Protein ID | Ophio5|3284 |
Gene name | |
Location | scaffold_26:58828..60253 |
Strand | - |
Gene length (bp) | 1425 |
Transcript length (bp) | 1425 |
Coding sequence length (bp) | 1422 |
Protein length (aa) | 474 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.107 | 0.0958 | 0.936 | 0.116 | 0.1314 | 0.021 | 0.1254 | 0.1732 | 0.1506 | 0.0013 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 19 | 0.999679 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 11833.50 | 0.00 | 24880.50 |
CcL | In ants, during behavior modification | 3.88 | 0.90 | 6.86 |
CcD | In ants, recently dead | 3.33 | 0.69 | 5.97 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.000286 | yes |
SC16a | CcD | 0.000286 | yes |
CcL | CcD | 0.734878 | no |
Orthofinder run ID | 4 |
Orthogroup | 3817 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3284 MYRISMAAGALVALQGAWAQQPSQTDVYPAEHTEEVKGYEGQYVDACSPVGTVRFNSTFPPCLSASRIEPSCALP WKEGLSDEQRQGDWKAERKCLCDGSFFDDAGDGCLKCKGAYRIDSEENLAVWKGIWDKVRGSYCQDETLTGNFSS YFKAASDQSSFQPVKDLGTKPAAGSIPIEAYYKNDKQGPGPLPGSTSSNSTAQDEAGPMEGVAQLTPDCRTMIGA IDTLPGGNSAKFSNSSSGAILVSVQATFNRICIINGDQREVKAERKEEPVVTPISQEVVPKEKAAEKADFDMTGC SCAQKVVPEGKQVVQSKESVEAWAMVSVMTGFAMVGGQLPQGCEGAQCGAQGGADAGASAGSEASSSASGNVYSV DSVMGTFGGSAGGSAPASGGKSAVKAPAFVVKPGVQVSAKAQCGADGSCGQSKGSYGQKTEGASDGKPQCADGSC GQPQGSAEGQTAPKSGNEDEIDYC |
Coding | >Ophio5|3284 ATGTATAGAATTTCGATGGCAGCCGGCGCCCTCGTGGCACTGCAGGGAGCCTGGGCCCAGCAGCCCTCTCAGACC GATGTCTATCCTGCCGAGCACACGGAAGAGGTCAAGGGTTACGAGGGACAATATGTGGATGCCTGCTCGCCGGTT GGCACCGTTCGATTCAACTCGACTTTCCCGCCTTGCCTGAGCGCTAGCAGGATCGAGCCCAGCTGTGCTCTTCCT TGGAAGGAGGGTCTGTCGGATGAGCAGCGTCAGGGAGATTGGAAGGCGGAGAGGAAGTGTCTCTGCGACGGTAGC TTCTTTGATGATGCTGGTGATGGGTGCCTCAAGTGCAAGGGGGCTTACCGTATCGACAGCGAGGAGAACCTTGCA GTCTGGAAGGGCATTTGGGACAAGGTCCGTGGCAGCTACTGCCAGGATGAGACCCTGACGGGTAACTTCTCGTCG TACTTCAAAGCAGCCTCAGACCAGTCTTCGTTCCAACCGGTCAAGGACCTTGGCACGAAGCCCGCAGCCGGAAGC