Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3430
Gene name
Locationscaffold_272:140..2128
Strand+
Gene length (bp)1988
Transcript length (bp)1797
Coding sequence length (bp)1794
Protein length (aa) 598

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.5

Transmembrane Domains

Domain # Start End Length
1 13 32 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3430
MLKPFVRFAPRRPVIVVSVSLLFSFLVLRLVVTTSQQPGGGHGPSSVLRRPWHGIGSSRPFRHGEKIVPSGKTFL
SEAATTTQRPLHVVLPVTHGEVNLCKTLLSLTLTGYPTPNIVAWGGKDDDGSLRGGGSHNAKITSMLDFVNDEER
RMQRPGFEEELVLMVDGYDVWFQLPPDVLLARYEAILSESRARVRHRMGRKAYDEEEGTEQKVVFGAGKRCSPNE
LHTLACYAVPESPLPSDLRGSDTDSMLGRTFMSNGRQRFLVSGYMLGPVAAVRQILVRARDKLLLCLARVGVSFD
NGSGDADFCYHGSDQSIFVEMFAEQEARREFLRRRHRSRLDSLIDLFIHHRPGSKPAPTHIMTEPITDMLSPSFP
HQKFDPTAVEKAELGIVLDYYSLLGFQTSNAEFDTRFLRHADPLPPQAGPIGLFDCPPTRPPPDDLPPQHDVLRR
LADADNVSPRWETLPLYTDLCTGAVPVMIHHNSVDKTWRERSWHQTWWHGRSRALLHERRKDGAPGLVDGFPAEK
GKVLRWEELCPRHVEKELFRDVDDAPPPPPPPPPPPPAPPAPPAPPPPPSPPSPPSSSSSSAPPAEPTKAAPP
Coding >Ophio5|3430
ATGTTGAAGCCTTTTGTGCGGTTTGCGCCGCGGAGGCCGGTTATCGTCGTCTCGGTCTCGTTGCTGTTTAGTTTT
CTTGTTCTGAGACTGGTTGTTACTACGTCGCAGCAGCCTGGTGGTGGTCATGGACCGTCGTCAGTCCTCCGTCGG
CCCTGGCACGGCATCGGGTCGTCCCGACCTTTTCGACATGGTGAAAAAATCGTACCATCAGGAAAAACTTTCCTC
TCGGAAGCGGCGACGACGACACAACGACCTCTTCACGTCGTCCTTCCCGTCACGCACGGCGAAGTCAACCTATGC
AAGACGTTGCTCAGCCTGACTCTGACCGGCTACCCGACTCCCAATATCGTTGCCTGGGGTGGAAAGGATGACGAC
GGTAGTCTGCGAGGCGGGGGTTCGCATAATGCTAAAATCACGTCCATGCTCGATTTTGTCAATGATGAGGAGAGG
AGGATGCAGAGGCCAGGCTTCGAGGAGGAATTGGTTCTCATGGTGGATGGCTATGACGTCTGGTTTCAGCTGCCG
CCGGACGTGCTCCTGGCCCGGTACGAAGCCATCCTATCGGAATCCCGAGCCCGGGTCCGTCATCGAATGGGAAGG
AAAGCCTACGATGAAGAAGAAGGCACGGAGCAAAAAGTCGTCTTCGGCGCCGGCAAAAGATGCTCACCAAACGAA
CTGCACACGCTCGCCTGTTACGCCGTACCGGAATCCCCCCTCCCTTCTGATCTTCGCGGATCGGATACGGATTCG
ATGCTAGGTCGGACTTTTATGAGTAACGGTCGTCAACGCTTTCTCGTTTCCGGTTATATGCTCGGTCCCGTCGCC
GCCGTTAGACAGATTCTCGTCAGGGCTAGGGATAAGTTGCTGCTTTGTTTGGCTCGTGTCGGTGTAAGCTTTGAT
AACGGGTCCGGTGATGCCGATTTTTGCTATCATGGCAGTGATCAGAGTATCTTTGTCGAGATGTTTGCCGAGCAG
GAGGCCCGTCGCGAATTTCTTCGTCGTCGCCATCGTTCCAGGCTCGATTCTCTCATCGATCTCTTCATTCATCAT
CGTCCCGGGTCCAAACCGGCGCCGACGCACATCATGACGGAGCCCATAACCGATATGCTCTCTCCCTCCTTCCCT
CATCAAAAGTTCGACCCTACGGCCGTCGAAAAGGCCGAACTCGGCATCGTGCTCGACTATTATTCCCTGCTCGGC
