAGCCTCTACCTGCCCTCATTCCTCCAGCTCGGCAATCTTGTTCTGCTGACGCTGCACTCGCTCTTCTA CTTTCTGCCGTCCGTCTACGTCGTCTTTTTCATCGTCTTCTGGGAAGGCCTCCTTGGCGGCTGCGTCTACGTCAA CTGCTTTGCCGAGATCCTTGAAAGGGTTCCGGCCGAGGACCGCGAGTTCAGCCTAGGGGCGACGGCCGTGAGCGA CAGCGCCGGCATATCCGCTGCCGGCATCCTAAGCATCGCCGTGGAAACAAGATTGTGCGAATATCAGGTCGCCCA TGGACGCAAGTGGTGCCGCATGATTCAGACACCCGACACTCGATGA |