Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|3321
Gene name
Location	scaffold_262:24662..26446
Strand	+
Gene length (bp)	1784
Transcript length (bp)	1659
Coding sequence length (bp)	1656
Protein length (aa)	552

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06101	Vps62	Vacuolar protein sorting-associated protein 62	7.2E-10	314	377

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P53285\|VPS62_YEAST	Vacuolar protein sorting-associated protein 62 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS62 PE=1 SV=1	121	450	4.0E-39
sp\|Q06466\|TDA6_YEAST	Putative vacuolar protein sorting-associated protein TDA6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TDA6 PE=2 SV=1	269	450	6.0E-39
sp\|Q06466\|TDA6_YEAST	Putative vacuolar protein sorting-associated protein TDA6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TDA6 PE=2 SV=1	106	198	4.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 38	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22
2	505	536	31

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|3321 MVGLKRWLRRCLVLLTLLATFCFLAWFLPRALNPTETSPEKRLEDRLWIDTSPYFLDRQACRWLSLCGLHHLRAD PAVGPDEGAVLVDYDEQEWRELRRRTVNNDDDKRSRRTVRRRIVKDVPSFVTRYAPYVHLYSGEQFWPSDIGQHL RHMNATDHHGNPLHDGLDSITLDRLDHLGGRHVTLHSRDDVETRPAWLYSRDNMPEGRGDDDDDNNHHHHQHPVP PLEHTTWFDADRTHPPHRLARPPVRSQRSRPKTPTPPVDLYRRGHKPDQDGYSGAPAILVVVDKGAGILDAFWFF FYSYNLGQTVLGLRFGNHVGDWEHCMVRFQHGIPRGLYLSEHEGGQAYAWSAVEKTADGRPVVYSALGSHAMYAL AGDHPYVLPLGLLKDVTDKGPRWDPAKNMLAYHYDYVRPDDGLAPAAANPDAPTSWFHFRGRWGDAVYALADARQ WRLFDEEEEDEEEEDEEDEEEEEDDDDECQSEEEEETGRKRRLGRLSEMGTRPSLTLAIIIFIFILILILILVLI IIFTIIIIIIAHAHTHTIHPSASQLAS
Coding	>Ophio5\|3321 ATGGTGGGCCTCAAGCGCTGGCTGCGGCGCTGTCTCGTGCTGCTGACGTTGCTGGCAACCTTTTGCTTCCTGGCC TGGTTCCTACCTCGGGCTCTGAACCCTACGGAGACGAGTCCGGAGAAGCGGTTAGAGGACAGGTTGTGGATAGAC ACGAGTCCTTATTTCTTGGATCGTCAGGCCTGTCGATGGCTTAGCCTTTGCGGCTTGCATCATTTGCGCGCTGAT CCGGCTGTTGGACCGGATGAGGGAGCCGTGTTGGTTGACTATGACGAGCAAGAGTGGCGGGAGTTGCGCCGCCGG ACGGTCAATAATGACGACGACAAGAGGAGTAGGAGGACAGTCAGGAGACGTATCGTCAAGGACGTGCCGAGTTTC GTCACCCGCTACGCACCATACGTTCATCTCTACTCGGGCGAGCAGTTCTGGCCTTCGGATATTGGCCAGCACCTT CGCCATATGAACGCCACCGACCATCATGGCAACCCGCTCCATGACGGTCTCGATAGCATCACGCTCGATAGACTT GACCACCTCGGCGGACGCCACGTCACCCTCCACAGCCGCGACGACGTCGAGACCCGGCCCGCGTGGCTGTACAGC CGCGATAACATGCCGGAAGGTCGTGGTGACGACGACGACGACAACAATCATCATCATCATCAACACCCCGTCCCG CCCCTCGAACACACAACCTGGTTCGACGCGGACAGGACTCATCCCCCGCACCGCCTCGCCCGTCCGCCCGTCCGC AGCCAACGATCGCGACCCAAGACGCCCACCCCTCCCGTCGACCTCTATCGCCGCGGCCACAAACCCGACCAAGAC GGCTACTCGGGCGCGCCCGCCATCCTCGTCGTCGTCGACAAGGGCGCCGGCATCCTCGACGCCTTCTGGTTCTTC TTCTACTCGTACAACCTGGGCCAGACGGTTCTCGGCCTCCGGTTCGGCAACCACGTCGGCGACTGGGAGCACTGC ATGGTTCGCTTCCAGCACGGCATCCCCCGCGGCTTGTACCTCTCGGAGCACGAGGGAGGTCAGGCCTACGCCTGG TCGGCCGTGGAGAAGACGGCAGACGGTCGGCCCGTCGTCTACTCCGCCCTCGGTTCCCACGCCATGTACGCCCTC GCCGGAGACCATCCTTACGTCCTGCCGCTGGGCCTCCTCAAGGACGTGACGGACAAGGGGCCCCGGTGGGACCCG GCCAAGAACATGCTCGCCTACCATTACGACTACGTCCGTCCCGACGACGGCCTGGCCCCGGCCGCCGCGAACCCG GACGCGCCCACGAGCTGGTTCCACTTCCGAGGCCGTTGGGGCGACGCCGTCTACGCCCTCGCCGACGCTCGCCAG TGGCGCCTCTTTGACGAGGAGGAGGAGGACGAGGAGGAGGAGGATGAAGAAGATGAAGAAGAAGAAGAAGATGAT GATGATGAATGTCAATCTGAAGAGGAGGAAGAGACGGGGCGTAAGAGGAGGTTGGGTAGACTATCTGAAATGGGA ACAAGGCCCAGTCTCACACTTGCCATCATCATCTTCATCTTCATCCTCATCCTCATCCTCATCCTCGTCCTCATC ATCATCTTCACCATCATCATCATCATCATCGCACATGCACACACGCACACCATTCACCCATCAGCTAGCCAGCTA GCCAGC
Transcript	>Ophio5\|3321 ATGGTGGGCCTCAAGCGCTGGCTGCGGCGCTGTCTCGTGCTGCTGACGTTGCTGGCAACCTTTTGCTTCCTGGCC TGGTTCCTACCTCGGGCTCTGAACCCTACGGAGACGAGTCCGGAGAAGCGGTTAGAGGACAGGTTGTGGATAGAC ACGAGTCCTTATTTCTTGGATCGTCAGGCCTGTCGATGGCTTAGCCTTTGCGGCTTGCATCATTTGCGCGCTGAT CCGGCTGTTGGACCGGATGAGGGAGCCGTGTTGGTTGACTATGACGAGCAAGAGTGGCGGGAGTTGCGCCGCCGG ACGGTCAATAATGACGACGACAAGAGGAGTAGGAGGACAGTCAGGAGACGTATCGTCAAGGACGTGCCGAGTTTC GTCACCCGCTACGCACCATACGTTCATCTCTACTCGGGCGAGCAGTTCTGGCCTTCGGATATTGGCCAGCACCTT CGCCATATGAACGCCACCGACCATCATGGCAACCCGCTCCATGACGGTCTCGATAGCATCACGCTCGATAGACTT GACCACCTCGGCGGACGCCACGTCACCCTCCACAGCCGCGACGACGTCGAGACCCGGCCCGCGTGGCTGTACAGC CGCGATAACATGCCGGAAGGTCGTGGTGACGACGACGACGACAACAATCATCATCATCATCAACACCCCGTCCCG CCCCTCGAACACACAACCTGGTTCGACGCGGACAGGACTCATCCCCCGCACCGCCTCGCCCGTCCGCCCGTCCGC AGCCAACGATCGCGACCCAAGACGCCCACCCCTCCCGTCGACCTCTATCGCCGCGGCCACAAACCCGACCAAGAC GGCTACTCGGGCGCGCCCGCCATCCTCGTCGTCGTCGACAAGGGCGCCGGCATCCTCGACGCCTTCTGGTTCTTC TTCTACTCGTACAACCTGGGCCAGACGGTTCTCGGCCTCCGGTTCGGCAACCACGTCGGCGACTGGGAGCACTGC ATGGTTCGCTTCCAGCACGGCATCCCCCGCGGCTTGTACCTCTCGGAGCACGAGGGAGGTCAGGCCTACGCCTGG TCGGCCGTGGAGAAGACGGCAGACGGTCGGCCCGTCGTCTACTCCGCCCTCGGTTCCCACGCCATGTACGCCCTC GCCGGAGACCATCCTTACGTCCTGCCGCTGGGCCTCCTCAAGGACGTGACGGACAAGGGGCCCCGGTGGGACCCG GCCAAGAACATGCTCGCCTACCATTACGACTACGTCCGTCCCGACGACGGCCTGGCCCCGGCCGCCGCGAACCCG GACGCGCCCACGAGCTGGTTCCACTTCCGAGGCCGTTGGGGCGACGCCGTCTACGCCCTCGCCGACGCTCGCCAG TGGCGCCTCTTTGACGAGGAGGAGGAGGACGAGGAGGAGGAGGATGAAGAAGATGAAGAAGAAGAAGAAGATGAT GATGATGAATGTCAATCTGAAGAGGAGGAAGAGACGGGGCGTAAGAGGAGGTTGGGTAGACTATCTGAAATGGGA ACAAGGCCCAGTCTCACACTTGCCATCATCATCTTCATCTTCATCCTCATCCTCATCCTCATCCTCGTCCTCATC ATCATCTTCACCATCATCATCATCATCATCGCACATGCACACACGCACACCATTCACCCATCAGCTAGCCAGCTA GCCAGCTAG
Gene	>Ophio5\|3321 ATGGTGGGCCTCAAGCGCTGGCTGCGGCGCTGTCTCGTGCTGCTGACGTTGCTGGCAACCTTTTGCTTCCTGGCC TGGTTCCTACCTCGGGCTCTGAACCCTACGGAGACGAGTCCGGAGAAGCGGTTAGAGGACAGGTTGTGGATAGAC ACGAGTCCTTATTTCTTGGATCGTCAGGCCTGTCGATGGCTTAGCCTTTGCGGCTTGCATCATTTGCGCGCTGAT CCGGCTGTTGGACCGGATGAGGGAGCCGTGTTGGTTGACTATGACGAGCAAGAGTGGCGGGAGTTGCGCCGCCGG ACGGTCAATAATGACGACGACAAGAGGAGTAGGAGGACAGTCAGGAGACGTATCGTCAAGGACGTGCCGAGTTTC GTCACCCGCTACGCACCATACGTTCATCTCTACTCGGGCGAGCAGTTCTGGCCTTCGGATATTGGCCAGCACCTT CGCCATATGAACGCCACCGACCATCATGGCAACCCGCTCCATGACGGTCTCGATAGCATCACGCTCGATAGACTT GACCACCTCGGCGGACGCCACGTCACCCTCCACAGCCGCGACGACGTCGAGACCCGGCCCGCGTGGCTGTACAGC CGCGATAACATGCCGGAAGGTCGTGGTGACGACGACGACGACAACAATCATCATCATCATCAACACCCCGTCCCG CCCCTCGAACACACAACCTGGTTCGACGCGGACAGGACTCATCCCCCGCACCGCCTCGCCCGTCCGCCCGTCCGC AGCCAACGATCGCGACCCAAGACGCCCACCCCTCCCGTCGACCTCTATCGCCGCGGCCACAAACCCGACCAAGAC GGCTACTCGGGCGCGCCCGCCATCCTCGTCGTCGTCGACAAGGGCGCCGGCATCCTCGACGCCTTCTGGTTCTTC TTCTACTCGTACAACCTGGGCCAGACGGTTCTCGGCCTCCGGTTCGGCAACCACGTCGGCGACTGGGAGCACTGC ATGGTTCGCTTCCAGCACGGCATCCCCCGCGGCTTGTACCTCTCGGAGCACGAGGGAGGTCAGGCCTACGCCTGG TCGGCCGTGGAGAAGACGGCAGACGGTCGGCCCGTCGTCTACTCCGCCCTCGGTTCCCACGCCATGTACGCCCTC GCCGGAGACCATCCTTACGTCCTGCCGCTGGGCCTCCTCAAGGACGTGACGGACAAGGGGCCCCGGTGGGACCCG GCCAAGAACATGCTCGCCTACCATTACGACTACGTCCGTCCCGACGACGGCCTGGCCCCGGCCGCCGCGAACCCG GACGCGCCCACGAGCTGGTTCCACTTCCGAGGCCGTTGGGGCGACGCCGTCTACGCCCTCGCCGACGCTCGCCAG TGGCGCCTCTTTGGTCAGTATCATTACGTGACGGGTCCCGCCGGGCCCAAGTTTAAGCATCTCGATCGGTCCAAG TTGTGTGCCGGCGTCAGGTGTCGTCTTTTGTACGAGTTGGATCCCAAGGGGACGTGGTACTAGACGAGGAGGAGG AGGACGAGGAGGAGGAGGATGAAGAAGATGAAGAAGAAGAAGAAGATGATGATGATGAATGTCAATCTGAAGAGG AGGAAGAGACGGGGCGTAAGAGGAGGTTGGGTAGACTATCTGAAATGGGAACAAGGCCCAGTCTCACACTTGCCA TCATCATCTTCATCTTCATCCTCATCCTCATCCTCATCCTCGTCCTCATCATCATCTTCACCATCATCATCATCA TCATCGCACATGCACACACGCACACCATTCACCCATCAGCTAGCCAGCTAGCCAGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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