TTTCAGACCTCCAACGCCGAGTTCGACACCCGCTTTCTCCGCCATGCCGACCCGTTGCCTCCTCAGGCCGGTCCC
ATCGGCCTCTTCGATTGTCCGCCCACCAGGCCTCCTCCCGACGATCTTCCTCCCCAGCATGACGTGCTGCGTCGC
CTGGCCGATGCTGACAACGTCTCGCCCCGCTGGGAGACGTTGCCGCTCTATACCGATCTCTGTACCGGCGCCGTG
CCCGTCATGATCCATCATAACTCCGTCGACAAGACCTGGCGAGAGCGTTCGTGGCATCAGACCTGGTGGCATGGT
CGCTCTAGGGCTCTGCTGCATGAGCGTCGCAAGGATGGCGCCCCGGGCCTCGTCGACGGCTTTCCCGCCGAGAAG
GGCAAAGTCCTACGCTGGGAGGAGCTTTGTCCTCGGCATGTCGAGAAGGAGTTGTTTCGCGATGTCGATGATGCC
CCCCCTCCCCCTCCCCCTCCTCCCCCTCCTCCTCCTGCTCCTCCTGCTCCTCCTGCTCCTCCTCCTCCACCATCA
CCACCATCACCACCATCTTCATCATCATCATCAGCACCACCCGCGGAGCCGACCAAGGCAGCTCCACCA
Transcript >Ophio5|3430
ATGTTGAAGCCTTTTGTGCGGTTTGCGCCGCGGAGGCCGGTTATCGTCGTCTCGGTCTCGTTGCTGTTTAGTTTT
CTTGTTCTGAGACTGGTTGTTACTACGTCGCAGCAGCCTGGTGGTGGTCATGGACCGTCGTCAGTCCTCCGTCGG
CCCTGGCACGGCATCGGGTCGTCCCGACCTTTTCGACATGGTGAAAAAATCGTACCATCAGGAAAAACTTTCCTC
TCGGAAGCGGCGACGACGACACAACGACCTCTTCACGTCGTCCTTCCCGTCACGCACGGCGAAGTCAACCTATGC
AAGACGTTGCTCAGCCTGACTCTGACCGGCTACCCGACTCCCAATATCGTTGCCTGGGGTGGAAAGGATGACGAC
GGTAGTCTGCGAGGCGGGGGTTCGCATAATGCTAAAATCACGTCCATGCTCGATTTTGTCAATGATGAGGAGAGG
AGGATGCAGAGGCCAGGCTTCGAGGAGGAATTGGTTCTCATGGTGGATGGCTATGACGTCTGGTTTCAGCTGCCG
CCGGACGTGCTCCTGGCCCGGTACGAAGCCATCCTATCGGAATCCCGAGCCCGGGTCCGTCATCGAATGGGAAGG
AAAGCCTACGATGAAGAAGAAGGCACGGAGCAAAAAGTCGTCTTCGGCGCCGGCAAAAGATGCTCACCAAACGAA
CTGCACACGCTCGCCTGTTACGCCGTACCGGAATCCCCCCTCCCTTCTGATCTTCGCGGATCGGATACGGATTCG
ATGCTAGGTCGGACTTTTATGAGTAACGGTCGTCAACGCTTTCTCGTTTCCGGTTATATGCTCGGTCCCGTCGCC
GCCGTTAGACAGATTCTCGTCAGGGCTAGGGATAAGTTGCTGCTTTGTTTGGCTCGTGTCGGTGTAAGCTTTGAT
AACGGGTCCGGTGATGCCGATTTTTGCTATCATGGCAGTGATCAGAGTATCTTTGTCGAGATGTTTGCCGAGCAG
GAGGCCCGTCGCGAATTTCTTCGTCGTCGCCATCGTTCCAGGCTCGATTCTCTCATCGATCTCTTCATTCATCAT
CGTCCCGGGTCCAAACCGGCGCCGACGCACATCATGACGGAGCCCATAACCGATATGCTCTCTCCCTCCTTCCCT
CATCAAAAGTTCGACCCTACGGCCGTCGAAAAGGCCGAACTCGGCATCGTGCTCGACTATTATTCCCTGCTCGGC
TTTCAGACCTCCAACGCCGAGTTCGACACCCGCTTTCTCCGCCATGCCGACCCGTTGCCTCCTCAGGCCGGTCCC
ATCGGCCTCTTCGATTGTCCGCCCACCAGGCCTCCTCCCGACGATCTTCCTCCCCAGCATGACGTGCTGCGTCGC
CTGGCCGATGCTGACAACGTCTCGCCCCGCTGGGAGACGTTGCCGCTCTATACCGATCTCTGTACCGGCGCCGTG
CCCGTCATGATCCATCATAACTCCGTCGACAAGACCTGGCGAGAGCGTTCGTGGCATCAGACCTGGTGGCATGGT
CGCTCTAGGGCTCTGCTGCATGAGCGTCGCAAGGATGGCGCCCCGGGCCTCGTCGACGGCTTTCCCGCCGAGAAG
