Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|3284
Gene name
Location	scaffold_26:58828..60253
Strand	-
Gene length (bp)	1425
Transcript length (bp)	1425
Coding sequence length (bp)	1422
Protein length (aa)	474

Overview

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Extracellular	Signal peptide	0.107	0.0958	0.936	0.116	0.1314	0.021	0.1254	0.1732	0.1506	0.0013

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 19	0.999679

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	11833.50	0.00	24880.50
CcL	In ants, during behavior modification	3.88	0.90	6.86
CcD	In ants, recently dead	3.33	0.69	5.97

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.000286	yes
SC16a	CcD	0.000286	yes
CcL	CcD	0.734878	no

Orthologs

Orthofinder run ID	4
Orthogroup	3817
Change Orthofinder run

Species	Protein ID
Ophiocordyceps australis 1348a (Ghana)	OphauG2\|1896
Ophiocordyceps australis map64 (Brazil)	OphauB2\|2011
Ophiocordyceps camponoti-floridani	Ophcf2\|03553
Ophiocordyceps camponoti-rufipedis	Ophun1\|3613
Ophiocordyceps kimflemingae	Ophio5\|3284 (this protein)
Ophiocordyceps subramaniannii	Hirsu2\|7488

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|3284 MYRISMAAGALVALQGAWAQQPSQTDVYPAEHTEEVKGYEGQYVDACSPVGTVRFNSTFPPCLSASRIEPSCALP WKEGLSDEQRQGDWKAERKCLCDGSFFDDAGDGCLKCKGAYRIDSEENLAVWKGIWDKVRGSYCQDETLTGNFSS YFKAASDQSSFQPVKDLGTKPAAGSIPIEAYYKNDKQGPGPLPGSTSSNSTAQDEAGPMEGVAQLTPDCRTMIGA IDTLPGGNSAKFSNSSSGAILVSVQATFNRICIINGDQREVKAERKEEPVVTPISQEVVPKEKAAEKADFDMTGC SCAQKVVPEGKQVVQSKESVEAWAMVSVMTGFAMVGGQLPQGCEGAQCGAQGGADAGASAGSEASSSASGNVYSV DSVMGTFGGSAGGSAPASGGKSAVKAPAFVVKPGVQVSAKAQCGADGSCGQSKGSYGQKTEGASDGKPQCADGSC GQPQGSAEGQTAPKSGNEDEIDYC
Coding	>Ophio5\|3284 ATGTATAGAATTTCGATGGCAGCCGGCGCCCTCGTGGCACTGCAGGGAGCCTGGGCCCAGCAGCCCTCTCAGACC GATGTCTATCCTGCCGAGCACACGGAAGAGGTCAAGGGTTACGAGGGACAATATGTGGATGCCTGCTCGCCGGTT GGCACCGTTCGATTCAACTCGACTTTCCCGCCTTGCCTGAGCGCTAGCAGGATCGAGCCCAGCTGTGCTCTTCCT TGGAAGGAGGGTCTGTCGGATGAGCAGCGTCAGGGAGATTGGAAGGCGGAGAGGAAGTGTCTCTGCGACGGTAGC TTCTTTGATGATGCTGGTGATGGGTGCCTCAAGTGCAAGGGGGCTTACCGTATCGACAGCGAGGAGAACCTTGCA GTCTGGAAGGGCATTTGGGACAAGGTCCGTGGCAGCTACTGCCAGGATGAGACCCTGACGGGTAACTTCTCGTCG TACTTCAAAGCAGCCTCAGACCAGTCTTCGTTCCAACCGGTCAAGGACCTTGGCACGAAGCCCGCAGCCGGAAGC ATCCCGATCGAGGCCTACTACAAGAACGACAAGCAGGGCCCGGGCCCTCTCCCCGGCTCTACGTCCTCCAACTCG ACCGCCCAGGACGAAGCCGGACCAATGGAGGGCGTCGCGCAGCTCACGCCCGACTGCCGCACCATGATTGGCGCC ATCGATACGCTTCCGGGCGGCAACAGTGCCAAGTTTTCCAACTCGAGCTCGGGGGCCATTCTCGTCTCTGTGCAG GCGACTTTCAACCGCATCTGCATCATCAACGGTGACCAGCGTGAAGTCAAGGCTGAGCGCAAGGAAGAGCCCGTT GTTACGCCCATTTCGCAGGAGGTCGTGCCCAAGGAAAAGGCTGCGGAGAAGGCTGATTTCGATATGACGGGTTGC TCGTGCGCTCAGAAGGTTGTTCCTGAGGGTAAGCAGGTTGTCCAGTCGAAGGAGTCCGTCGAGGCTTGGGCTATG GTCTCTGTCATGACTGGATTCGCCATGGTTGGTGGACAGCTGCCGCAGGGCTGTGAGGGTGCTCAGTGCGGCGCT CAGGGCGGTGCTGATGCCGGTGCTTCTGCTGGCAGTGAGGCATCATCTTCTGCCTCCGGCAACGTCTACTCCGTC GACTCCGTCATGGGCACCTTCGGCGGATCGGCTGGTGGTTCGGCCCCTGCCTCTGGCGGCAAGTCTGCCGTCAAG GCTCCGGCCTTTGTTGTGAAGCCTGGCGTCCAGGTCTCTGCCAAAGCCCAGTGTGGCGCTGACGGCTCTTGCGGA CAGTCAAAGGGCTCCTATGGCCAAAAGACTGAGGGCGCCTCTGACGGAAAGCCCCAGTGCGCCGACGGCTCTTGC GGACAGCCTCAGGGTTCTGCTGAGGGCCAGACGGCGCCGAAGTCGGGCAACGAGGATGAGATCGACTACTGC
Transcript	>Ophio5\|3284 ATGTATAGAATTTCGATGGCAGCCGGCGCCCTCGTGGCACTGCAGGGAGCCTGGGCCCAGCAGCCCTCTCAGACC GATGTCTATCCTGCCGAGCACACGGAAGAGGTCAAGGGTTACGAGGGACAATATGTGGATGCCTGCTCGCCGGTT GGCACCGTTCGATTCAACTCGACTTTCCCGCCTTGCCTGAGCGCTAGCAGGATCGAGCCCAGCTGTGCTCTTCCT TGGAAGGAGGGTCTGTCGGATGAGCAGCGTCAGGGAGATTGGAAGGCGGAGAGGAAGTGTCTCTGCGACGGTAGC TTCTTTGATGATGCTGGTGATGGGTGCCTCAAGTGCAAGGGGGCTTACCGTATCGACAGCGAGGAGAACCTTGCA GTCTGGAAGGGCATTTGGGACAAGGTCCGTGGCAGCTACTGCCAGGATGAGACCCTGACGGGTAACTTCTCGTCG TACTTCAAAGCAGCCTCAGACCAGTCTTCGTTCCAACCGGTCAAGGACCTTGGCACGAAGCCCGCAGCCGGAAGC ATCCCGATCGAGGCCTACTACAAGAACGACAAGCAGGGCCCGGGCCCTCTCCCCGGCTCTACGTCCTCCAACTCG ACCGCCCAGGACGAAGCCGGACCAATGGAGGGCGTCGCGCAGCTCACGCCCGACTGCCGCACCATGATTGGCGCC ATCGATACGCTTCCGGGCGGCAACAGTGCCAAGTTTTCCAACTCGAGCTCGGGGGCCATTCTCGTCTCTGTGCAG GCGACTTTCAACCGCATCTGCATCATCAACGGTGACCAGCGTGAAGTCAAGGCTGAGCGCAAGGAAGAGCCCGTT GTTACGCCCATTTCGCAGGAGGTCGTGCCCAAGGAAAAGGCTGCGGAGAAGGCTGATTTCGATATGACGGGTTGC TCGTGCGCTCAGAAGGTTGTTCCTGAGGGTAAGCAGGTTGTCCAGTCGAAGGAGTCCGTCGAGGCTTGGGCTATG