Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|3329
Gene name
Location	scaffold_263:23708..25420
Strand	+
Gene length (bp)	1712
Transcript length (bp)	1518
Coding sequence length (bp)	1515
Protein length (aa)	505

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05602	CLPTM1	Cleft lip and palate transmembrane protein 1 (CLPTM1)	2.1E-140	36	495

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q2NL17\|CLPT1_BOVIN	Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus GN=CLPTM1 PE=2 SV=1	103	495	3.0E-44
sp\|O96005\|CLPT1_HUMAN	Cleft lip and palate transmembrane protein 1 OS=Homo sapiens GN=CLPTM1 PE=1 SV=1	157	495	4.0E-44
sp\|Q6DEL2\|CLPT1_DANRE	Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio GN=clptm1 PE=2 SV=1	103	495	4.0E-43
sp\|Q8VBZ3\|CLPT1_MOUSE	Cleft lip and palate transmembrane protein 1 homolog OS=Mus musculus GN=Clptm1 PE=1 SV=1	157	495	3.0E-42
sp\|Q54RJ1\|CNRB_DICDI	CLPTM1-like membrane protein cnrB OS=Dictyostelium discoideum GN=cnrB PE=3 SV=1	95	495	9.0E-40

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q2NL17\|CLPT1_BOVIN	Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus GN=CLPTM1 PE=2 SV=1	103	495	3.0E-44
sp\|O96005\|CLPT1_HUMAN	Cleft lip and palate transmembrane protein 1 OS=Homo sapiens GN=CLPTM1 PE=1 SV=1	157	495	4.0E-44
sp\|Q6DEL2\|CLPT1_DANRE	Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio GN=clptm1 PE=2 SV=1	103	495	4.0E-43
sp\|Q8VBZ3\|CLPT1_MOUSE	Cleft lip and palate transmembrane protein 1 homolog OS=Mus musculus GN=Clptm1 PE=1 SV=1	157	495	3.0E-42
sp\|Q54RJ1\|CNRB_DICDI	CLPTM1-like membrane protein cnrB OS=Dictyostelium discoideum GN=cnrB PE=3 SV=1	95	495	9.0E-40
sp\|Q5R7B1\|CLP1L_PONAB	Cleft lip and palate transmembrane protein 1-like protein OS=Pongo abelii GN=CLPTM1L PE=2 SV=1	133	495	2.0E-31
sp\|Q96KA5\|CLP1L_HUMAN	Cleft lip and palate transmembrane protein 1-like protein OS=Homo sapiens GN=CLPTM1L PE=1 SV=1	133	495	2.0E-31
sp\|Q8BXA5\|CLP1L_MOUSE	Cleft lip and palate transmembrane protein 1-like protein OS=Mus musculus GN=Clptm1l PE=1 SV=1	133	495	2.0E-29
sp\|Q5ZKJ0\|CLP1L_CHICK	Cleft lip and palate transmembrane protein 1-like protein OS=Gallus gallus GN=CLPTM1L PE=2 SV=1	133	495	4.0E-29
sp\|A2VE61\|CLP1L_BOVIN	Cleft lip and palate transmembrane protein 1-like protein OS=Bos taurus GN=CLPTM1L PE=2 SV=1	133	495	3.0E-26
sp\|Q6DHU1\|CLP1L_DANRE	Cleft lip and palate transmembrane protein 1-like protein OS=Danio rerio GN=clptm1l PE=2 SV=1	133	495	4.0E-26

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GO

GO Term	Description	Terminal node
GO:0016021	integral component of membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No
GO:0031224	intrinsic component of membrane	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 28	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	27	49	22
2	367	389	22
3	402	424	22
4	429	446	17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|3329 MASSVGQKQMEPQPVPPQQEQQRRGGFNLNRLVLGIAIYLGFNLLLPFVMRKDQRSETVTDPETGRSVVVASNME GIPPFQLRPKTLDEGKQYRSIPRKIAPIWPQDSMVDIVVTLSPSFNPTPIAQTPAEYVVLREKSFHMDNKSDVRS IDTTFTVPKAVQNNGTLWGHFYIGLADSQLDPREPGFDSDKAYHFAHPLTQYLAKKKVAKTRNLLDARTEEEPGE PEPTGPVVTSHYHANASFAFVPAMGVKDFSQLHPAIRQFLRLEATGARDGSGENGWYYPLLFVNTFWQLTNHMTV LNDTVKELPLHIDVKNMAFWQFQMLASIEMNSKENARQAAFGASLPGGGDGTEIEMVKEIFIDTNPILLAITAVV TVAHLLLETLAFGSDIAHYRKKKDNVGISVRSILANVVMQAIIFLYLLDNSQNTSWMILGTQGVGILIELWKMTT VVNVRLRPAAPGSLVPWRLVMEDKHKLTETEAKTKEYDEVAFRYIRGTRSSSRRW
Coding	>Ophio5\|3329 ATGGCGTCTTCAGTCGGCCAAAAGCAAATGGAGCCGCAGCCGGTTCCTCCTCAGCAGGAGCAGCAGCGGAGAGGT GGCTTCAACCTCAACCGACTGGTGCTCGGCATCGCCATCTACCTCGGCTTCAACCTCTTACTGCCGTTCGTTATG CGCAAGGATCAGCGCTCCGAGACCGTGACAGATCCGGAGACGGGCCGTTCCGTTGTCGTGGCGAGCAACATGGAG GGCATTCCACCCTTTCAGTTGCGGCCCAAGACTCTCGACGAGGGCAAGCAGTATCGGTCGATTCCGCGCAAGATT GCGCCCATCTGGCCGCAGGATAGCATGGTTGATATCGTCGTGACACTTTCGCCGTCATTCAATCCGACGCCCATC GCGCAGACGCCGGCCGAGTACGTCGTGCTGCGGGAGAAGAGCTTCCACATGGATAACAAGTCGGACGTGCGCTCC ATTGATACCACATTTACTGTACCCAAAGCCGTACAGAACAACGGGACGCTCTGGGGACACTTTTACATCGGCCTT GCCGATAGCCAGCTCGACCCCCGCGAGCCTGGCTTCGACTCGGACAAGGCCTATCATTTTGCCCATCCCCTGACC CAGTACCTTGCCAAGAAGAAGGTGGCCAAGACGCGCAATCTGCTGGACGCCCGGACGGAGGAGGAGCCGGGGGAG CCGGAGCCGACTGGGCCAGTCGTTACCAGCCACTACCATGCCAATGCCAGCTTCGCCTTTGTCCCGGCCATGGGC GTCAAGGATTTTTCACAGCTGCATCCGGCTATCCGCCAGTTTTTGCGGCTGGAGGCGACGGGCGCCCGGGACGGG AGTGGTGAAAATGGATGGTACTACCCGCTCCTGTTCGTCAACACGTTTTGGCAACTCACCAATCACATGACGGTT CTCAACGACACGGTCAAAGAGCTCCCGCTGCATATCGACGTCAAGAACATGGCCTTTTGGCAGTTCCAGATGCTG GCGTCCATCGAGATGAACTCCAAGGAGAACGCGCGACAGGCTGCCTTTGGCGCCTCGTTGCCCGGCGGCGGAGAC GGCACCGAGATCGAAATGGTCAAGGAAATCTTTATCGACACGAATCCGATCCTGCTGGCCATCACGGCAGTGGTG ACGGTGGCGCACCTGCTCCTGGAGACGCTGGCCTTTGGGTCCGACATCGCTCATTACCGCAAGAAGAAGGATAAT GTCGGCATCTCGGTGCGGTCGATCCTGGCCAACGTGGTGATGCAGGCCATCATCTTTCTCTACCTGCTCGACAAC TCGCAGAACACTAGCTGGATGATTCTCGGCACGCAGGGCGTCGGCATCCTCATCGAGCTGTGGAAGATGACGACG GTGGTCAACGTGCGCTTGCGGCCGGCCGCTCCCGGCTCACTCGTCCCTTGGCGGTTGGTCATGGAAGACAAGCAC AAGCTGACAGAGACGGAGGCCAAGACTAAAGAGTACGACGAGGTCGCGTTCCGGTACATTCGTGGTACTCGTTCG TCATCACGACGCTGG
Transcript	>Ophio5\|3329 ATGGCGTCTTCAGTCGGCCAAAAGCAAATGGAGCCGCAGCCGGTTCCTCCTCAGCAGGAGCAGCAGCGGAGAGGT GGCTTCAACCTCAACCGACTGGTGCTCGGCATCGCCATCTACCTCGGCTTCAACCTCTTACTGCCGTTCGTTATG CGCAAGGATCAGCGCTCCGAGACCGTGACAGATCCGGAGACGGGCCGTTCCGTTGTCGTGGCGAGCAACATGGAG GGCATTCCACCCTTTCAGTTGCGGCCCAAGACTCTCGACGAGGGCAAGCAGTATCGGTCGATTCCGCGCAAGATT GCGCCCATCTGGCCGCAGGATAGCATGGTTGATATCGTCGTGACACTTTCGCCGTCATTCAATCCGACGCCCATC GCGCAGACGCCGGCCGAGTACGTCGTGCTGCGGGAGAAGAGCTTCCACATGGATAACAAGTCGGACGTGCGCTCC ATTGATACCACATTTACTGTACCCAAAGCCGTACAGAACAACGGGACGCTCTGGGGACACTTTTACATCGGCCTT GCCGATAGCCAGCTCGACCCCCGCGAGCCTGGCTTCGACTCGGACAAGGCCTATCATTTTGCCCATCCCCTGACC CAGTACCTTGCCAAGAAGAAGGTGGCCAAGACGCGCAATCTGCTGGACGCCCGGACGGAGGAGGAGCCGGGGGAG CCGGAGCCGACTGGGCCAGTCGTTACCAGCCACTACCATGCCAATGCCAGCTTCGCCTTTGTCCCGGCCATGGGC GTCAAGGATTTTTCACAGCTGCATCCGGCTATCCGCCAGTTTTTGCGGCTGGAGGCGACGGGCGCCCGGGACGGG AGTGGTGAAAATGGATGGTACTACCCGCTCCTGTTCGTCAACACGTTTTGGCAACTCACCAATCACATGACGGTT CTCAACGACACGGTCAAAGAGCTCCCGCTGCATATCGACGTCAAGAACATGGCCTTTTGGCAGTTCCAGATGCTG GCGTCCATCGAGATGAACTCCAAGGAGAACGCGCGACAGGCTGCCTTTGGCGCCTCGTTGCCCGGCGGCGGAGAC GGCACCGAGATCGAAATGGTCAAGGAAATCTTTATCGACACGAATCCGATCCTGCTGGCCATCACGGCAGTGGTG ACGGTGGCGCACCTGCTCCTGGAGACGCTGGCCTTTGGGTCCGACATCGCTCATTACCGCAAGAAGAAGGATAAT GTCGGCATCTCGGTGCGGTCGATCCTGGCCAACGTGGTGATGCAGGCCATCATCTTTCTCTACCTGCTCGACAAC TCGCAGAACACTAGCTGGATGATTCTCGGCACGCAGGGCGTCGGCATCCTCATCGAGCTGTGGAAGATGACGACG GTGGTCAACGTGCGCTTGCGGCCGGCCGCTCCCGGCTCACTCGTCCCTTGGCGGTTGGTCATGGAAGACAAGCAC AAGCTGACAGAGACGGAGGCCAAGACTAAAGAGTACGACGAGGTCGCGTTCCGGTACATTCGTGGTACTCGTTCG TCATCACGACGCTGGTAG
Gene	>Ophio5\|3329 ATGGCGTCTTCAGTCGGCCAAAAGCAAATGGAGCCGCAGCCGGTTCCTCCTCAGCAGGAGCAGCAGCGGAGAGGT GTGAGTGTTTCAAAACCTCTATTGAGCGTCCCCCCCTCTTCATATCTCTAATGGGTCGGTCGTTCAGGGCTTCAA CCTCAACCGACTGGTGCTCGGCATCGCCATCTACCTCGGCTTCAACCTCTTACTGCCGTTCGTTATGCGCAAGGA TCAGCGCTCCGAGACCGTGACAGATCCGGAGACGGGCCGTTCCGTTGTCGTGGCGAGCAACATGGAGGGCATTCC ACCCTTTCAGTTGCGGCCCAAGACTCTCGACGAGGGCAAGCAGTATCGGTCGATTCCGCGCAAGATTGCGCCCAT CTGGCCGCAGGATAGCATGGTTGATATCGTCGTGACACTTTCGCCGTCATTCAATCCGACGCCCATCGCGCAGAC GCCGGCCGAGTACGTCGTGCTGCGGGAGAAGAGCTTCCACATGGATAACAAGTCGGACGTGCGCTCCATTGATAC CACATTTACTGTACCCAAAGCCGTACAGAACAACGGGACGCTCTGGGGACACTTTTACATCGGCCTTGCCGATAG CCAGCTCGACCCCCGCGAGCCTGGCTTCGACTCGGACAAGGCCTATCATTTTGCCCATCCCCTGACCCAGTACCT TGCCAAGAAGAAGGTGGCCAAGACGCGCAATCTGCTGGACGCCCGGACGGAGGAGGAGCCGGGGGAGCCGGAGCC GACTGGGCCAGTCGTTACCAGCCACTACCATGCCAATGCCAGCTTCGCCTTTGTCCCGGCCATGGGCGTCAAGGA TTTTTCACAGCTGCATCCGGCTATCCGCCAGTTTTTGCGGCTGGAGGCGACGGGCGCCCGGGACGGGAGTGGTGA AAATGGATGGTACTGTACGTTGCTAAAAACCCCGGTTCTCGTCTTTGCCTCGCTGACCTTGGCGGCTGCCTTAGA CCCGCTCCTGTTCGTCAACACGTTTTGGCAACTCACCAATCACATGACGGTTCTCAACGACACGGTCAAAGAGCT CCCGCTGCATATCGACGTCAAGAACATGGCCTTTTGGCAGTTCCAGATGCTGGCGTCCATCGAGATGAACTCCAA GGAGAACGCGCGACAGGCTGCCTTTGGCGCCTCGTTGCCCGGCGGCGGAGACGGCACCGAGATCGAAATGGTCAA GGAAATCTTTATCGACACGAATCCGATCCTGCTGGCCATCACGGCAGTGGTGACGGTGGCGCACCTGCTCCTGGA GACGCTGGCCTTTGGGTCCGACATCGCTCATTACCGCAAGAAGAAGGATAATGTCGGCATCTCGGTGCGGTCGAT CCTGGCCAACGTGGTGATGCAGGCCATCATCTTTCTCTACCTGCTCGACAACTCGCAGAACACTAGCTGGATGAT TCTCGGCACGCAGGGCGTCGGCATCCTCATCGAGCTGTGGAAGATGACGACGGTGGTCAACGTGCGCTTGCGGCC GGCCGCTCCCGGCTCACTCGTCCCTTGGCGGTTGGTCATGGAAGACAAGCACAAGCTGACAGAGACGGAGGCCAA GACTAAAGAGTACGACGAGGTCGCGTTCCGGTACATGTACGTGGTGGCGGTGCCGTTACTGGTTGCGTACGGCGT GTACTCACTCGTGTACGAGACGCATAAGTCGTGGTACTCGTTCGTCATCACGACGCTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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