ATCCCGATCGAGGCCTACTACAAGAACGACAAGCAGGGCCCGGGCCCTCTCCCCGGCTCTACGTCCTCCAACTCG ACCGCCCAGGACGAAGCCGGACCAATGGAGGGCGTCGCGCAGCTCACGCCCGACTGCCGCACCATGATTGGCGCC ATCGATACGCTTCCGGGCGGCAACAGTGCCAAGTTTTCCAACTCGAGCTCGGGGGCCATTCTCGTCTCTGTGCAG GCGACTTTCAACCGCATCTGCATCATCAACGGTGACCAGCGTGAAGTCAAGGCTGAGCGCAAGGAAGAGCCCGTT GTTACGCCCATTTCGCAGGAGGTCGTGCCCAAGGAAAAGGCTGCGGAGAAGGCTGATTTCGATATGACGGGTTGC TCGTGCGCTCAGAAGGTTGTTCCTGAGGGTAAGCAGGTTGTCCAGTCGAAGGAGTCCGTCGAGGCTTGGGCTATG GTCTCTGTCATGACTGGATTCGCCATGGTTGGTGGACAGCTGCCGCAGGGCTGTGAGGGTGCTCAGTGCGGCGCT CAGGGCGGTGCTGATGCCGGTGCTTCTGCTGGCAGTGAGGCATCATCTTCTGCCTCCGGCAACGTCTACTCCGTC GACTCCGTCATGGGCACCTTCGGCGGATCGGCTGGTGGTTCGGCCCCTGCCTCTGGCGGCAAGTCTGCCGTCAAG GCTCCGGCCTTTGTTGTGAAGCCTGGCGTCCAGGTCTCTGCCAAAGCCCAGTGTGGCGCTGACGGCTCTTGCGGA CAGTCAAAGGGCTCCTATGGCCAAAAGACTGAGGGCGCCTCTGACGGAAAGCCCCAGTGCGCCGACGGCTCTTGC GGACAGCCTCAGGGTTCTGCTGAGGGCCAGACGGCGCCGAAGTCGGGCAACGAGGATGAGATCGACTACTGC |
Transcript | >Ophio5|3284 ATGTATAGAATTTCGATGGCAGCCGGCGCCCTCGTGGCACTGCAGGGAGCCTGGGCCCAGCAGCCCTCTCAGACC GATGTCTATCCTGCCGAGCACACGGAAGAGGTCAAGGGTTACGAGGGACAATATGTGGATGCCTGCTCGCCGGTT GGCACCGTTCGATTCAACTCGACTTTCCCGCCTTGCCTGAGCGCTAGCAGGATCGAGCCCAGCTGTGCTCTTCCT TGGAAGGAGGGTCTGTCGGATGAGCAGCGTCAGGGAGATTGGAAGGCGGAGAGGAAGTGTCTCTGCGACGGTAGC TTCTTTGATGATGCTGGTGATGGGTGCCTCAAGTGCAAGGGGGCTTACCGTATCGACAGCGAGGAGAACCTTGCA GTCTGGAAGGGCATTTGGGACAAGGTCCGTGGCAGCTACTGCCAGGATGAGACCCTGACGGGTAACTTCTCGTCG TACTTCAAAGCAGCCTCAGACCAGTCTTCGTTCCAACCGGTCAAGGACCTTGGCACGAAGCCCGCAGCCGGAAGC ATCCCGATCGAGGCCTACTACAAGAACGACAAGCAGGGCCCGGGCCCTCTCCCCGGCTCTACGTCCTCCAACTCG ACCGCCCAGGACGAAGCCGGACCAATGGAGGGCGTCGCGCAGCTCACGCCCGACTGCCGCACCATGATTGGCGCC ATCGATACGCTTCCGGGCGGCAACAGTGCCAAGTTTTCCAACTCGAGCTCGGGGGCCATTCTCGTCTCTGTGCAG GCGACTTTCAACCGCATCTGCATCATCAACGGTGACCAGCGTGAAGTCAAGGCTGAGCGCAAGGAAGAGCCCGTT GTTACGCCCATTTCGCAGGAGGTCGTGCCCAAGGAAAAGGCTGCGGAGAAGGCTGATTTCGATATGACGGGTTGC TCGTGCGCTCAGAAGGTTGTTCCTGAGGGTAAGCAGGTTGTCCAGTCGAAGGAGTCCGTCGAGGCTTGGGCTATG GTCTCTGTCATGACTGGATTCGCCATGGTTGGTGGACAGCTGCCGCAGGGCTGTGAGGGTGCTCAGTGCGGCGCT CAGGGCGGTGCTGATGCCGGTGCTTCTGCTGGCAGTGAGGCATCATCTTCTGCCTCCGGCAACGTCTACTCCGTC GACTCCGTCATGGGCACCTTCGGCGGATCGGCTGGTGGTTCGGCCCCTGCCTCTGGCGGCAAGTCTGCCGTCAAG GCTCCGGCCTTTGTTGTGAAGCCTGGCGTCCAGGTCTCTGCCAAAGCCCAGTGTGGCGCTGACGGCTCTTGCGGA CAGTCAAAGGGCTCCTATGGCCAAAAGACTGAGGGCGCCTCTGACGGAAAGCCCCAGTGCGCCGACGGCTCTTGC GGACAGCCTCAGGGTTCTGCTGAGGGCCAGACGGCGCCGAAGTCGGGCAACGAGGATGAGATCGACTACTGCTAG |
Gene | >Ophio5|3284 ATGTATAGAATTTCGATGGCAGCCGGCGCCCTCGTGGCACTGCAGGGAGCCTGGGCCCAGCAGCCCTCTCAGACC GATGTCTATCCTGCCGAGCACACGGAAGAGGTCAAGGGTTACGAGGGACAATATGTGGATGCCTGCTCGCCGGTT GGCACCGTTCGATTCAACTCGACTTTCCCGCCTTGCCTGAGCGCTAGCAGGATCGAGCCCAGCTGTGCTCTTCCT TGGAAGGAGGGTCTGTCGGATGAGCAGCGTCAGGGAGATTGGAAGGCGGAGAGGAAGTGTCTCTGCGACGGTAGC TTCTTTGATGATGCTGGTGATGGGTGCCTCAAGTGCAAGGGGGCTTACCGTATCGACAGCGAGGAGAACCTTGCA GTCTGGAAGGGCATTTGGGACAAGGTCCGTGGCAGCTACTGCCAGGATGAGACCCTGACGGGTAACTTCTCGTCG TACTTCAAAGCAGCCTCAGACCAGTCTTCGTTCCAACCGGTCAAGGACCTTGGCACGAAGCCCGCAGCCGGAAGC ATCCCGATCGAGGCCTACTACAAGAACGACAAGCAGGGCCCGGGCCCTCTCCCCGGCTCTACGTCCTCCAACTCG ACCGCCCAGGACGAAGCCGGACCAATGGAGGGCGTCGCGCAGCTCACGCCCGACTGCCGCACCATGATTGGCGCC ATCGATACGCTTCCGGGCGGCAACAGTGCCAAGTTTTCCAACTCGAGCTCGGGGGCCATTCTCGTCTCTGTGCAG GCGACTTTCAACCGCATCTGCATCATCAACGGTGACCAGCGTGAAGTCAAGGCTGAGCGCAAGGAAGAGCCCGTT GTTACGCCCATTTCGCAGGAGGTCGTGCCCAAGGAAAAGGCTGCGGAGAAGGCTGATTTCGATATGACGGGTTGC TCGTGCGCTCAGAAGGTTGTTCCTGAGGGTAAGCAGGTTGTCCAGTCGAAGGAGTCCGTCGAGGCTTGGGCTATG GTCTCTGTCATGACTGGATTCGCCATGGTTGGTGGACAGCTGCCGCAGGGCTGTGAGGGTGCTCAGTGCGGCGCT CAGGGCGGTGCTGATGCCGGTGCTTCTGCTGGCAGTGAGGCATCATCTTCTGCCTCCGGCAACGTCTACTCCGTC GACTCCGTCATGGGCACCTTCGGCGGATCGGCTGGTGGTTCGGCCCCTGCCTCTGGCGGCAAGTCTGCCGTCAAG GCTCCGGCCTTTGTTGTGAAGCCTGGCGTCCAGGTCTCTGCCAAAGCCCAGTGTGGCGCTGACGGCTCTTGCGGA CAGTCAAAGGGCTCCTATGGCCAAAAGACTGAGGGCGCCTCTGACGGAAAGCCCCAGTGCGCCGACGGCTCTTGC GGACAGCCTCAGGGTTCTGCTGAGGGCCAGACGGCGCCGAAGTCGGGCAACGAGGATGAGATCGACTACTGCTAG |