© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|3209 |
| Gene name | |
| Location | scaffold_254:5854..7001 |
| Strand | - |
| Gene length (bp) | 1147 |
| Transcript length (bp) | 1083 |
| Coding sequence length (bp) | 1080 |
| Protein length (aa) | 360 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 1.4E-17 | 58 | 335 |
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 1.3E-12 | 59 | 342 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P80299|HYES_RAT | Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1 | 58 | 348 | 5.0E-42 |
| sp|P34914|HYES_MOUSE | Bifunctional epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2 | 61 | 348 | 3.0E-41 |
| sp|P34913|HYES_HUMAN | Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2 | 58 | 358 | 1.0E-39 |
| sp|Q6Q2C2|HYES_PIG | Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1 | 58 | 360 | 8.0E-39 |
| sp|O31581|YFHM_BACSU | AB hydrolase superfamily protein YfhM OS=Bacillus subtilis (strain 168) GN=yfhM PE=3 SV=1 | 31 | 349 | 9.0E-23 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P80299|HYES_RAT | Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1 | 58 | 348 | 5.0E-42 |
| sp|P34914|HYES_MOUSE | Bifunctional epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2 | 61 | 348 | 3.0E-41 |
| sp|P34913|HYES_HUMAN | Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2 | 58 | 358 | 1.0E-39 |
| sp|Q6Q2C2|HYES_PIG | Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1 | 58 | 360 | 8.0E-39 |
| sp|O31581|YFHM_BACSU | AB hydrolase superfamily protein YfhM OS=Bacillus subtilis (strain 168) GN=yfhM PE=3 SV=1 | 31 | 349 | 9.0E-23 |
| sp|Q6IE26|EPHX4_MOUSE | Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=2 | 39 | 341 | 4.0E-18 |
| sp|Q8IUS5|EPHX4_HUMAN | Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2 | 39 | 358 | 1.0E-17 |
| sp|G5EBI4|CEEH1_CAEEL | Epoxide hydrolase 1 OS=Caenorhabditis elegans GN=ceeh-1 PE=1 SV=1 | 45 | 351 | 1.0E-17 |
| sp|Q0IIS3|EPHX3_XENTR | Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1 | 39 | 355 | 6.0E-15 |
| sp|Q3V1F8|EPHX3_MOUSE | Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2 | 30 | 352 | 7.0E-14 |
| sp|G5EDL5|CEEH2_CAEEL | Epoxide hydrolase 2 OS=Caenorhabditis elegans GN=ceeh-2 PE=1 SV=1 | 45 | 349 | 1.0E-12 |
| sp|Q9H6B9|EPHX3_HUMAN | Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1 | 59 | 306 | 4.0E-11 |