GTCTCTGTCATGACTGGATTCGCCATGGTTGGTGGACAGCTGCCGCAGGGCTGTGAGGGTGCTCAGTGCGGCGCT CAGGGCGGTGCTGATGCCGGTGCTTCTGCTGGCAGTGAGGCATCATCTTCTGCCTCCGGCAACGTCTACTCCGTC GACTCCGTCATGGGCACCTTCGGCGGATCGGCTGGTGGTTCGGCCCCTGCCTCTGGCGGCAAGTCTGCCGTCAAG GCTCCGGCCTTTGTTGTGAAGCCTGGCGTCCAGGTCTCTGCCAAAGCCCAGTGTGGCGCTGACGGCTCTTGCGGA CAGTCAAAGGGCTCCTATGGCCAAAAGACTGAGGGCGCCTCTGACGGAAAGCCCCAGTGCGCCGACGGCTCTTGC GGACAGCCTCAGGGTTCTGCTGAGGGCCAGACGGCGCCGAAGTCGGGCAACGAGGATGAGATCGACTACTGCTAG
Gene	>Ophio5\|3284 ATGTATAGAATTTCGATGGCAGCCGGCGCCCTCGTGGCACTGCAGGGAGCCTGGGCCCAGCAGCCCTCTCAGACC GATGTCTATCCTGCCGAGCACACGGAAGAGGTCAAGGGTTACGAGGGACAATATGTGGATGCCTGCTCGCCGGTT GGCACCGTTCGATTCAACTCGACTTTCCCGCCTTGCCTGAGCGCTAGCAGGATCGAGCCCAGCTGTGCTCTTCCT TGGAAGGAGGGTCTGTCGGATGAGCAGCGTCAGGGAGATTGGAAGGCGGAGAGGAAGTGTCTCTGCGACGGTAGC TTCTTTGATGATGCTGGTGATGGGTGCCTCAAGTGCAAGGGGGCTTACCGTATCGACAGCGAGGAGAACCTTGCA GTCTGGAAGGGCATTTGGGACAAGGTCCGTGGCAGCTACTGCCAGGATGAGACCCTGACGGGTAACTTCTCGTCG TACTTCAAAGCAGCCTCAGACCAGTCTTCGTTCCAACCGGTCAAGGACCTTGGCACGAAGCCCGCAGCCGGAAGC ATCCCGATCGAGGCCTACTACAAGAACGACAAGCAGGGCCCGGGCCCTCTCCCCGGCTCTACGTCCTCCAACTCG ACCGCCCAGGACGAAGCCGGACCAATGGAGGGCGTCGCGCAGCTCACGCCCGACTGCCGCACCATGATTGGCGCC ATCGATACGCTTCCGGGCGGCAACAGTGCCAAGTTTTCCAACTCGAGCTCGGGGGCCATTCTCGTCTCTGTGCAG GCGACTTTCAACCGCATCTGCATCATCAACGGTGACCAGCGTGAAGTCAAGGCTGAGCGCAAGGAAGAGCCCGTT GTTACGCCCATTTCGCAGGAGGTCGTGCCCAAGGAAAAGGCTGCGGAGAAGGCTGATTTCGATATGACGGGTTGC TCGTGCGCTCAGAAGGTTGTTCCTGAGGGTAAGCAGGTTGTCCAGTCGAAGGAGTCCGTCGAGGCTTGGGCTATG GTCTCTGTCATGACTGGATTCGCCATGGTTGGTGGACAGCTGCCGCAGGGCTGTGAGGGTGCTCAGTGCGGCGCT CAGGGCGGTGCTGATGCCGGTGCTTCTGCTGGCAGTGAGGCATCATCTTCTGCCTCCGGCAACGTCTACTCCGTC GACTCCGTCATGGGCACCTTCGGCGGATCGGCTGGTGGTTCGGCCCCTGCCTCTGGCGGCAAGTCTGCCGTCAAG GCTCCGGCCTTTGTTGTGAAGCCTGGCGTCCAGGTCTCTGCCAAAGCCCAGTGTGGCGCTGACGGCTCTTGCGGA CAGTCAAAGGGCTCCTATGGCCAAAAGACTGAGGGCGCCTCTGACGGAAAGCCCCAGTGCGCCGACGGCTCTTGC GGACAGCCTCAGGGTTCTGCTGAGGGCCAGACGGCGCCGAAGTCGGGCAACGAGGATGAGATCGACTACTGCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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