Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3369
Gene name
Locationscaffold_268:6940..7795
Strand-
Gene length (bp)855
Transcript length (bp)855
Coding sequence length (bp)852
Protein length (aa) 284

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13883 Pyrid_oxidase_2 Pyridoxamine 5'-phosphate oxidase 1.0E-36 34 254

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3369
MKPLAFTVALSGLASAFRPPQIVFENAPRAAGIPTSRQSAVLGRRILALSKLATFSTVFPNPGPDALEIYDESDA
SSGRPDNLAGVPVGLVDYVADCEDQGNPTVLAVDIGTSFRNVQAGSKLTISMSWTPPYPPAKRLPFLSRILVYVP
IFPRPRYNMQPEGAHVPDTVPYSAANLPRFSLFGYLEPVGPSRSKRMELASCYVERHQDAKIWLPGTDAPHKTEW
NRFVVTAIYWVGGFGDRAYIGWIPVDQWRNVTRDEWESVRLPGERKGWDEHQRWDQGDL
Coding >Ophio5|3369
ATGAAACCCCTCGCCTTCACAGTCGCCCTGTCTGGGCTCGCTTCGGCCTTCCGCCCGCCTCAGATCGTCTTCGAG
AACGCCCCTCGGGCTGCCGGCATCCCGACCAGTCGCCAATCTGCCGTCCTGGGCCGTCGCATCCTGGCCTTGTCC
AAGCTGGCCACCTTTTCCACCGTCTTCCCTAATCCCGGGCCCGACGCGCTCGAAATCTATGACGAATCCGACGCG
TCGTCCGGGCGACCTGACAACCTGGCCGGTGTGCCTGTCGGACTCGTCGACTATGTCGCCGACTGCGAGGACCAA
GGCAATCCCACCGTGCTGGCCGTCGACATCGGAACCAGCTTCCGGAACGTACAGGCCGGCTCGAAACTCACAATC
TCCATGAGCTGGACCCCTCCGTACCCCCCGGCCAAGCGTCTGCCCTTCCTATCCCGTATCTTGGTCTACGTGCCG
ATTTTTCCTCGCCCCCGCTACAACATGCAGCCGGAGGGCGCGCACGTGCCGGACACGGTGCCCTATTCGGCCGCC
AACCTGCCGCGCTTCTCCTTGTTCGGCTACCTGGAACCAGTTGGCCCCTCGAGATCCAAGAGGATGGAGCTGGCC
AGCTGTTACGTCGAGAGACACCAGGACGCCAAGATCTGGCTTCCCGGCACCGACGCCCCGCACAAGACGGAGTGG
AACAGGTTTGTCGTCACGGCCATCTACTGGGTCGGGGGCTTCGGAGACAGGGCCTACATCGGCTGGATCCCTGTG
GACCAGTGGCGCAATGTGACGAGGGACGAATGGGAATCTGTCCGGCTCCCCGGCGAGCGCAAGGGTTGGGACGAG
CACCAGCGCTGGGACCAAGGCGACCTG
Transcript >Ophio5|3369
ATGAAACCCCTCGCCTTCACAGTCGCCCTGTCTGGGCTCGCTTCGGCCTTCCGCCCGCCTCAGATCGTCTTCGAG
AACGCCCCTCGGGCTGCCGGCATCCCGACCAGTCGCCAATCTGCCGTCCTGGGCCGTCGCATCCTGGCCTTGTCC
AAGCTGGCCACCTTTTCCACCGTCTTCCCTAATCCCGGGCCCGACGCGCTCGAAATCTATGACGAATCCGACGCG
TCGTCCGGGCGACCTGACAACCTGGCCGGTGTGCCTGTCGGACTCGTCGACTATGTCGCCGACTGCGAGGACCAA
GGCAATCCCACCGTGCTGGCCGTCGACATCGGAACCAGCTTCCGGAACGTACAGGCCGGCTCGAAACTCACAATC
TCCATGAGCTGGACCCCTCCGTACCCCCCGGCCAAGCGTCTGCCCTTCCTATCCCGTATCTTGGTCTACGTGCCG
ATTTTTCCTCGCCCCCGCTACAACATGCAGCCGGAGGGCGCGCACGTGCCGGACACGGTGCCCTATTCGGCCGCC
AACCTGCCGCGCTTCTCCTTGTTCGGCTACCTGGAACCAGTTGGCCCCTCGAGATCCAAGAGGATGGAGCTGGCC
AGCTGTTACGTCGAGAGACACCAGGACGCCAAGATCTGGCTTCCCGGCACCGACGCCCCGCACAAGACGGAGTGG
AACAGGTTTGTCGTCACGGCCATCTACTGGGTCGGGGGCTTCGGAGACAGGGCCTACATCGGCTGGATCCCTGTG
GACCAGTGGCGCAATGTGACGAGGGACGAATGGGAATCTGTCCGGCTCCCCGGCGAGCGCAAGGGTTGGGACGAG
CACCAGCGCTGGGACCAAGGCGACCTGTGA
Gene >Ophio5|3369
ATGAAACCCCTCGCCTTCACAGTCGCCCTGTCTGGGCTCGCTTCGGCCTTCCGCCCGCCTCAGATCGTCTTCGAG
AACGCCCCTCGGGCTGCCGGCATCCCGACCAGTCGCCAATCTGCCGTCCTGGGCCGTCGCATCCTGGCCTTGTCC
AAGCTGGCCACCTTTTCCACCGTCTTCCCTAATCCCGGGCCCGACGCGCTCGAAATCTATGACGAATCCGACGCG
TCGTCCGGGCGACCTGACAACCTGGCCGGTGTGCCTGTCGGACTCGTCGACTATGTCGCCGACTGCGAGGACCAA
GGCAATCCCACCGTGCTGGCCGTCGACATCGGAACCAGCTTCCGGAACGTACAGGCCGGCTCGAAACTCACAATC
TCCATGAGCTGGACCCCTCCGTACCCCCCGGCCAAGCGTCTGCCCTTCCTATCCCGTATCTTGGTCTACGTGCCG
ATTTTTCCTCGCCCCCGCTACAACATGCAGCCGGAGGGCGCGCACGTGCCGGACACGGTGCCCTATTCGGCCGCC
AACCTGCCGCGCTTCTCCTTGTTCGGCTACCTGGAACCAGTTGGCCCCTCGAGATCCAAGAGGATGGAGCTGGCC
AGCTGTTACGTCGAGAGACACCAGGACGCCAAGATCTGGCTTCCCGGCACCGACGCCCCGCACAAGACGGAGTGG
AACAGGTTTGTCGTCACGGCCATCTACTGGGTCGGGGGCTTCGGAGACAGGGCCTACATCGGCTGGATCCCTGTG
GACCAGTGGCGCAATGTGACGAGGGACGAATGGGAATCTGTCCGGCTCCCCGGCGAGCGCAAGGGTTGGGACGAG
CACCAGCGCTGGGACCAAGGCGACCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail