Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3428
Gene name
Locationscaffold_271:24193..25287
Strand+
Gene length (bp)1094
Transcript length (bp)1041
Coding sequence length (bp)1038
Protein length (aa) 346

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00722 Glyco_hydro_16 Glycosyl hydrolases family 16 7.1E-09 86 161

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|A1C7B5|EGLX_ASPCL Probable endo-1,3(4)-beta-glucanase ACLA_073210 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ACLA_073210 PE=3 SV=1 10 345 3.0E-88
sp|A1DHY9|EGLX_NEOFI Probable endo-1,3(4)-beta-glucanase NFIA_089530 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_089530 PE=3 SV=1 12 322 5.0E-87
sp|D4AJR9|EGLX_ARTBC Endo-1,3(4)-beta-glucanase ARB_04519 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04519 PE=3 SV=1 29 322 8.0E-87
sp|Q4X084|EGLX_ASPFU Probable endo-1,3(4)-beta-glucanase AFUA_2G14360 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_2G14360 PE=3 SV=1 29 322 7.0E-86
sp|B0XTU6|EGLX_ASPFC Probable endo-1,3(4)-beta-glucanase AFUB_029980 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_029980 PE=3 SV=1 29 322 7.0E-86
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Swissprot ID Swissprot Description Start End E-value
sp|A1C7B5|EGLX_ASPCL Probable endo-1,3(4)-beta-glucanase ACLA_073210 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ACLA_073210 PE=3 SV=1 10 345 3.0E-88
sp|A1DHY9|EGLX_NEOFI Probable endo-1,3(4)-beta-glucanase NFIA_089530 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_089530 PE=3 SV=1 12 322 5.0E-87
sp|D4AJR9|EGLX_ARTBC Endo-1,3(4)-beta-glucanase ARB_04519 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04519 PE=3 SV=1 29 322 8.0E-87
sp|Q4X084|EGLX_ASPFU Probable endo-1,3(4)-beta-glucanase AFUA_2G14360 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_2G14360 PE=3 SV=1 29 322 7.0E-86
sp|B0XTU6|EGLX_ASPFC Probable endo-1,3(4)-beta-glucanase AFUB_029980 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_029980 PE=3 SV=1 29 322 7.0E-86
sp|Q5BAP5|EGLX_EMENI Endo-1,3(4)-beta-glucanase xgeA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=xgeA PE=3 SV=1 11 323 8.0E-84
sp|Q2UIE6|EGLX_ASPOR Probable endo-1,3(4)-beta-glucanase AO090023000083 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090023000083 PE=3 SV=1 20 322 6.0E-81