GGCAAAGTCCTACGCTGGGAGGAGCTTTGTCCTCGGCATGTCGAGAAGGAGTTGTTTCGCGATGTCGATGATGCC
CCCCCTCCCCCTCCCCCTCCTCCCCCTCCTCCTCCTGCTCCTCCTGCTCCTCCTGCTCCTCCTCCTCCACCATCA
CCACCATCACCACCATCTTCATCATCATCATCAGCACCACCCGCGGAGCCGACCAAGGCAGCTCCACCATGA
Gene >Ophio5|3430
ATGTTGAAGCCTTTTGTGCGGTTTGCGCCGCGGAGGCCGGTTATCGTCGTCTCGGTCTCGTTGCTGTTTAGTTTT
CTTGTTCTGAGACTGGTTGTTACTACGGTGAGATGAACCCCCCCCCCCCCCCTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGAGAGAGAGAGAGAGAGGAAGAAAAGAAAGAGAGTGTTTTTTTTTATTGATTTGATTCCAATAAAAGTCGCAGC
AGCCTGGTGGTGGTCATGGACCGTCGTCAGTCCTCCGTCGGCCCTGGCACGGCATCGGGTCGTCCCGACCTTTTC
GACATGGTGAAAAAATCGTACCATCAGGAAAAACTTTCCTCTCGGAAGCGGCGACGACGACACAACGACCTCTTC
ACGTCGTCCTTCCCGTCACGCACGGCGAAGTCAACCTATGCAAGACGTTGCTCAGCCTGACTCTGACCGGCTACC
CGACTCCCAATATCGTTGCCTGGGGTGGAAAGGATGACGACGGTAGTCTGCGAGGCGGGGGTTCGCATAATGCTA
AAATCACGTCCATGCTCGATTTTGTCAATGATGAGGAGAGGAGGATGCAGAGGCCAGGCTTCGAGGAGGAATTGG
TTCTCATGGTGGATGGCTATGACGTCTGGTTTCAGCTGCCGCCGGACGTGCTCCTGGCCCGGTACGAAGCCATCC
TATCGGAATCCCGAGCCCGGGTCCGTCATCGAATGGGAAGGAAAGCCTACGATGAAGAAGAAGGCACGGAGCAAA
AAGTCGTCTTCGGCGCCGGCAAAAGATGCTCACCAAACGAACTGCACACGCTCGCCTGTTACGCCGTACCGGAAT
CCCCCCTCCCTTCTGATCTTCGCGGATCGGATACGGATTCGATGCTAGGTCGGACTTTTATGAGTAACGGTCGTC
AACGCTTTCTCGTTTCCGGTTATATGCTCGGTCCCGTCGCCGCCGTTAGACAGATTCTCGTCAGGGCTAGGGATA
AGTTGCTGCTTTGTTTGGCTCGTGTCGGTGTAAGCTTTGATAACGGGTCCGGTGATGCCGATTTTTGCTATCATG
GCAGTGATCAGAGTATCTTTGTCGAGATGTTTGCCGAGCAGGAGGCCCGTCGCGAATTTCTTCGTCGTCGCCATC
GTTCCAGGCTCGATTCTCTCATCGATCTCTTCATTCATCATCGTCCCGGGTCCAAACCGGCGCCGACGCACATCA
TGACGGAGCCCATAACCGATATGCTCTCTCCCTCCTTCCCTCATCAAAAGTTCGACCCTACGGCCGTCGAAAAGG
CCGAACTCGGCATCGTGCTCGACTATTATTCCCTGCTCGGCTTTCAGACCTCCAACGCCGAGTTCGACACCCGCT
TTCTCCGCCATGCCGACCCGTTGCCTCCTCAGGCCGGTCCCATCGGCCTCTTCGATTGTCCGCCCACCAGGCCTC
CTCCCGACGATCTTCCTCCCCAGCATGACGTGCTGCGTCGCCTGGCCGATGCTGACAACGTCTCGCCCCGCTGGG
AGACGTTGCCGCTCTATACCGATCTCTGTACCGGCGCCGTGCCCGTCATGATCCATCATAACTCCGTCGACAAGA
CCTGGCGAGAGCGTTCGTGGCATCAGACCTGGTGGCATGGTCGCTCTAGGGCTCTGCTGCATGAGCGTCGCAAGG
ATGGCGCCCCGGGCCTCGTCGACGGCTTTCCCGCCGAGAAGGGCAAAGTCCTACGCTGGGAGGAGCTTTGTCCTC
GGCATGTCGAGAAGGAGTTGTTTCGCGATGTCGATGATGCCCCCCCTCCCCCTCCCCCTCCTCCCCCTCCTCCTC
CTGCTCCTCCTGCTCCTCCTGCTCCTCCTCCTCCACCATCACCACCATCACCACCATCTTCATCATCATCATCAG
CACCACCCGCGGAGCCGACCAAGGCAGCTCCACCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail