Protein ID | Ophio5|3397 |
Gene name | |
Location | scaffold_27:32914..34038 |
Strand | - |
Gene length (bp) | 1124 |
Transcript length (bp) | 939 |
Coding sequence length (bp) | 936 |
Protein length (aa) | 312 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13460 | NAD_binding_10 | NAD(P)H-binding | 1.2E-06 | 14 | 153 |
PF02254 | TrkA_N | TrkA-N domain | 5.0E-06 | 8 | 82 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|E1U332|ALL12_OLEEU | Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1 | 1 | 250 | 1.0E-08 |
sp|P52578|IFRH_SOLTU | Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1 | 1 | 251 | 2.0E-08 |
sp|O65679|PILR3_ARATH | Probable pinoresinol-lariciresinol reductase 3 OS=Arabidopsis thaliana GN=PLR3 PE=3 SV=2 | 6 | 269 | 2.0E-07 |
sp|P52576|IFR_PEA | Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1 | 1 | 265 | 1.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006813 | potassium ion transport | Yes |
GO:0006812 | cation transport | No |
GO:0006811 | ion transport | No |
GO:0051234 | establishment of localization | No |
GO:0006810 | transport | No |
GO:0030001 | metal ion transport | No |
GO:0051179 | localization | No |
GO:0008150 | biological_process | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.6161 | 0.3531 | 0.1034 | 0.0321 | 0.1008 | 0.006 | 0.0703 | 0.0741 | 0.1789 | 0.0058 |
Gene cluster ID | Type of secondary metabolism gene |
---|---|
Cluster 10 | (None) |
Orthofinder run ID | 4 |
Orthogroup | 5623 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3397 MADTQQIIALCSVGNLGKYLCDELLADGRYKFFVISRQSNKAAFFQDRNIDVRTSDYSKESILEILNQTNASALI SFNNSDGQTFVDVHRAFLDACRLSSNCKRFIPSEFAGNIDDFPLSPSYFEESRVPFRKILEKEEEVEWTIFNNGW LMDYFLTADKSYMPSIPKEFPVDPNGWRACIRGTGEQVQSFTSGRDVAKALIMLLDAPEWERTTYVTGQWSTFNE MVKSMEVFYGRPMEKTYRSEEDIHRDTLLPPTAENYEALYLASVEEMMLTASGACPRDKTMRQREKFFRGLNFIT LEELLLQSQSKI |
Coding | >Ophio5|3397 ATGGCTGATACACAACAAATCATTGCTCTATGCTCTGTAGGAAACCTCGGCAAGTACCTCTGCGATGAATTGCTC GCCGACGGCCGCTACAAGTTTTTCGTCATCTCCCGTCAATCCAACAAAGCGGCGTTTTTTCAGGACCGCAACATA GATGTGCGCACGAGCGACTACAGCAAGGAATCGATTCTGGAGATTTTGAACCAGACTAATGCCAGTGCCCTGATA TCCTTCAACAACAGCGATGGCCAAACCTTTGTTGATGTGCACCGCGCCTTTTTGGACGCTTGTCGCTTGTCATCG AATTGCAAGCGATTCATTCCCTCCGAATTCGCCGGCAACATCGATGATTTTCCGCTTTCTCCGAGCTACTTTGAG GAATCAAGAGTACCGTTTCGGAAAATTCTTGAAAAAGAGGAGGAAGTCGAGTGGACAATCTTTAACAACGGCTGG CTGATGGATTACTTCTTGACCGCTGACAAGTCATACATGCCCTCGATCCCAAAGGAATTCCCAGTTGACCCAAAT GGCTGGAGGGCGTGTATTAGGGGAACCGGAGAACAGGTGCAATCCTTTACAAGCGGTCGAGATGTGGCCAAGGCG CTCATAATGCTGCTCGACGCGCCAGAATGGGAACGCACAACTTATGTCACAGGCCAGTGGTCTACATTCAATGAA ATGGTCAAGTCTATGGAAGTGTTTTATGGCCGACCGATGGAGAAGACATACAGGTCGGAAGAGGACATTCATCGC GATACTTTGCTGCCCCCGACGGCGGAAAACTATGAAGCTCTCTACCTCGCAAGTGTAGAGGAGATGATGCTTACA GCCTCGGGCGCATGTCCTCGGGACAAGACCATGCGGCAGAGAGAAAAATTCTTTCGTGGACTCAACTTCATCACC CTGGAGGAGCTTTTATTACAGTCGCAGTCCAAGATT |
Transcript | >Ophio5|3397 ATGGCTGATACACAACAAATCATTGCTCTATGCTCTGTAGGAAACCTCGGCAAGTACCTCTGCGATGAATTGCTC GCCGACGGCCGCTACAAGTTTTTCGTCATCTCCCGTCAATCCAACAAAGCGGCGTTTTTTCAGGACCGCAACATA GATGTGCGCACGAGCGACTACAGCAAGGAATCGATTCTGGAGATTTTGAACCAGACTAATGCCAGTGCCCTGATA TCCTTCAACAACAGCGATGGCCAAACCTTTGTTGATGTGCACCGCGCCTTTTTGGACGCTTGTCGCTTGTCATCG AATTGCAAGCGATTCATTCCCTCCGAATTCGCCGGCAACATCGATGATTTTCCGCTTTCTCCGAGCTACTTTGAG GAATCAAGAGTACCGTTTCGGAAAATTCTTGAAAAAGAGGAGGAAGTCGAGTGGACAATCTTTAACAACGGCTGG CTGATGGATTACTTCTTGACCGCTGACAAGTCATACATGCCCTCGATCCCAAAGGAATTCCCAGTTGACCCAAAT GGCTGGAGGGCGTGTATTAGGGGAACCGGAGAACAGGTGCAATCCTTTACAAGCGGTCGAGATGTGGCCAAGGCG CTCATAATGCTGCTCGACGCGCCAGAATGGGAACGCACAACTTATGTCACAGGCCAGTGGTCTACATTCAATGAA ATGGTCAAGTCTATGGAAGTGTTTTATGGCCGACCGATGGAGAAGACATACAGGTCGGAAGAGGACATTCATCGC GATACTTTGCTGCCCCCGACGGCGGAAAACTATGAAGCTCTCTACCTCGCAAGTGTAGAGGAGATGATGCTTACA GCCTCGGGCGCATGTCCTCGGGACAAGACCATGCGGCAGAGAGAAAAATTCTTTCGTGGACTCAACTTCATCACC CTGGAGGAGCTTTTATTACAGTCGCAGTCCAAGATTTAG |
Gene | >Ophio5|3397 ATGGCTGATACACAACAAATCATTGCTCTATGCTCTGTAGGAAACCTCGGCAAGTACCTCTGCGATGAATTGCTC GCCGACGGCCGCTACAAGTTTTTCGTCATCTCCCGTCAAGTGAGTCTCAGTTATCTCAGTTATAGACATATAACA GGTTTTTGGTTGACCTCTTTCTAACGTGATCAAGTCCAACAAAGCGGCGTTTTTTCAGGACCGCAACATAGATGT GCGCACGAGCGACTACAGCAAGGAATCGATTCTGGAGATTTTGAACCAGACTAATGCCAGTGCCCTGATATCCTT CAACAACAGCGATGGCCAAACCTTTGTTGATGTGCACCGCGCCTTTTTGGACGCTTGTCGCTTGTCATCGAATTG CAAGCGATTCATTCCCTCCGAATTCGCCGGCAACATCGATGATTTTCCGCTTTCTCCGAGCTACTTTGAGGAATC AAGAGTACCGTTTCGGAAAATTCTTGAAAAAGAGGAGGAAGTCGAGTGGACAATCTTTAACAACGGCTGGCTGAT GGATTACTTCTTGACCGCTGACAAGTCATACATGCCCTCGATCCCAAAGGAATTCCCAGTTGACCCAAATGGCTG GAGGGCGTGTATTAGGGGAACCGGAGAACAGGTGCAATCCTTTACAAGCGGTCGAGATGTGGCCAAGGCGCTCAT AATGCTGCTCGACGCGCCAGAATGGGTCAGTCACATACTCGAAGACGATAGTGTGTGTCTACGTCTGCTTAACGT CTACTTACCAGGAACGCACAACTTATGTCACAGGCCAGTGGTCTACATTCAATGAAATGGTCAAGTCTATGGAAG TGTTTTATGGTTTGTCTTAGACTCCCATTTCGGGAAAGACTGCTTGGCTAAGACGAGTTCTAGGCCGACCGATGG AGAAGACATACAGGTCGGAAGAGGACATTCATCGCGATACTTTGCTGCCCCCGACGGCGGAAAACTATGAAGCTC TCTACCTCGCAAGTGTAGAGGAGATGATGCTTACAGCCTCGGGCGCATGTCCTCGGGACAAGACCATGCGGCAGA GAGAAAAATTCTTTCGTGGACTCAACTTCATCACCCTGGAGGAGCTTTTATTACAGTCGCAGTCCAAGATTTAG |