sp|A2QBQ3|EGLX_ASPNC Probable endo-1,3(4)-beta-glucanase An02g00850 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An02g00850 PE=3 SV=1 24 322 8.0E-79
sp|B8N7S7|EGLX_ASPFN Probable endo-1,3(4)-beta-glucanase AFLA_105200 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=AFLA_105200 PE=3 SV=1 20 322 9.0E-78
sp|Q9USW3|YHZ7_SCHPO Probable glycosidase C21B10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21B10.07 PE=3 SV=1 9 322 1.0E-77
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GO

GO Term Description Terminal node
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0016787 hydrolase activity No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0003824 catalytic activity No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 167.95 89.50 246.40
CcL In ants, during behavior modification 766.01 33.34 1498.68
CcD In ants, recently dead 791.30 309.85 1272.75

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.000286 yes
SC16a CcD 0.000286 yes
CcL CcD 0.946015 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3428
MRLSITVIGLAGALIASGKTQAQATAPRYSLCTAYDQSNFFQGFDFFTKPDPTRGYVEYVDQVTARQAGLIGNGV
TNGTVMMGVDHHTVNPPNGRRSVRLTSKQSFTRGLFLADIVHMPSSTCGVWPAFWMFGPNWPSSGEIDIIEGVNT
QSQVAITLHTAPGCSVTNTGSMETTLLKTADCGSGGSSGGCSQQTRGQANYGDGFNAGRGGVYATEWTSDHIAVW
FFPRSAVPPDVTAGRPDPTSWGTPMARFAGCDIDSHFTDNQLVFDTTFCGDWAGNPAVWGSDETCAAKAATCQDY
VAANPSAFRNAYWEIKSVMVYQLVAVTAAAATVERLAAVRAASAAV
Coding >Ophio5|3428
ATGCGCCTCTCTATCACTGTCATCGGCCTCGCTGGCGCTCTCATCGCCTCAGGCAAGACTCAGGCTCAGGCCACC
GCTCCTCGTTACTCGCTGTGCACCGCCTACGACCAGTCAAACTTCTTTCAGGGCTTCGACTTCTTCACCAAGCCG
GATCCCACCCGCGGCTATGTCGAGTATGTCGATCAGGTGACGGCCCGCCAGGCCGGCCTCATCGGCAACGGCGTC
ACCAACGGCACCGTCATGATGGGCGTCGATCACCACACCGTCAACCCTCCCAATGGCCGCCGTTCGGTCCGCCTC
ACGTCCAAGCAGTCTTTCACCCGCGGTCTCTTCCTGGCCGACATCGTCCACATGCCCAGCAGCACCTGCGGCGTC
TGGCCCGCCTTCTGGATGTTCGGCCCCAACTGGCCGAGTTCGGGCGAGATCGACATCATCGAGGGCGTCAACACG
CAGTCTCAGGTGGCCATTACGCTACACACGGCACCAGGCTGCAGTGTCACCAACACCGGCTCCATGGAGACGACG
TTGCTGAAGACGGCCGACTGCGGCTCTGGTGGTAGCAGCGGCGGCTGCAGCCAGCAGACGCGCGGCCAGGCCAAC
TACGGCGACGGCTTTAATGCCGGCAGAGGCGGCGTCTACGCCACCGAGTGGACCTCGGATCACATCGCCGTCTGG
TTCTTCCCCCGTTCCGCCGTTCCCCCCGACGTCACCGCCGGCAGGCCCGATCCGACGTCGTGGGGCACACCCATG
GCCCGCTTTGCCGGCTGCGACATCGACTCACACTTTACCGACAATCAGCTCGTCTTTGATACCACCTTTTGTGGC
GACTGGGCCGGCAACCCGGCCGTCTGGGGCTCCGACGAGACGTGCGCCGCCAAGGCCGCCACCTGCCAGGACTAT
GTCGCCGCCAACCCGAGTGCCTTCCGGAACGCCTACTGGGAGATCAAATCGGTCATGGTCTACCAGCTGGTTGCC
