Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|3256
Gene name
Location	scaffold_26:6188..6918
Strand	-
Gene length (bp)	730
Transcript length (bp)	618
Coding sequence length (bp)	615
Protein length (aa)	205

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05730	CFEM	CFEM domain	1.1E-13	116	182

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|D4AZC5\|CFMA_ARTBC	GPI-anchored CFEM domain protein ARB_01545 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01545 PE=1 SV=2	114	182	4.0E-12
sp\|Q4WLB9\|CFMA_ASPFU	GPI-anchored CFEM domain protein A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cfmA PE=1 SV=1	119	165	3.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 18	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|3256 MRAIYLLVGALVAFTAAQDPEAPPPDAPAPPADSAAPPPDPAAPPPPDPAAPPPDPAAPVDPAAPPPDPEAPPVD PAAPPPDPAAAPPEQAPDQNQEAPGDDQEATEDNSNPGMGRLPRCARTCARNMLSASEAEELGCNDGDFQCLCSN QDFFFGLRDCTRQNCQGNNVNEILQFGQTICQANDVPTNSTQFFRARRRALLYRV
Coding	>Ophio5\|3256 ATGAGGGCAATTTATCTCCTTGTCGGCGCTCTCGTCGCCTTCACCGCTGCCCAGGATCCGGAAGCGCCTCCTCCA GATGCACCGGCCCCTCCGGCGGACTCGGCGGCGCCTCCCCCTGACCCTGCCGCGCCGCCCCCTCCGGACCCGGCC GCTCCCCCTCCAGATCCGGCGGCGCCCGTGGATCCCGCAGCACCTCCCCCGGACCCCGAGGCACCGCCTGTAGAC CCAGCAGCACCCCCTCCAGACCCTGCGGCAGCTCCTCCAGAGCAGGCGCCGGATCAGAACCAGGAGGCACCAGGT GACGACCAGGAAGCGACAGAGGACAATTCGAACCCCGGTATGGGCCGGCTCCCCAGGTGCGCGAGGACTTGCGCC AGAAACATGCTCTCTGCAAGCGAGGCCGAAGAGCTAGGCTGCAACGATGGCGACTTTCAATGCCTCTGCAGCAAC CAGGATTTCTTCTTTGGCCTTCGTGACTGCACCCGGCAGAACTGCCAAGGGAACAACGTCAACGAGATTCTGCAG TTCGGTCAGACCATCTGCCAAGCAAACGACGTGCCGACGAATTCGACGCAATTCTTCAGGGCCAGGCGCCGAGCG TTGCTATATCGTGTT
Transcript	>Ophio5\|3256 ATGAGGGCAATTTATCTCCTTGTCGGCGCTCTCGTCGCCTTCACCGCTGCCCAGGATCCGGAAGCGCCTCCTCCA GATGCACCGGCCCCTCCGGCGGACTCGGCGGCGCCTCCCCCTGACCCTGCCGCGCCGCCCCCTCCGGACCCGGCC GCTCCCCCTCCAGATCCGGCGGCGCCCGTGGATCCCGCAGCACCTCCCCCGGACCCCGAGGCACCGCCTGTAGAC CCAGCAGCACCCCCTCCAGACCCTGCGGCAGCTCCTCCAGAGCAGGCGCCGGATCAGAACCAGGAGGCACCAGGT GACGACCAGGAAGCGACAGAGGACAATTCGAACCCCGGTATGGGCCGGCTCCCCAGGTGCGCGAGGACTTGCGCC AGAAACATGCTCTCTGCAAGCGAGGCCGAAGAGCTAGGCTGCAACGATGGCGACTTTCAATGCCTCTGCAGCAAC CAGGATTTCTTCTTTGGCCTTCGTGACTGCACCCGGCAGAACTGCCAAGGGAACAACGTCAACGAGATTCTGCAG TTCGGTCAGACCATCTGCCAAGCAAACGACGTGCCGACGAATTCGACGCAATTCTTCAGGGCCAGGCGCCGAGCG TTGCTATATCGTGTTTGA
Gene	>Ophio5\|3256 ATGAGGGCAATTTATCTCCTTGTCGGCGCTCTCGTCGCCTTCACCGCTGCCCAGGATCCGGAAGCGCCTCCTCCA GATGCACCGGCCCCTCCGGCGGACTCGGCGGCGCCTCCCCCTGACCCTGCCGCGCCGCCCCCTCCGGACCCGGCC GCTCCCCCTCCAGATCCGGCGGCGCCCGTGGATCCCGCAGCACCTCCCCCGGACCCCGAGGCACCGCCTGTAGAC CCAGCAGCACCCCCTCCAGACCCTGCGGCAGCTCCTCCAGAGCAGGCGCCGGATCAGAACCAGGAGGCACCAGGT GACGACCAGGAAGCGACAGAGGACAATTCGAACCCCGGTATGGGCCGGCTCCCCAGGTGCGCGGTAAGTACCATC TTTACCCCTAAGCCGTTGAGCGCCATGCTAAGACGGAAAATCAGAGGACTTGCGCCAGAAACATGCTCTCTGCAA GCGAGGCCGAAGAGCTAGGCTGCAACGATGGCGACTTTCAATGCCTCTGCAGCAACCAGGATTTCTTCTTTGGCC TTCGTGACTGCACCCGGCAGAACTGCCAAGGGAACAACGTCAACGAGATTCTGCAGTTCGGTCAGACCATCTGCC AAGGTTGGGTTTCTTGTGCTCCAGACTGTTGGTTAGAACCTCACGGCTGACCGTCACAGCAAACGACGTGCCGAC GAATTCGACGCAATTCTTCAGGGCCAGGCGCCGAGCGTTGCTATATCGTGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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