| sp|P59336|DHAA_RHOSD | Haloalkane dehalogenase OS=Rhodococcus sp. (strain TDTM0003) GN=dhaA PE=1 SV=1 | 38 | 348 | 2.0E-08 |
| sp|O52866|HYES_CORS2 | Soluble epoxide hydrolase OS=Corynebacterium sp. (strain C12) PE=1 SV=3 | 31 | 155 | 4.0E-08 |
| sp|P0A3G3|DHAA_RHOSO | Haloalkane dehalogenase OS=Rhodococcus sp. GN=dhaA PE=1 SV=1 | 38 | 348 | 1.0E-07 |
| sp|P0A3G2|DHAA_RHORH | Haloalkane dehalogenase OS=Rhodococcus rhodochrous GN=dhaA PE=1 SV=1 | 38 | 348 | 1.0E-07 |
| sp|P0A3G4|DHAA_PSEPV | Haloalkane dehalogenase OS=Pseudomonas pavonaceae GN=dhaA PE=1 SV=1 | 38 | 348 | 1.0E-07 |
| sp|Q01398|DEH1_MORSB | Haloacetate dehalogenase H-1 OS=Moraxella sp. (strain B) GN=dehH1 PE=1 SV=1 | 29 | 350 | 7.0E-07 |
| sp|Q9ZER0|DHAA_MYCSX | Haloalkane dehalogenase OS=Mycobacterium sp. (strain GP1) GN=dhaAF PE=2 SV=1 | 38 | 166 | 1.0E-06 |
| sp|Q6NAM1|DEHA_RHOPA | Fluoroacetate dehalogenase OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=RPA1163 PE=1 SV=1 | 37 | 349 | 3.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3209 MTLGQLTHIKSSGIPTWPFDYELRPGNDPRVRREEATVNGKTYSYVVGEPSDTPPVDTVFLIHGFPDLGFGWRCQ VPFLIGLGLRVVVPDMLGYAASDSPKDLRQFSRKAISDDIKELAAILVGHQPIILGGHDWGGALVWRIALWHPKL VKAVFSVCTPFFNIPTSRFVSLEQHLADGNLTHFQYQLQFKGPDVENVIQGKEKIRQFLSAMYGGTDNNGELGFS TEQGVLLHKLPEIGSPPLLSEEELDYYVDQYMLQEAPQLRGPLNWYRMSQIDWEEELSMAENKPVLEMPTLFIAA TEDIALPPSLSAGMERHMTNLTRGEVQSSHWALTQAPDAVNEQLGKWLSRFLKLDARSVL |
| Coding | >Ophio5|3209 ATGACGTTAGGTCAATTGACACATATAAAAAGCAGTGGCATTCCCACATGGCCATTTGACTACGAGCTGCGTCCA GGCAACGACCCGCGCGTGCGTCGCGAAGAGGCCACAGTCAACGGCAAGACGTACAGCTACGTCGTGGGCGAACCG TCCGACACGCCGCCCGTCGACACCGTCTTTCTCATCCACGGCTTTCCGGACCTGGGCTTCGGATGGCGCTGCCAG GTTCCCTTCCTCATCGGGCTGGGCCTGCGCGTCGTCGTGCCCGATATGCTGGGCTACGCCGCCAGCGACAGCCCC AAGGACCTGCGCCAATTTTCCCGCAAGGCCATCTCCGACGACATCAAGGAGCTAGCCGCCATCTTGGTGGGCCAT CAGCCCATCATCCTCGGCGGACACGACTGGGGCGGCGCTCTGGTTTGGCGGATTGCCTTGTGGCACCCGAAATTA GTCAAGGCTGTATTCAGCGTCTGCACGCCCTTCTTCAACATCCCGACATCCCGCTTCGTCTCTCTGGAGCAGCAC CTTGCCGACGGCAACTTGACCCACTTCCAATATCAGCTGCAGTTCAAGGGTCCCGACGTCGAGAACGTCATCCAG GGCAAGGAAAAGATTCGTCAATTCCTCAGCGCCATGTACGGCGGAACTGACAACAACGGCGAACTTGGCTTCTCT ACCGAACAGGGCGTCTTGCTGCATAAGCTGCCCGAGATTGGCAGCCCGCCGCTGCTGTCGGAAGAGGAGCTCGAC TATTACGTCGACCAGTACATGCTTCAGGAGGCTCCCCAGCTGCGCGGGCCGCTCAATTGGTACCGCATGAGCCAA ATTGACTGGGAGGAAGAGCTTTCCATGGCCGAAAACAAGCCCGTTTTGGAGATGCCAACCCTCTTCATCGCCGCA ACCGAAGACATTGCACTTCCGCCATCCTTGTCTGCCGGCATGGAACGGCACATGACCAACCTGACGAGAGGAGAG GTCCAGAGCTCGCACTGGGCGCTGACACAGGCACCCGACGCCGTCAATGAGCAATTGGGCAAGTGGCTGAGTCGT TTTCTCAAGCTCGATGCCCGATCGGTCTTG |