GTCACCGCCGCCGCCGCAACCGTCGAGCGTCTGGCCGCCGTACGGGCCGCCTCAGCCGCCGTA
Transcript >Ophio5|3428
ATGCGCCTCTCTATCACTGTCATCGGCCTCGCTGGCGCTCTCATCGCCTCAGGCAAGACTCAGGCTCAGGCCACC
GCTCCTCGTTACTCGCTGTGCACCGCCTACGACCAGTCAAACTTCTTTCAGGGCTTCGACTTCTTCACCAAGCCG
GATCCCACCCGCGGCTATGTCGAGTATGTCGATCAGGTGACGGCCCGCCAGGCCGGCCTCATCGGCAACGGCGTC
ACCAACGGCACCGTCATGATGGGCGTCGATCACCACACCGTCAACCCTCCCAATGGCCGCCGTTCGGTCCGCCTC
ACGTCCAAGCAGTCTTTCACCCGCGGTCTCTTCCTGGCCGACATCGTCCACATGCCCAGCAGCACCTGCGGCGTC
TGGCCCGCCTTCTGGATGTTCGGCCCCAACTGGCCGAGTTCGGGCGAGATCGACATCATCGAGGGCGTCAACACG
CAGTCTCAGGTGGCCATTACGCTACACACGGCACCAGGCTGCAGTGTCACCAACACCGGCTCCATGGAGACGACG
TTGCTGAAGACGGCCGACTGCGGCTCTGGTGGTAGCAGCGGCGGCTGCAGCCAGCAGACGCGCGGCCAGGCCAAC
TACGGCGACGGCTTTAATGCCGGCAGAGGCGGCGTCTACGCCACCGAGTGGACCTCGGATCACATCGCCGTCTGG
TTCTTCCCCCGTTCCGCCGTTCCCCCCGACGTCACCGCCGGCAGGCCCGATCCGACGTCGTGGGGCACACCCATG
GCCCGCTTTGCCGGCTGCGACATCGACTCACACTTTACCGACAATCAGCTCGTCTTTGATACCACCTTTTGTGGC
GACTGGGCCGGCAACCCGGCCGTCTGGGGCTCCGACGAGACGTGCGCCGCCAAGGCCGCCACCTGCCAGGACTAT
GTCGCCGCCAACCCGAGTGCCTTCCGGAACGCCTACTGGGAGATCAAATCGGTCATGGTCTACCAGCTGGTTGCC
GTCACCGCCGCCGCCGCAACCGTCGAGCGTCTGGCCGCCGTACGGGCCGCCTCAGCCGCCGTATGA
Gene >Ophio5|3428
ATGCGCCTCTCTATCACTGTCATCGGCCTCGCTGGCGCTCTCATCGCCTCAGGCAAGACTCAGGCTCAGGCCACC
GCTCCTCGTTACTCGCTGTGCACCGCCTACGACCAGTCAAACTTCTTTCAGGGCTTCGACTTCTTCACCAAGCCG
GATCCCACCCGCGGCTATGTCGAGTATGTCGATCAGGTGACGGCCCGCCAGGCCGGCCTCATCGGCAACGGCGTC
ACCAACGGCACCGTCATGATGGGCGTCGATCACCACACCGTCAACCCTCCCAATGGCCGCCGTTCGGTCCGCCTC
ACGTCCAAGCAGTCTTTCACCCGCGGTCTCTTCCTGGCCGACATCGTCCACATGCCCAGCAGCACCTGCGGCGTC
TGGCCCGCCTTCTGGATGTTCGGCCCCAACTGGCCGAGTTCGGGCGAGATCGACATCATCGAGGGCGTCAACACG
CAGTCTCAGGTGGCCATTACGCTACACACGGCACCAGGCTGCAGTGTCACCAACACCGGCTCCATGGAGACGACG
TTGCTGAAGACGGCCGACTGCGGCTCTGGTGGTAGCAGCGGCGGCTGCAGCCAGCAGACGCGCGGCCAGGCCAAC
TACGGCGACGGCTTTAATGCCGGCAGAGGCGGCGTCTACGCCACCGAGTGGACCTCGGATCACATCGCCGTCTGG
TTCTTCCCCCGTTCCGCCGTTCCCCCCGACGTCACCGCCGGCAGGCCCGATCCGACGTCGTGGGGCACACCCATG
GCCCGCTTTGCCGGCTGCGACATCGACTCACACTTTACCGACAATCAGCTCGTCTTTGATACCACCTTTTGTGGC
GACTGGGCCGGCAACCCGGCCGTCTGGGGCTCCGACGAGACGTGCGCCGCCAAGGCCGCCACCTGCCAGGACTAT
GTCGCCGCCAACCCGAGTGCCTTCCGGAACGCCTACTGGGAGATCAAATCGGTCATGGTCTACCAGCTGGGTCAG
CAGCAAACCCCGCCGCCGTCTCGACCGCCGTATGGGCCGCCCCAGCAGTTGCCGTCACCGCCGCCGCCGCAACCG
TCGAGCGTCTGGCCGCCGTACGGGCCGCCTCAGCCGCCGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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