Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3318
Gene name
Locationscaffold_262:18786..19699
Strand+
Gene length (bp)913
Transcript length (bp)771
Coding sequence length (bp)768
Protein length (aa) 256

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02100 ODC_AZ Ornithine decarboxylase antizyme 1.9E-43 143 256

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0008073 ornithine decarboxylase inhibitor activity Yes
GO:0004857 enzyme inhibitor activity No
GO:0003674 molecular_function No
GO:0042979 ornithine decarboxylase regulator activity No
GO:0030234 enzyme regulator activity No
GO:0098772 molecular function regulator activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3318
MSLPRATSSTLLPASKASTTALRGSQGRSGIPEVPTSGLPSPPTSPPLAALTSSNKLALLPKHKKRDIPGRRLER
RGGAALVIREECERFFCESMKTVFRGERDLSMYGSSLSGAFVQTPPPEDRIATALKNGSDVQRAAVEVDAWMEVW
DYAGGASFRAFVVDDGEDKSLFVFFDIQGVMGRDLKRALMALIELADGPLECGRIMTCIDRRMPAQEALELTRSL
QWVGFEMATLDHWAGDMDVTSPDWVLMGMEL
Coding >Ophio5|3318
ATGTCCTTGCCTCGTGCTACGTCGTCGACTCTGCTGCCAGCCTCAAAGGCCTCCACTACTGCACTACGGGGGTCG
CAGGGGCGGAGTGGTATTCCTGAGGTCCCTACCTCAGGACTCCCATCCCCTCCGACAAGTCCCCCCCTCGCCGCG
CTGACCTCGTCCAACAAGCTCGCGCTTCTGCCCAAGCACAAGAAGCGCGACATTCCGGGCCGCCGCCTGGAGCGA
CGAGGGGGGGCAGCACTCGTGATCAGGGAAGAATGTGAGAGATTCTTTTGCGAGTCCATGAAGACCGTGTTCCGT
GGTGAGAGGGACCTGTCCATGTATGGCTCCAGCCTGTCCGGTGCTTTTGTGCAAACGCCGCCGCCAGAGGACCGC
ATTGCCACGGCGCTCAAAAACGGCTCCGACGTCCAGCGTGCCGCCGTCGAGGTTGACGCCTGGATGGAGGTCTGG
GACTATGCCGGCGGCGCCAGCTTCCGCGCCTTTGTCGTCGATGACGGGGAGGACAAATCCTTGTTTGTCTTTTTC
GACATTCAAGGCGTCATGGGCAGAGATCTCAAGAGAGCTCTCATGGCTCTCATCGAGCTCGCCGACGGACCCTTG
GAATGCGGCCGTATCATGACTTGCATCGACCGCCGCATGCCCGCCCAGGAGGCGCTGGAGCTGACGAGGAGCCTG
CAGTGGGTTGGCTTCGAAATGGCTACTCTGGATCACTGGGCGGGCGACATGGACGTCACCAGCCCTGACTGGGTG
CTCATGGGCATGGAACTT
Transcript >Ophio5|3318
ATGTCCTTGCCTCGTGCTACGTCGTCGACTCTGCTGCCAGCCTCAAAGGCCTCCACTACTGCACTACGGGGGTCG
CAGGGGCGGAGTGGTATTCCTGAGGTCCCTACCTCAGGACTCCCATCCCCTCCGACAAGTCCCCCCCTCGCCGCG
CTGACCTCGTCCAACAAGCTCGCGCTTCTGCCCAAGCACAAGAAGCGCGACATTCCGGGCCGCCGCCTGGAGCGA
CGAGGGGGGGCAGCACTCGTGATCAGGGAAGAATGTGAGAGATTCTTTTGCGAGTCCATGAAGACCGTGTTCCGT
GGTGAGAGGGACCTGTCCATGTATGGCTCCAGCCTGTCCGGTGCTTTTGTGCAAACGCCGCCGCCAGAGGACCGC
ATTGCCACGGCGCTCAAAAACGGCTCCGACGTCCAGCGTGCCGCCGTCGAGGTTGACGCCTGGATGGAGGTCTGG
GACTATGCCGGCGGCGCCAGCTTCCGCGCCTTTGTCGTCGATGACGGGGAGGACAAATCCTTGTTTGTCTTTTTC
GACATTCAAGGCGTCATGGGCAGAGATCTCAAGAGAGCTCTCATGGCTCTCATCGAGCTCGCCGACGGACCCTTG
GAATGCGGCCGTATCATGACTTGCATCGACCGCCGCATGCCCGCCCAGGAGGCGCTGGAGCTGACGAGGAGCCTG
CAGTGGGTTGGCTTCGAAATGGCTACTCTGGATCACTGGGCGGGCGACATGGACGTCACCAGCCCTGACTGGGTG
CTCATGGGCATGGAACTTTGA
Gene >Ophio5|3318
ATGTCCTTGCCTCGTGCTACGTCGTCGACTCTGCTGCCAGCCTCAAAGGCCTCCACTACTGCACTACGGGGGTCG
CAGGTCAGAGCCTCCCTTTTGCCCTCACTCCCCCTCTTCCCTTCGGGGAAGCCCATCCGAAGCTCGTCCCCTGCT
GACACTTATCCTCACAGGGGCGGAGTGGTATTCCTGAGGTCCCTACCTCAGGACTCCCATCCCCTCCGACAAGTC
CCCCCCTCGCCGCGCTGACCTCGTCCAACAAGCTCGCGCTTCTGCCCAAGCACAAGAAGCGCGACATTCCGGGCC
GCCGCCTGGAGCGACGAGGGGGGGCAGCACTCGTGATCAGGGAAGAATGTGAGAGATTCTTTTGCGAGTCCATGA
AGACCGTGTTCCGTGGTGAGAGGGACCTGTCCATGTATGGCTCCAGCCTGTCCGGTGCTTTTGTGCAAACGCCGC
CGCCAGAGGACCGCATTGCCACGGCGCTCAAAAACGGCTCCGACGTCCAGCGTGCCGCCGTCGAGGTTGACGCCT
GGATGGAGGTCTGGGACTATGCCGGCGGCGCCAGCTTCCGCGCCTTTGTCGTCGATGACGGGGAGGACAAATCCT
TGTTTGTCTTTTTCGACATTCAAGGCGTCATGGGCAGAGATCTCAAGAGAGCGTCAGTATTTGCCCGATCTTGTA
CGCCTCGGACTCGCCACTGACCCGCCACAGTCTCATGGCTCTCATCGAGCTCGCCGACGGACCCTTGGAATGCGG
CCGTATCATGACTTGCATCGACCGCCGCATGCCCGCCCAGGAGGCGCTGGAGCTGACGAGGAGCCTGCAGTGGGT
TGGCTTCGAAATGGCTACTCTGGATCACTGGGCGGGCGACATGGACGTCACCAGCCCTGACTGGGTGCTCATGGG
CATGGAACTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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