Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3427
Gene name
Locationscaffold_271:20191..21670
Strand+
Gene length (bp)1479
Transcript length (bp)1365
Coding sequence length (bp)1362
Protein length (aa) 454

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05637 Glyco_transf_34 galactosyl transferase GMA12/MNN10 family 4.0E-63 151 414

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P50108|MNN10_YEAST Probable alpha-1,6-mannosyltransferase MNN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN10 PE=1 SV=1 140 435 6.0E-106
sp|P78817|YFE6_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C637.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC637.06 PE=2 SV=2 118 421 5.0E-86
sp|O94622|YBKD_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1289.13c PE=3 SV=1 178 413 5.0E-25
sp|Q09174|GMA12_SCHPO Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gma12 PE=1 SV=1 149 423 1.0E-23
sp|Q10359|GMH3_SCHPO Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh3 PE=3 SV=1 181 422 2.0E-19
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P50108|MNN10_YEAST Probable alpha-1,6-mannosyltransferase MNN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNN10 PE=1 SV=1 140 435 6.0E-106
sp|P78817|YFE6_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C637.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC637.06 PE=2 SV=2 118 421 5.0E-86
sp|O94622|YBKD_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1289.13c PE=3 SV=1 178 413 5.0E-25
sp|Q09174|GMA12_SCHPO Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gma12 PE=1 SV=1 149 423 1.0E-23
sp|Q10359|GMH3_SCHPO Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh3 PE=3 SV=1 181 422 2.0E-19
sp|Q09681|GMH2_SCHPO Probable alpha-1,2-galactosyltransferase gmh2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh2 PE=3 SV=1 178 375 3.0E-18
sp|Q09679|GMH1_SCHPO Probable alpha-1,2-galactosyltransferase gmh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh1 PE=3 SV=1 152 378 2.0E-16
sp|O13640|YGWH_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C8D2.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi048 PE=3 SV=2 181 413 2.0E-09
[Show less]

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0016757 glycosyltransferase activity Yes
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No
GO:0003824 catalytic activity No
GO:0016740 transferase activity No
GO:0005575 cellular_component No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 119 141 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3427
