Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3363
Gene name
Locationscaffold_267:16845..18114
Strand-
Gene length (bp)1269
Transcript length (bp)1269
Coding sequence length (bp)1266
Protein length (aa) 422

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19189 Mtf2 Mtf2 family 8.0E-21 193 378

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005739 mitochondrion Yes
GO:0110165 cellular anatomical entity No
GO:0043227 membrane-bounded organelle No
GO:0005575 cellular_component No
GO:0043229 intracellular organelle No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043226 organelle No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3363
MLLSLRPARTPWRQLVTPALTRLSRRAHSDRNEHQHDHAIPFDWGENNSFDGQETVRSENSTITPSEAYIFKSIF
EEIATGRMPQSRRQGFRYNGKSEDQSGSDLSPRKHKGSLARSIVEQARINEFREKFLVRYPPYLQAAAKMALRMF
DAKPGTPDKESTQKLTETDEKVLEEAAKYEAARTDERIRVEALMKGCATDVALWQIMEDEVFSLPCKLGIVQGEQ
RGHGTKAVVTAVVGAKKRGRSPKKVVDAKRTAGEDDATKGAPVKADSQKLSMDVHGPLYPHFLELGLDLFDNLFA
RPSPYALQILPRIKALGLCSYVLGVSTPFYVRLARIHWNRYGDAATALDVLQELSDSGLYVDVDVMSLLTQIRDN
LHGCTWGAQGPFVMKMMEFPPYDGSLTRRLEKMLDEVKKTLQQDVAQ
Coding >Ophio5|3363
ATGCTTCTTTCCCTTCGCCCTGCCCGGACCCCATGGCGACAGCTTGTCACTCCCGCCCTCACTCGGCTCTCTCGG
CGTGCTCATTCGGACCGCAACGAACACCAGCATGACCATGCGATTCCCTTCGATTGGGGCGAGAACAATAGCTTT
GACGGGCAGGAAACGGTTCGCAGCGAAAACTCGACCATAACACCGTCGGAAGCCTATATATTCAAGAGCATTTTC
GAGGAAATCGCTACGGGGCGGATGCCACAGTCCAGGCGGCAAGGTTTTCGCTACAACGGTAAATCAGAAGACCAG
AGCGGCAGCGATCTCAGCCCCAGAAAGCACAAAGGCAGCCTGGCGCGGTCCATCGTCGAACAAGCGCGCATCAAC
GAGTTCCGCGAGAAATTTCTCGTTCGCTACCCGCCGTACCTCCAGGCGGCCGCCAAGATGGCCTTGCGCATGTTC
GATGCGAAACCTGGGACGCCGGATAAAGAAAGTACGCAGAAGTTGACGGAGACTGACGAAAAAGTACTGGAGGAA
GCTGCGAAATACGAAGCGGCGAGAACGGATGAGCGCATTCGCGTCGAAGCCTTGATGAAGGGCTGTGCAACCGAC
GTCGCCTTGTGGCAAATCATGGAAGACGAGGTGTTTTCTTTGCCATGCAAGCTGGGCATCGTACAGGGCGAGCAG
CGAGGACATGGAACCAAAGCAGTGGTTACGGCTGTCGTAGGCGCTAAGAAGCGCGGTCGGTCGCCAAAGAAGGTT
GTCGACGCAAAGCGAACCGCAGGCGAGGACGACGCTACAAAGGGCGCACCGGTGAAGGCCGACAGCCAGAAGCTG
AGCATGGACGTCCACGGGCCGCTGTATCCTCACTTTCTCGAGCTGGGCTTGGATCTATTCGACAATCTCTTTGCC
CGGCCGTCGCCCTACGCTCTGCAGATACTGCCTCGCATCAAGGCGCTGGGCCTCTGCTCGTACGTGCTAGGCGTT
TCGACGCCATTTTACGTCCGGCTCGCCAGGATTCACTGGAACCGGTACGGCGACGCCGCCACCGCGCTCGACGTG
CTGCAGGAGTTGAGCGACTCCGGGCTGTACGTCGACGTCGACGTCATGTCGCTACTGACCCAGATTCGAGACAAC
CTGCACGGGTGCACCTGGGGCGCGCAGGGGCCGTTTGTAATGAAAATGATGGAATTTCCACCATACGATGGCTCT
TTGACCCGGCGGCTTGAAAAGATGCTGGACGAAGTGAAGAAGACGCTTCAACAGGACGTGGCCCAA
Transcript >Ophio5|3363
ATGCTTCTTTCCCTTCGCCCTGCCCGGACCCCATGGCGACAGCTTGTCACTCCCGCCCTCACTCGGCTCTCTCGG
