Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3271
Gene name
Locationscaffold_26:32477..33605
Strand+
Gene length (bp)1128
Transcript length (bp)930
Coding sequence length (bp)927
Protein length (aa) 309

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02104 SURF1 SURF1 family 4.3E-53 76 284

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9Y810|SHY1_SCHPO Cytochrome oxidase assembly protein shy1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=shy1 PE=3 SV=1 72 296 3.0E-54
sp|Q15526|SURF1_HUMAN Surfeit locus protein 1 OS=Homo sapiens GN=SURF1 PE=1 SV=1 72 291 2.0E-47
sp|P09925|SURF1_MOUSE Surfeit locus protein 1 OS=Mus musculus GN=Surf1 PE=1 SV=3 72 298 1.0E-45
sp|Q9QXU2|SURF1_RAT Surfeit locus protein 1 OS=Rattus norvegicus GN=Surf1 PE=2 SV=1 72 299 2.0E-45
sp|A4IHH4|SURF1_XENTR Surfeit locus protein 1 OS=Xenopus tropicalis GN=surf1 PE=2 SV=1 72 302 4.0E-44
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Swissprot ID Swissprot Description Start End E-value
sp|Q9Y810|SHY1_SCHPO Cytochrome oxidase assembly protein shy1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=shy1 PE=3 SV=1 72 296 3.0E-54
sp|Q15526|SURF1_HUMAN Surfeit locus protein 1 OS=Homo sapiens GN=SURF1 PE=1 SV=1 72 291 2.0E-47
sp|P09925|SURF1_MOUSE Surfeit locus protein 1 OS=Mus musculus GN=Surf1 PE=1 SV=3 72 298 1.0E-45
sp|Q9QXU2|SURF1_RAT Surfeit locus protein 1 OS=Rattus norvegicus GN=Surf1 PE=2 SV=1 72 299 2.0E-45
sp|A4IHH4|SURF1_XENTR Surfeit locus protein 1 OS=Xenopus tropicalis GN=surf1 PE=2 SV=1 72 302 4.0E-44
sp|Q800L1|SURF1_CHICK Surfeit locus protein 1 OS=Gallus gallus GN=SURF1 PE=3 SV=1 73 291 4.0E-43
sp|O57593|SURF1_TAKRU Surfeit locus protein 1 (Fragment) OS=Takifugu rubripes GN=surf1 PE=3 SV=1 72 296 8.0E-42
sp|A9UWF0|SURF1_MONBE SURF1-like protein OS=Monosiga brevicollis GN=18583 PE=3 SV=1 64 307 5.0E-41
sp|Q9U4F3|SURF1_DROME SURF1-like protein OS=Drosophila melanogaster GN=Surf1 PE=2 SV=1 72 298 7.0E-39
sp|A8Y2C9|SURF1_CAEBR SURF1-like protein OS=Caenorhabditis briggsae GN=sft-1 PE=3 SV=1 69 296 3.0E-35
sp|Q9N5N8|SURF1_CAEEL SURF1-like protein OS=Caenorhabditis elegans GN=sft-1 PE=3 SV=1 19 296 2.0E-34
sp|P53266|SHY1_YEAST Cytochrome oxidase assembly protein SHY1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SHY1 PE=1 SV=1 36 288 3.0E-34
sp|Q556J9|SURF1_DICDI SURF1-like protein OS=Dictyostelium discoideum GN=surf1-1 PE=3 SV=2 65 298 1.0E-30
sp|Q9SE51|SURF1_ARATH Surfeit locus protein 1 OS=Arabidopsis thaliana GN=SURF1 PE=2 SV=1 71 300 9.0E-19
sp|Q1RJM4|SURF1_RICBR SURF1-like protein OS=Rickettsia bellii (strain RML369-C) GN=RBE_0359 PE=3 SV=1 78 299 4.0E-13
sp|Q4UN32|SURF1_RICFE SURF1-like protein OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=RF_0175 PE=3 SV=1 72 290 3.0E-09
sp|Q92GL0|SURF1_RICCN SURF1-like protein OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=RC1113 PE=3 SV=1 72 298 5.0E-09
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GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 67 89 22
2 275 294 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3271
MNNSRILLGCISPLRPSTTTARRLSTRPARHFSSTPVRADKQPVDDPNFISIVDAPPRIVSVRRRHGPGIILLAL
IPITAFALGTWQVQRLRWKSDLIAKLEDRLVRQPLPLPPHVDPSAIDDFDYRRVVASGYFRHDQEMLIGPRLRDG
QDGFLVITPLEREDASTVLVNRGWISKKRCHQRSRPESLTTGLVTVEGLLRKPWKKNMFTPHNQPEKGMFHFPDV
LQMAALTGSQPVWIESTSEHEFLKLVDLESRGIPIGRSAEVTLRNNHVQYIFTWYSLSLATSIMFYMLVKKPPSR
IARRLHPWR
Coding >Ophio5|3271
ATGAACAACTCGCGCATCCTACTCGGCTGCATCTCGCCACTCCGCCCCTCGACGACTACAGCTCGCCGTCTCTCG
ACCAGACCAGCCCGTCACTTCTCCTCGACACCAGTCCGCGCAGACAAGCAGCCCGTCGACGACCCGAATTTCATC
TCCATCGTCGATGCTCCCCCCCGCATCGTCAGCGTCCGCCGTAGACACGGCCCGGGAATCATCCTACTTGCTCTC
ATCCCCATTACAGCCTTCGCCCTCGGCACGTGGCAAGTTCAGCGCCTCCGCTGGAAATCAGACTTGATCGCCAAG
CTCGAAGACCGTCTCGTTCGCCAACCCCTTCCCCTTCCGCCCCATGTCGACCCTTCTGCCATCGACGACTTCGAC
TACCGTCGCGTTGTCGCTTCGGGTTATTTTCGCCATGACCAGGAGATGCTCATCGGGCCGCGCTTGCGTGATGGC
CAGGATGGCTTCCTTGTCATCACCCCGCTTGAGCGCGAAGACGCCTCGACTGTCCTGGTCAATCGTGGGTGGATC
AGCAAGAAGCGTTGCCATCAGAGGTCCCGTCCTGAGTCGTTGACAACGGGTCTCGTCACTGTCGAGGGATTGCTT
CGCAAGCCTTGGAAAAAGAACATGTTTACGCCGCATAACCAGCCTGAAAAGGGCATGTTTCATTTTCCCGACGTC
CTTCAGATGGCTGCTCTGACCGGCAGCCAGCCTGTCTGGATCGAATCCACCTCGGAGCACGAATTCCTGAAATTG
GTAGACCTTGAGTCCCGCGGCATTCCCATTGGGCGGTCTGCAGAGGTCACCTTGAGAAACAATCACGTCCAGTAC
ATCTTCACCTGGTATTCGCTGAGCTTGGCCACGTCCATAATGTTCTACATGCTGGTAAAAAAACCGCCATCAAGA
ATCGCCCGTCGTCTCCACCCGTGGAGA
Transcript >Ophio5|3271
ATGAACAACTCGCGCATCCTACTCGGCTGCATCTCGCCACTCCGCCCCTCGACGACTACAGCTCGCCGTCTCTCG
ACCAGACCAGCCCGTCACTTCTCCTCGACACCAGTCCGCGCAGACAAGCAGCCCGTCGACGACCCGAATTTCATC
TCCATCGTCGATGCTCCCCCCCGCATCGTCAGCGTCCGCCGTAGACACGGCCCGGGAATCATCCTACTTGCTCTC
ATCCCCATTACAGCCTTCGCCCTCGGCACGTGGCAAGTTCAGCGCCTCCGCTGGAAATCAGACTTGATCGCCAAG
CTCGAAGACCGTCTCGTTCGCCAACCCCTTCCCCTTCCGCCCCATGTCGACCCTTCTGCCATCGACGACTTCGAC
TACCGTCGCGTTGTCGCTTCGGGTTATTTTCGCCATGACCAGGAGATGCTCATCGGGCCGCGCTTGCGTGATGGC
CAGGATGGCTTCCTTGTCATCACCCCGCTTGAGCGCGAAGACGCCTCGACTGTCCTGGTCAATCGTGGGTGGATC
AGCAAGAAGCGTTGCCATCAGAGGTCCCGTCCTGAGTCGTTGACAACGGGTCTCGTCACTGTCGAGGGATTGCTT
CGCAAGCCTTGGAAAAAGAACATGTTTACGCCGCATAACCAGCCTGAAAAGGGCATGTTTCATTTTCCCGACGTC
CTTCAGATGGCTGCTCTGACCGGCAGCCAGCCTGTCTGGATCGAATCCACCTCGGAGCACGAATTCCTGAAATTG
GTAGACCTTGAGTCCCGCGGCATTCCCATTGGGCGGTCTGCAGAGGTCACCTTGAGAAACAATCACGTCCAGTAC
ATCTTCACCTGGTATTCGCTGAGCTTGGCCACGTCCATAATGTTCTACATGCTGGTAAAAAAACCGCCATCAAGA
ATCGCCCGTCGTCTCCACCCGTGGAGATAG
Gene >Ophio5|3271
ATGAACAACTCGCGCATCCTACTCGGCTGCATCTCGCCACTCCGCCCCTCGACGACTACAGCTCGCCGTCTCTCG
ACCAGACCAGCCCGTCACTTCTCCTCGACACCAGTCCGCGCAGACAAGCAGCCCGTCGACGACCCGAATTTCATC
TCCATCGTCGATGCTCCCCCCCGCATCGTCAGCGTCCGCCGTAGACACGGCCCGGGAATCATCCTACTTGGTGCG
TATGGAATGAAACTCCACGCTGCCTCAGCTACTCCTGCTCACCCACCCTATTTCACATAGCTCTCATCCCCATTA
CAGCCTTCGCCCTCGGCACGTGGCAAGTTCAGCGCCTCCGCTGGAAATCAGACTTGATCGCCAAGCTCGAAGACC
GTCTCGTTCGCCAACCCCTTCCCCTTCCGCCCCATGTCGACCCTTCTGCCATCGACGACTTCGACTACCGTCGCG
TTGTCGCTTCGGGTTATTTTCGCCATGACCAGGAGATGCTCATCGGGCCGCGCTTGCGTGATGGCCAGGATGGCT
TCCTTGTCATCACCCCGCTTGAGCGCGAAGACGCCTCGACTGTCCTGGTCAATCGTGGGTGGATCAGCAAGAAGC
GTTGCCATCAGAGGTCCCGTCCTGAGTCGTTGACAACGGGTCTCGTCACTGTCGAGGGATTGCTTCGCAAGCCTT
GGAAAAAGAACATGTTTACGCCGCATAACCAGCCTGAAAAGGGCATGTTTCATTTTCCCGACGTCCTTCAGATGG
CTGCTCTGACCGGCAGCCAGCCTGTCTGGATCGAATCCACCTCGGGTATTTCCGCCTTGCTCCCCTTTTCTGCTT
GTTTTCCAGCACCTCCTGGAGCTTCCCGCCCGAAAGCTAAATGACGGCAGAGCACGAATTCCTGAAATTGGTAGA
CCTTGAGTCCCGCGGCATTCCCATTGGGCGGTCTGCAGAGGTCACCTTGAGAAACAATCACGTCCAGTACATCTT
CACCTGGTACGCCCTCCTGCCTCCGTCCGTGAAAAAGGTACCGGACTGACACGACCCAGGTATTCGCTGAGCTTG
GCCACGTCCATAATGTTCTACATGCTGGTAAAAAAACCGCCATCAAGAATCGCCCGTCGTCTCCACCCGTGGAGA
TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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