| Transcript | >Ophio5|3209 ATGACGTTAGGTCAATTGACACATATAAAAAGCAGTGGCATTCCCACATGGCCATTTGACTACGAGCTGCGTCCA GGCAACGACCCGCGCGTGCGTCGCGAAGAGGCCACAGTCAACGGCAAGACGTACAGCTACGTCGTGGGCGAACCG TCCGACACGCCGCCCGTCGACACCGTCTTTCTCATCCACGGCTTTCCGGACCTGGGCTTCGGATGGCGCTGCCAG GTTCCCTTCCTCATCGGGCTGGGCCTGCGCGTCGTCGTGCCCGATATGCTGGGCTACGCCGCCAGCGACAGCCCC AAGGACCTGCGCCAATTTTCCCGCAAGGCCATCTCCGACGACATCAAGGAGCTAGCCGCCATCTTGGTGGGCCAT CAGCCCATCATCCTCGGCGGACACGACTGGGGCGGCGCTCTGGTTTGGCGGATTGCCTTGTGGCACCCGAAATTA GTCAAGGCTGTATTCAGCGTCTGCACGCCCTTCTTCAACATCCCGACATCCCGCTTCGTCTCTCTGGAGCAGCAC CTTGCCGACGGCAACTTGACCCACTTCCAATATCAGCTGCAGTTCAAGGGTCCCGACGTCGAGAACGTCATCCAG GGCAAGGAAAAGATTCGTCAATTCCTCAGCGCCATGTACGGCGGAACTGACAACAACGGCGAACTTGGCTTCTCT ACCGAACAGGGCGTCTTGCTGCATAAGCTGCCCGAGATTGGCAGCCCGCCGCTGCTGTCGGAAGAGGAGCTCGAC TATTACGTCGACCAGTACATGCTTCAGGAGGCTCCCCAGCTGCGCGGGCCGCTCAATTGGTACCGCATGAGCCAA ATTGACTGGGAGGAAGAGCTTTCCATGGCCGAAAACAAGCCCGTTTTGGAGATGCCAACCCTCTTCATCGCCGCA ACCGAAGACATTGCACTTCCGCCATCCTTGTCTGCCGGCATGGAACGGCACATGACCAACCTGACGAGAGGAGAG GTCCAGAGCTCGCACTGGGCGCTGACACAGGCACCCGACGCCGTCAATGAGCAATTGGGCAAGTGGCTGAGTCGT TTTCTCAAGCTCGATGCCCGATCGGTCTTGTGA |
| Gene | >Ophio5|3209 ATGACGTTAGGTCAATTGACACATATAAAAAGCAGTGGCATTCCCACATGGCCATTTGACTACGAGGTAGGTACG AAACAGCGCGCAAAGTCAGACAAGGCCGCAAGATATAATCATGCAAGTCGATAAGCTGCGTCCAGGCAACGACCC GCGCGTGCGTCGCGAAGAGGCCACAGTCAACGGCAAGACGTACAGCTACGTCGTGGGCGAACCGTCCGACACGCC GCCCGTCGACACCGTCTTTCTCATCCACGGCTTTCCGGACCTGGGCTTCGGATGGCGCTGCCAGGTTCCCTTCCT CATCGGGCTGGGCCTGCGCGTCGTCGTGCCCGATATGCTGGGCTACGCCGCCAGCGACAGCCCCAAGGACCTGCG CCAATTTTCCCGCAAGGCCATCTCCGACGACATCAAGGAGCTAGCCGCCATCTTGGTGGGCCATCAGCCCATCAT CCTCGGCGGACACGACTGGGGCGGCGCTCTGGTTTGGCGGATTGCCTTGTGGCACCCGAAATTAGTCAAGGCTGT ATTCAGCGTCTGCACGCCCTTCTTCAACATCCCGACATCCCGCTTCGTCTCTCTGGAGCAGCACCTTGCCGACGG CAACTTGACCCACTTCCAATATCAGCTGCAGTTCAAGGGTCCCGACGTCGAGAACGTCATCCAGGGCAAGGAAAA GATTCGTCAATTCCTCAGCGCCATGTACGGCGGAACTGACAACAACGGCGAACTTGGCTTCTCTACCGAACAGGG CGTCTTGCTGCATAAGCTGCCCGAGATTGGCAGCCCGCCGCTGCTGTCGGAAGAGGAGCTCGACTATTACGTCGA CCAGTACATGCTTCAGGAGGCTCCCCAGCTGCGCGGGCCGCTCAATTGGTACCGCATGAGCCAAATTGACTGGGA GGAAGAGCTTTCCATGGCCGAAAACAAGCCCGTTTTGGAGATGCCAACCCTCTTCATCGCCGCAACCGAAGACAT TGCACTTCCGCCATCCTTGTCTGCCGGCATGGAACGGCACATGACCAACCTGACGAGAGGAGAGGTCCAGAGCTC GCACTGGGCGCTGACACAGGCACCCGACGCCGTCAATGAGCAATTGGGCAAGTGGCTGAGTCGTTTTCTCAAGCT CGATGCCCGATCGGTCTTGTGA |