CGTGCTCATTCGGACCGCAACGAACACCAGCATGACCATGCGATTCCCTTCGATTGGGGCGAGAACAATAGCTTT
GACGGGCAGGAAACGGTTCGCAGCGAAAACTCGACCATAACACCGTCGGAAGCCTATATATTCAAGAGCATTTTC
GAGGAAATCGCTACGGGGCGGATGCCACAGTCCAGGCGGCAAGGTTTTCGCTACAACGGTAAATCAGAAGACCAG
AGCGGCAGCGATCTCAGCCCCAGAAAGCACAAAGGCAGCCTGGCGCGGTCCATCGTCGAACAAGCGCGCATCAAC
GAGTTCCGCGAGAAATTTCTCGTTCGCTACCCGCCGTACCTCCAGGCGGCCGCCAAGATGGCCTTGCGCATGTTC
GATGCGAAACCTGGGACGCCGGATAAAGAAAGTACGCAGAAGTTGACGGAGACTGACGAAAAAGTACTGGAGGAA
GCTGCGAAATACGAAGCGGCGAGAACGGATGAGCGCATTCGCGTCGAAGCCTTGATGAAGGGCTGTGCAACCGAC
GTCGCCTTGTGGCAAATCATGGAAGACGAGGTGTTTTCTTTGCCATGCAAGCTGGGCATCGTACAGGGCGAGCAG
CGAGGACATGGAACCAAAGCAGTGGTTACGGCTGTCGTAGGCGCTAAGAAGCGCGGTCGGTCGCCAAAGAAGGTT
GTCGACGCAAAGCGAACCGCAGGCGAGGACGACGCTACAAAGGGCGCACCGGTGAAGGCCGACAGCCAGAAGCTG
AGCATGGACGTCCACGGGCCGCTGTATCCTCACTTTCTCGAGCTGGGCTTGGATCTATTCGACAATCTCTTTGCC
CGGCCGTCGCCCTACGCTCTGCAGATACTGCCTCGCATCAAGGCGCTGGGCCTCTGCTCGTACGTGCTAGGCGTT
TCGACGCCATTTTACGTCCGGCTCGCCAGGATTCACTGGAACCGGTACGGCGACGCCGCCACCGCGCTCGACGTG
CTGCAGGAGTTGAGCGACTCCGGGCTGTACGTCGACGTCGACGTCATGTCGCTACTGACCCAGATTCGAGACAAC
CTGCACGGGTGCACCTGGGGCGCGCAGGGGCCGTTTGTAATGAAAATGATGGAATTTCCACCATACGATGGCTCT
TTGACCCGGCGGCTTGAAAAGATGCTGGACGAAGTGAAGAAGACGCTTCAACAGGACGTGGCCCAATAA
Gene >Ophio5|3363
ATGCTTCTTTCCCTTCGCCCTGCCCGGACCCCATGGCGACAGCTTGTCACTCCCGCCCTCACTCGGCTCTCTCGG
CGTGCTCATTCGGACCGCAACGAACACCAGCATGACCATGCGATTCCCTTCGATTGGGGCGAGAACAATAGCTTT
GACGGGCAGGAAACGGTTCGCAGCGAAAACTCGACCATAACACCGTCGGAAGCCTATATATTCAAGAGCATTTTC
GAGGAAATCGCTACGGGGCGGATGCCACAGTCCAGGCGGCAAGGTTTTCGCTACAACGGTAAATCAGAAGACCAG
AGCGGCAGCGATCTCAGCCCCAGAAAGCACAAAGGCAGCCTGGCGCGGTCCATCGTCGAACAAGCGCGCATCAAC
GAGTTCCGCGAGAAATTTCTCGTTCGCTACCCGCCGTACCTCCAGGCGGCCGCCAAGATGGCCTTGCGCATGTTC
GATGCGAAACCTGGGACGCCGGATAAAGAAAGTACGCAGAAGTTGACGGAGACTGACGAAAAAGTACTGGAGGAA
GCTGCGAAATACGAAGCGGCGAGAACGGATGAGCGCATTCGCGTCGAAGCCTTGATGAAGGGCTGTGCAACCGAC
GTCGCCTTGTGGCAAATCATGGAAGACGAGGTGTTTTCTTTGCCATGCAAGCTGGGCATCGTACAGGGCGAGCAG
CGAGGACATGGAACCAAAGCAGTGGTTACGGCTGTCGTAGGCGCTAAGAAGCGCGGTCGGTCGCCAAAGAAGGTT
GTCGACGCAAAGCGAACCGCAGGCGAGGACGACGCTACAAAGGGCGCACCGGTGAAGGCCGACAGCCAGAAGCTG
AGCATGGACGTCCACGGGCCGCTGTATCCTCACTTTCTCGAGCTGGGCTTGGATCTATTCGACAATCTCTTTGCC
CGGCCGTCGCCCTACGCTCTGCAGATACTGCCTCGCATCAAGGCGCTGGGCCTCTGCTCGTACGTGCTAGGCGTT
TCGACGCCATTTTACGTCCGGCTCGCCAGGATTCACTGGAACCGGTACGGCGACGCCGCCACCGCGCTCGACGTG
CTGCAGGAGTTGAGCGACTCCGGGCTGTACGTCGACGTCGACGTCATGTCGCTACTGACCCAGATTCGAGACAAC
CTGCACGGGTGCACCTGGGGCGCGCAGGGGCCGTTTGTAATGAAAATGATGGAATTTCCACCATACGATGGCTCT
TTGACCCGGCGGCTTGAAAAGATGCTGGACGAAGTGAAGAAGACGCTTCAACAGGACGTGGCCCAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail