Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3350
Gene name
Locationscaffold_266:4488..5529
Strand+
Gene length (bp)1041
Transcript length (bp)1041
Coding sequence length (bp)1038
Protein length (aa) 346

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 52 74 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3350
MAPVTGAGTPGWDMLFPRTEGAGLYGRDDGDKSGGNKPGHGVLDPHDINNAGFFVLFALIGLGLVITGIWFFFWA
RNGGMHFKATDWDDYKSTVLRRKSANGTLLSGATPSTQLGGGSVYKDVEDQAATETVSGITAGASDVVAREKRKQ
KQKRRDEERKKKKKKEEEEKTKEKKQEGGDGGRRVRGEDGVVEDEMAEKAAQKELRSYRHEKPARVGGLNRQADG
VEWDGAGTTTTNTNTNNSESASQRTRIQGGIRKVYSTTTSSAASDRVRAEARRLREESRHGRRDLRDSALSESLL
EESSSTVGTKSYHHPMPELRERERRRREREERRERRGGGYRREEEG
Coding >Ophio5|3350
ATGGCCCCGGTCACCGGCGCCGGCACCCCAGGCTGGGACATGCTGTTCCCCCGGACCGAGGGCGCCGGGCTGTAC
GGGCGTGACGATGGAGACAAAAGCGGCGGAAACAAACCGGGCCACGGGGTACTAGACCCGCACGATATCAACAAC
GCTGGCTTCTTCGTGCTCTTCGCCCTCATCGGCTTGGGCCTCGTCATCACGGGTATCTGGTTCTTCTTCTGGGCA
CGCAACGGAGGAATGCACTTCAAGGCGACGGACTGGGACGACTACAAGTCAACGGTGCTGCGACGCAAGAGCGCC
AACGGGACGCTCCTATCGGGGGCGACGCCGTCGACGCAGCTCGGCGGCGGCAGCGTCTACAAGGACGTCGAGGAC
CAGGCGGCGACGGAGACGGTCAGTGGCATCACGGCGGGAGCCAGCGACGTGGTGGCGCGGGAGAAGCGAAAGCAG
AAGCAGAAGCGACGGGACGAGGAGAGGAAGAAGAAGAAGAAGAAGGAGGAAGAGGAGAAGACGAAAGAAAAGAAG
CAGGAAGGTGGCGACGGAGGACGGCGAGTGCGTGGCGAAGATGGTGTAGTGGAGGATGAGATGGCGGAGAAGGCG
GCCCAGAAGGAGCTTCGCAGCTATCGTCATGAGAAGCCGGCGCGGGTCGGAGGGCTGAACAGACAAGCCGATGGC
GTCGAGTGGGATGGCGCAGGGACGACGACGACCAACACCAATACCAACAACAGCGAGTCGGCGTCGCAGCGGACG
AGGATCCAAGGCGGCATCCGCAAGGTGTATTCGACGACGACGAGCAGCGCGGCAAGCGATCGAGTACGAGCCGAG
GCCCGACGACTACGCGAGGAGAGCCGCCACGGGCGTCGCGACTTGAGAGACAGCGCCCTTAGCGAGAGCCTGCTG
GAGGAGAGCTCGTCGACGGTGGGGACCAAGAGCTACCACCACCCGATGCCGGAGCTGCGGGAGCGGGAGCGGCGT
CGGAGGGAGCGAGAGGAGCGGCGGGAGAGGCGTGGTGGTGGCTATAGGCGCGAAGAGGAAGGC
Transcript >Ophio5|3350
ATGGCCCCGGTCACCGGCGCCGGCACCCCAGGCTGGGACATGCTGTTCCCCCGGACCGAGGGCGCCGGGCTGTAC
GGGCGTGACGATGGAGACAAAAGCGGCGGAAACAAACCGGGCCACGGGGTACTAGACCCGCACGATATCAACAAC
GCTGGCTTCTTCGTGCTCTTCGCCCTCATCGGCTTGGGCCTCGTCATCACGGGTATCTGGTTCTTCTTCTGGGCA
CGCAACGGAGGAATGCACTTCAAGGCGACGGACTGGGACGACTACAAGTCAACGGTGCTGCGACGCAAGAGCGCC
AACGGGACGCTCCTATCGGGGGCGACGCCGTCGACGCAGCTCGGCGGCGGCAGCGTCTACAAGGACGTCGAGGAC
CAGGCGGCGACGGAGACGGTCAGTGGCATCACGGCGGGAGCCAGCGACGTGGTGGCGCGGGAGAAGCGAAAGCAG
AAGCAGAAGCGACGGGACGAGGAGAGGAAGAAGAAGAAGAAGAAGGAGGAAGAGGAGAAGACGAAAGAAAAGAAG
CAGGAAGGTGGCGACGGAGGACGGCGAGTGCGTGGCGAAGATGGTGTAGTGGAGGATGAGATGGCGGAGAAGGCG
GCCCAGAAGGAGCTTCGCAGCTATCGTCATGAGAAGCCGGCGCGGGTCGGAGGGCTGAACAGACAAGCCGATGGC
GTCGAGTGGGATGGCGCAGGGACGACGACGACCAACACCAATACCAACAACAGCGAGTCGGCGTCGCAGCGGACG
AGGATCCAAGGCGGCATCCGCAAGGTGTATTCGACGACGACGAGCAGCGCGGCAAGCGATCGAGTACGAGCCGAG
GCCCGACGACTACGCGAGGAGAGCCGCCACGGGCGTCGCGACTTGAGAGACAGCGCCCTTAGCGAGAGCCTGCTG
GAGGAGAGCTCGTCGACGGTGGGGACCAAGAGCTACCACCACCCGATGCCGGAGCTGCGGGAGCGGGAGCGGCGT
CGGAGGGAGCGAGAGGAGCGGCGGGAGAGGCGTGGTGGTGGCTATAGGCGCGAAGAGGAAGGCTGA
Gene >Ophio5|3350
ATGGCCCCGGTCACCGGCGCCGGCACCCCAGGCTGGGACATGCTGTTCCCCCGGACCGAGGGCGCCGGGCTGTAC
GGGCGTGACGATGGAGACAAAAGCGGCGGAAACAAACCGGGCCACGGGGTACTAGACCCGCACGATATCAACAAC
GCTGGCTTCTTCGTGCTCTTCGCCCTCATCGGCTTGGGCCTCGTCATCACGGGTATCTGGTTCTTCTTCTGGGCA
CGCAACGGAGGAATGCACTTCAAGGCGACGGACTGGGACGACTACAAGTCAACGGTGCTGCGACGCAAGAGCGCC
AACGGGACGCTCCTATCGGGGGCGACGCCGTCGACGCAGCTCGGCGGCGGCAGCGTCTACAAGGACGTCGAGGAC
CAGGCGGCGACGGAGACGGTCAGTGGCATCACGGCGGGAGCCAGCGACGTGGTGGCGCGGGAGAAGCGAAAGCAG
AAGCAGAAGCGACGGGACGAGGAGAGGAAGAAGAAGAAGAAGAAGGAGGAAGAGGAGAAGACGAAAGAAAAGAAG
CAGGAAGGTGGCGACGGAGGACGGCGAGTGCGTGGCGAAGATGGTGTAGTGGAGGATGAGATGGCGGAGAAGGCG
GCCCAGAAGGAGCTTCGCAGCTATCGTCATGAGAAGCCGGCGCGGGTCGGAGGGCTGAACAGACAAGCCGATGGC
GTCGAGTGGGATGGCGCAGGGACGACGACGACCAACACCAATACCAACAACAGCGAGTCGGCGTCGCAGCGGACG
AGGATCCAAGGCGGCATCCGCAAGGTGTATTCGACGACGACGAGCAGCGCGGCAAGCGATCGAGTACGAGCCGAG
GCCCGACGACTACGCGAGGAGAGCCGCCACGGGCGTCGCGACTTGAGAGACAGCGCCCTTAGCGAGAGCCTGCTG
GAGGAGAGCTCGTCGACGGTGGGGACCAAGAGCTACCACCACCCGATGCCGGAGCTGCGGGAGCGGGAGCGGCGT
CGGAGGGAGCGAGAGGAGCGGCGGGAGAGGCGTGGTGGTGGCTATAGGCGCGAAGAGGAAGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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