Protein ID | Ophio5|3346 |
Gene name | |
Location | scaffold_265:21088..21967 |
Strand | + |
Gene length (bp) | 879 |
Transcript length (bp) | 879 |
Coding sequence length (bp) | 876 |
Protein length (aa) | 292 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF17784 | Sulfotransfer_4 | Sulfotransferase domain | 8.6E-64 | 15 | 242 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Mitochondrial transit peptide | 0.2084 | 0.113 | 0.2433 | 0.1066 | 0.8443 | 0.0977 | 0.4339 | 0.1421 | 0.2115 | 0.2969 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 260 | 282 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 85 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3346 MAQPIGVPDRVVPMRVIVVGAHRTGTMSMRSALWKLGFHDCYHMHSVMQHSEDHPDMWIRAMEAKFAGRGTFTRT DWDRLLGHCQACCDVPAAFFSAELAEVYPDAKVIVLNRDPNKWYESALNTVHKAIKETPMSTKLIRLYCYALDAQ TRSWMRFAKVMTTLCLTFDHGKEREKAIAWFEGQYKECHDRIPAERCLEYTIQDGWQPLCEHLGVPIPTVRDPRT GEFVEAPFPRINDRETFQLNMARNMKRSVARANKNAIMLFGRVAAVTIVAYGAYTMWKRNYGDDSYE |
Coding | >Ophio5|3346 ATGGCGCAACCCATCGGCGTCCCGGACCGTGTCGTCCCCATGCGCGTCATCGTCGTGGGCGCCCATCGCACGGGC ACCATGAGTATGAGATCCGCCCTCTGGAAGCTCGGCTTTCACGACTGCTACCACATGCACTCGGTCATGCAGCAT TCTGAAGATCATCCCGACATGTGGATTCGCGCTATGGAGGCCAAGTTCGCCGGCAGGGGAACCTTTACTAGGACC GACTGGGACCGCCTTCTCGGCCACTGCCAGGCCTGCTGCGACGTGCCTGCCGCCTTCTTCAGTGCTGAGCTGGCC GAGGTCTATCCGGACGCCAAGGTCATCGTCCTTAACCGTGACCCTAACAAGTGGTATGAGAGCGCGCTTAACACC GTCCACAAAGCCATCAAGGAAACACCCATGTCGACCAAGCTTATACGGCTATATTGCTACGCCTTGGATGCGCAA ACGCGCAGCTGGATGCGCTTCGCCAAGGTCATGACCACTCTCTGCCTCACCTTCGACCACGGCAAGGAAAGGGAA AAGGCCATCGCTTGGTTCGAGGGCCAGTACAAGGAATGTCACGACCGTATCCCGGCAGAGCGATGCCTCGAGTAC ACCATTCAGGACGGCTGGCAGCCGCTCTGCGAACATCTGGGCGTACCGATACCCACCGTGAGGGACCCGAGGACG GGCGAGTTCGTCGAGGCCCCGTTCCCTCGCATTAACGATCGCGAGACCTTCCAGCTCAACATGGCTCGCAACATG AAGCGTTCGGTAGCGCGCGCTAATAAGAACGCTATAATGCTTTTTGGCAGGGTGGCTGCGGTGACCATTGTGGCA TATGGTGCTTACACAATGTGGAAGAGGAACTATGGGGACGACTCCTACGAG |
Transcript | >Ophio5|3346 ATGGCGCAACCCATCGGCGTCCCGGACCGTGTCGTCCCCATGCGCGTCATCGTCGTGGGCGCCCATCGCACGGGC ACCATGAGTATGAGATCCGCCCTCTGGAAGCTCGGCTTTCACGACTGCTACCACATGCACTCGGTCATGCAGCAT TCTGAAGATCATCCCGACATGTGGATTCGCGCTATGGAGGCCAAGTTCGCCGGCAGGGGAACCTTTACTAGGACC GACTGGGACCGCCTTCTCGGCCACTGCCAGGCCTGCTGCGACGTGCCTGCCGCCTTCTTCAGTGCTGAGCTGGCC GAGGTCTATCCGGACGCCAAGGTCATCGTCCTTAACCGTGACCCTAACAAGTGGTATGAGAGCGCGCTTAACACC GTCCACAAAGCCATCAAGGAAACACCCATGTCGACCAAGCTTATACGGCTATATTGCTACGCCTTGGATGCGCAA ACGCGCAGCTGGATGCGCTTCGCCAAGGTCATGACCACTCTCTGCCTCACCTTCGACCACGGCAAGGAAAGGGAA AAGGCCATCGCTTGGTTCGAGGGCCAGTACAAGGAATGTCACGACCGTATCCCGGCAGAGCGATGCCTCGAGTAC ACCATTCAGGACGGCTGGCAGCCGCTCTGCGAACATCTGGGCGTACCGATACCCACCGTGAGGGACCCGAGGACG GGCGAGTTCGTCGAGGCCCCGTTCCCTCGCATTAACGATCGCGAGACCTTCCAGCTCAACATGGCTCGCAACATG AAGCGTTCGGTAGCGCGCGCTAATAAGAACGCTATAATGCTTTTTGGCAGGGTGGCTGCGGTGACCATTGTGGCA TATGGTGCTTACACAATGTGGAAGAGGAACTATGGGGACGACTCCTACGAGTAA |
Gene | >Ophio5|3346 ATGGCGCAACCCATCGGCGTCCCGGACCGTGTCGTCCCCATGCGCGTCATCGTCGTGGGCGCCCATCGCACGGGC ACCATGAGTATGAGATCCGCCCTCTGGAAGCTCGGCTTTCACGACTGCTACCACATGCACTCGGTCATGCAGCAT TCTGAAGATCATCCCGACATGTGGATTCGCGCTATGGAGGCCAAGTTCGCCGGCAGGGGAACCTTTACTAGGACC GACTGGGACCGCCTTCTCGGCCACTGCCAGGCCTGCTGCGACGTGCCTGCCGCCTTCTTCAGTGCTGAGCTGGCC GAGGTCTATCCGGACGCCAAGGTCATCGTCCTTAACCGTGACCCTAACAAGTGGTATGAGAGCGCGCTTAACACC GTCCACAAAGCCATCAAGGAAACACCCATGTCGACCAAGCTTATACGGCTATATTGCTACGCCTTGGATGCGCAA ACGCGCAGCTGGATGCGCTTCGCCAAGGTCATGACCACTCTCTGCCTCACCTTCGACCACGGCAAGGAAAGGGAA AAGGCCATCGCTTGGTTCGAGGGCCAGTACAAGGAATGTCACGACCGTATCCCGGCAGAGCGATGCCTCGAGTAC ACCATTCAGGACGGCTGGCAGCCGCTCTGCGAACATCTGGGCGTACCGATACCCACCGTGAGGGACCCGAGGACG GGCGAGTTCGTCGAGGCCCCGTTCCCTCGCATTAACGATCGCGAGACCTTCCAGCTCAACATGGCTCGCAACATG AAGCGTTCGGTAGCGCGCGCTAATAAGAACGCTATAATGCTTTTTGGCAGGGTGGCTGCGGTGACCATTGTGGCA TATGGTGCTTACACAATGTGGAAGAGGAACTATGGGGACGACTCCTACGAGTAA |