MSLSRSPSPVPGAGWSSPGLDMSSGKSSPANTGGPWQSSRTRHLALKGYPSFSTHNQGFFSRHMRRLSSGLPLFN
SGSDACRSEKDKSGNGRWSARNIPLVWRLRSVLGRMGRKLKLRLLVALIVLACMLAVYNSPLLRFWRRSPWGGDG
EKFVIILAANVGGGVMEWKGAREWAIERDSVRNKRKYASRWGYDLEIVDMSTKKKYAHEWRESWEKVDFMRAAMR
KYPRAEWFWWLDLNTYIMEPTRSLQSHLFDDLGSWVYRDINVFNPLNVTHPFGDPYLDPESRSAVGDGNIKSVNL
LLSQDCSGFNLGSFFLRRSAWTERLLDIWWDPVAYEQKHMEWDHKEQDALEQLYRSQPWVRKHTAFLPQRRINSF
PPAACADGSGKNHTRYHYNEHDRDFLVNMAGCEWGRDCWGEMYHYREFSYWLNRNPWERFKEDIVAVIWFKLTGH
WVKL
Coding >Ophio5|3427
ATGTCCCTGTCCCGCAGCCCGTCGCCGGTGCCGGGCGCCGGCTGGTCCAGTCCCGGCCTTGACATGAGCAGCGGT
AAGAGCAGTCCTGCCAATACCGGTGGCCCCTGGCAGTCGTCCAGGACGAGGCATCTGGCCCTCAAAGGCTATCCG
TCCTTTTCGACACATAACCAGGGCTTCTTCTCCCGTCACATGCGACGCCTATCCAGTGGCCTGCCGCTCTTCAAC
TCTGGCTCCGATGCCTGTCGCTCAGAAAAGGATAAGTCGGGCAACGGCCGGTGGTCGGCCCGGAACATACCCTTA
GTTTGGAGGTTACGATCCGTGTTAGGGCGCATGGGGCGCAAGCTCAAGTTGAGACTTCTTGTCGCCTTGATTGTT
CTGGCCTGCATGCTTGCCGTGTACAATTCTCCACTGCTACGCTTTTGGCGTAGATCACCATGGGGCGGCGACGGC
GAAAAGTTCGTCATCATCCTGGCCGCCAACGTCGGTGGAGGCGTCATGGAGTGGAAGGGCGCCCGGGAATGGGCC
ATCGAGCGCGACAGCGTGCGAAACAAGCGCAAATATGCCTCGAGATGGGGCTACGACCTGGAGATTGTCGACATG
AGCACCAAGAAGAAGTACGCGCACGAGTGGCGAGAGAGCTGGGAAAAGGTCGACTTTATGCGGGCCGCCATGCGG
AAATACCCCAGGGCTGAGTGGTTCTGGTGGCTCGACCTCAACACATACATTATGGAACCGACGCGCTCGCTGCAG
AGTCATCTGTTTGACGACCTCGGCTCGTGGGTGTACCGCGACATCAACGTGTTCAACCCCCTCAACGTCACCCAT
CCCTTTGGCGACCCTTACCTGGACCCCGAGTCGCGAAGCGCCGTGGGCGACGGCAATATCAAGTCTGTGAATCTG
CTGCTGTCGCAGGACTGCTCCGGCTTCAACTTGGGTTCCTTCTTTTTGCGTCGCAGCGCCTGGACGGAACGCCTG
CTGGACATCTGGTGGGACCCCGTGGCATACGAGCAGAAGCACATGGAGTGGGATCACAAGGAGCAGGACGCGCTC
GAGCAGTTGTATCGGAGCCAGCCGTGGGTGAGGAAGCACACGGCCTTTTTGCCGCAGCGCAGGATCAACAGCTTC
CCGCCGGCGGCCTGCGCGGACGGGAGTGGCAAGAATCACACTCGGTACCACTACAACGAGCATGATCGCGACTTT
CTCGTCAACATGGCCGGCTGCGAATGGGGCCGCGACTGCTGGGGCGAGATGTACCACTACCGCGAGTTTAGCTAC
TGGCTCAACCGCAACCCGTGGGAGCGCTTCAAGGAAGACATTGTTGCCGTCATCTGGTTCAAGCTTACGGGGCAC
TGGGTCAAGTTG
Transcript >Ophio5|3427
ATGTCCCTGTCCCGCAGCCCGTCGCCGGTGCCGGGCGCCGGCTGGTCCAGTCCCGGCCTTGACATGAGCAGCGGT
AAGAGCAGTCCTGCCAATACCGGTGGCCCCTGGCAGTCGTCCAGGACGAGGCATCTGGCCCTCAAAGGCTATCCG
TCCTTTTCGACACATAACCAGGGCTTCTTCTCCCGTCACATGCGACGCCTATCCAGTGGCCTGCCGCTCTTCAAC
TCTGGCTCCGATGCCTGTCGCTCAGAAAAGGATAAGTCGGGCAACGGCCGGTGGTCGGCCCGGAACATACCCTTA
GTTTGGAGGTTACGATCCGTGTTAGGGCGCATGGGGCGCAAGCTCAAGTTGAGACTTCTTGTCGCCTTGATTGTT
CTGGCCTGCATGCTTGCCGTGTACAATTCTCCACTGCTACGCTTTTGGCGTAGATCACCATGGGGCGGCGACGGC
GAAAAGTTCGTCATCATCCTGGCCGCCAACGTCGGTGGAGGCGTCATGGAGTGGAAGGGCGCCCGGGAATGGGCC
ATCGAGCGCGACAGCGTGCGAAACAAGCGCAAATATGCCTCGAGATGGGGCTACGACCTGGAGATTGTCGACATG
AGCACCAAGAAGAAGTACGCGCACGAGTGGCGAGAGAGCTGGGAAAAGGTCGACTTTATGCGGGCCGCCATGCGG
AAATACCCCAGGGCTGAGTGGTTCTGGTGGCTCGACCTCAACACATACATTATGGAACCGACGCGCTCGCTGCAG
AGTCATCTGTTTGACGACCTCGGCTCGTGGGTGTACCGCGACATCAACGTGTTCAACCCCCTCAACGTCACCCAT
CCCTTTGGCGACCCTTACCTGGACCCCGAGTCGCGAAGCGCCGTGGGCGACGGCAATATCAAGTCTGTGAATCTG
CTGCTGTCGCAGGACTGCTCCGGCTTCAACTTGGGTTCCTTCTTTTTGCGTCGCAGCGCCTGGACGGAACGCCTG
CTGGACATCTGGTGGGACCCCGTGGCATACGAGCAGAAGCACATGGAGTGGGATCACAAGGAGCAGGACGCGCTC
GAGCAGTTGTATCGGAGCCAGCCGTGGGTGAGGAAGCACACGGCCTTTTTGCCGCAGCGCAGGATCAACAGCTTC
CCGCCGGCGGCCTGCGCGGACGGGAGTGGCAAGAATCACACTCGGTACCACTACAACGAGCATGATCGCGACTTT
CTCGTCAACATGGCCGGCTGCGAATGGGGCCGCGACTGCTGGGGCGAGATGTACCACTACCGCGAGTTTAGCTAC
TGGCTCAACCGCAACCCGTGGGAGCGCTTCAAGGAAGACATTGTTGCCGTCATCTGGTTCAAGCTTACGGGGCAC
TGGGTCAAGTTGTAG
Gene >Ophio5|3427
ATGTCCCTGTCCCGCAGCCCGTCGCCGGTGCCGGGCGCCGGCTGGTCCAGTCCCGGCCTTGACATGAGCAGCGGT
AAGAGCAGTCCTGCCAATACCGGTGGCCCCTGGCAGTCGTCCAGGACGAGGCATCTGGCCCTCAAAGGCTATCCG
TCCTTTTCGACACATAACCAGGGCTTCTTCTCCCGTCACATGCGACGCCTATCCAGTGGCCTGCCGCTCTTCAAC
TCTGGCTCCGATGCCTGTCGCTCAGAAAAGGATAAGTCGGGCAACGGCCGGTGGTCGGCCCGGAACATACCCTTA
GTTTGGAGGTTACGATCCGTGTTAGGGCGCATGGGGCGCAAGCTCAAGTTGAGACTTCTTGTCGCCTTGATTGTT
CTGGCCTGCATGCTTGCCGTGTACAATTCTCGTGAGTCTTACTGTCCGCCGATCCGTCGTCGATGCTAACGGAGC
CCCCCCCCCCCCCCCTCCCAGCACTGCTACGCTTTTGGCGTAGATCACCATGGGGCGGCGACGGCGAAAAGTTCG
TCATCATCCTGGCCGCCAACGTCGGTGGAGGCGTCATGGAGTGGAAGGGCGCCCGGGAATGGGCCATCGAGCGCG
ACAGCGTGCGAAACAAGCGCAAATATGCCTCGAGATGGGGCTACGACCTGGAGATTGTCGACATGAGCACCAAGA
AGAAGTACGCGCACGAGTGGCGAGAGAGCTGGGAAAAGGTCGACTTTATGCGGGCCGCCATGCGGAAATACCCCA
GGGCTGAGTGGTGAGCGAGGCCGGTGCCGGTCCAGCTACCCTGGCTAACCCGTCGTCAGGTTCTGGTGGCTCGAC
CTCAACACATACATTATGGAACCGACGCGCTCGCTGCAGAGTCATCTGTTTGACGACCTCGGCTCGTGGGTGTAC
CGCGACATCAACGTGTTCAACCCCCTCAACGTCACCCATCCCTTTGGCGACCCTTACCTGGACCCCGAGTCGCGA
AGCGCCGTGGGCGACGGCAATATCAAGTCTGTGAATCTGCTGCTGTCGCAGGACTGCTCCGGCTTCAACTTGGGT
TCCTTCTTTTTGCGTCGCAGCGCCTGGACGGAACGCCTGCTGGACATCTGGTGGGACCCCGTGGCATACGAGCAG
AAGCACATGGAGTGGGATCACAAGGAGCAGGACGCGCTCGAGCAGTTGTATCGGAGCCAGCCGTGGGTGAGGAAG
CACACGGCCTTTTTGCCGCAGCGCAGGATCAACAGCTTCCCGCCGGCGGCCTGCGCGGACGGGAGTGGCAAGAAT
CACACTCGGTACCACTACAACGAGCATGATCGCGACTTTCTCGTCAACATGGCCGGCTGCGAATGGGGCCGCGAC
TGCTGGGGCGAGATGTACCACTACCGCGAGTTTAGCTACTGGCTCAACCGCAACCCGTGGGAGCGCTTCAAGGAA
GACATTGTTGCCGTCATCTGGTTCAAGCTTACGGGGCACTGGGTCAAGTTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail