Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3206
Gene name
Locationscaffold_253:24971..26705
Strand+
Gene length (bp)1734
Transcript length (bp)1623
Coding sequence length (bp)1620
Protein length (aa) 540

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06824 Glyco_hydro_125 Metal-independent alpha-mannosidase (GH125) 1.8E-180 85 520

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q10449|MU157_SCHPO Meiotically up-regulated gene 157 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug157 PE=1 SV=1 32 530 0.0E+00

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3206
MLQLLAASWLCLSLSGPVAGAGGKIPAGRYAEACPNYAAYAATAHQPPSTGKLKLPFQRPDPRCRTFSSQEIERV
IKEVTSKMTDPDMARLFENAFPSTTDTTVKFHTRGKDNGFVRTDGFHYAQDEGAWEGPQSFIITGDIVAEWLRDS
TNQLRPYQALASKDPAIFDLILGAINTQSEYVIESPYCNAFQPPPISKLPVSSNGQDDTVHPVYEPSAVFECKYE
LDSLAHFLALANDFYDHTASTKFATQRWFLAINTVIGVLQQQSQSTFNSDTGAYVRNDYTFQRMTNTGTETLALQ
GVGNPLNDGTGLVRSAFRPSDDATILGFFIPANAMMSVELGRTSKLLQALGKSSLAATVQKWSEQIRTGVLEHGV
VQHKKYGKVFAYEVDGYGSSILMDDANYPSLLALPVMGFCDGKDAVYQNTRRMILDRKGNPYFLAGKEFKGIGGP
HIGLRNAWPMSVLMQAQTSDDDTEIKECLDLVLKSSQLGLVHESVDVDRIKQYTRSWFAWANGVFAVTIMDLAKR
KPHLIFGPGAAPYEP
Coding >Ophio5|3206
ATGTTGCAGCTGCTCGCCGCCAGTTGGCTGTGCTTGAGCCTGAGCGGCCCAGTTGCTGGCGCCGGAGGCAAGATA
CCGGCTGGAAGATACGCCGAGGCCTGTCCCAATTACGCGGCATACGCGGCAACGGCCCACCAACCACCGAGCACC
GGGAAGCTCAAATTGCCCTTTCAGCGGCCTGATCCACGATGCCGCACCTTTAGCTCGCAAGAGATCGAACGGGTC
ATCAAGGAGGTGACATCCAAGATGACGGACCCGGACATGGCCCGTCTGTTCGAAAACGCGTTCCCCTCGACCACC
GACACGACGGTCAAGTTCCACACTAGGGGAAAGGACAACGGCTTCGTCCGCACCGATGGCTTTCACTATGCTCAG
GACGAGGGAGCGTGGGAGGGACCTCAGTCCTTTATCATCACGGGTGACATCGTGGCCGAGTGGCTGCGGGACTCG
ACAAACCAGTTGCGTCCTTATCAAGCTCTCGCCAGCAAGGACCCGGCCATCTTTGACTTGATCCTGGGCGCCATA
AACACCCAGTCCGAGTACGTCATCGAGTCTCCCTACTGTAACGCCTTCCAGCCGCCTCCCATCAGCAAGCTTCCA
GTCTCGTCCAATGGCCAGGACGACACGGTCCATCCGGTTTACGAACCGAGCGCCGTCTTCGAGTGCAAGTACGAG
CTGGACTCTCTGGCCCATTTTCTGGCGCTCGCCAACGACTTCTACGACCATACGGCATCAACCAAGTTTGCCACT
CAACGCTGGTTCCTGGCCATCAACACTGTGATCGGGGTCCTCCAGCAACAGTCACAGTCGACGTTCAATTCGGAC
ACTGGCGCCTACGTCAGAAACGACTACACTTTTCAGCGCATGACCAACACCGGGACGGAAACGCTGGCTCTGCAA
GGCGTGGGGAATCCGCTCAACGACGGCACGGGCCTGGTCCGGTCCGCGTTCCGACCGAGCGACGACGCCACCATT
CTGGGCTTTTTCATCCCGGCTAATGCTATGATGTCGGTTGAGCTCGGCCGGACGTCCAAGCTTCTTCAGGCCTTG
GGGAAGAGCTCGCTGGCGGCGACGGTGCAGAAGTGGAGCGAGCAGATCCGAACAGGTGTACTTGAGCACGGCGTG
GTCCAGCACAAGAAGTACGGCAAAGTATTTGCCTACGAGGTCGACGGATACGGCTCATCGATTCTCATGGACGAC
GCCAACTATCCGTCGTTGCTTGCTCTTCCCGTCATGGGGTTCTGCGACGGCAAAGACGCCGTGTATCAAAACACA
CGGCGGATGATACTGGATAGGAAGGGGAACCCTTACTTCTTGGCTGGCAAGGAGTTCAAGGGCATCGGAGGACCT
CACATAGGGTTGCGCAACGCGTGGCCGATGAGCGTGCTGATGCAGGCACAGACGTCCGACGACGACACTGAGATC
AAGGAATGTCTGGACCTCGTGCTAAAGTCGAGTCAGCTGGGTCTCGTGCACGAGAGCGTCGACGTGGATCGCATC
AAGCAGTACACACGCAGTTGGTTTGCGTGGGCCAACGGCGTCTTTGCTGTGACGATAATGGACTTGGCCAAGAGG
AAGCCGCACCTGATCTTCGGGCCAGGCGCGGCGCCTTACGAGCCA
Transcript >Ophio5|3206
ATGTTGCAGCTGCTCGCCGCCAGTTGGCTGTGCTTGAGCCTGAGCGGCCCAGTTGCTGGCGCCGGAGGCAAGATA
CCGGCTGGAAGATACGCCGAGGCCTGTCCCAATTACGCGGCATACGCGGCAACGGCCCACCAACCACCGAGCACC
GGGAAGCTCAAATTGCCCTTTCAGCGGCCTGATCCACGATGCCGCACCTTTAGCTCGCAAGAGATCGAACGGGTC
ATCAAGGAGGTGACATCCAAGATGACGGACCCGGACATGGCCCGTCTGTTCGAAAACGCGTTCCCCTCGACCACC
GACACGACGGTCAAGTTCCACACTAGGGGAAAGGACAACGGCTTCGTCCGCACCGATGGCTTTCACTATGCTCAG
GACGAGGGAGCGTGGGAGGGACCTCAGTCCTTTATCATCACGGGTGACATCGTGGCCGAGTGGCTGCGGGACTCG
ACAAACCAGTTGCGTCCTTATCAAGCTCTCGCCAGCAAGGACCCGGCCATCTTTGACTTGATCCTGGGCGCCATA
AACACCCAGTCCGAGTACGTCATCGAGTCTCCCTACTGTAACGCCTTCCAGCCGCCTCCCATCAGCAAGCTTCCA
GTCTCGTCCAATGGCCAGGACGACACGGTCCATCCGGTTTACGAACCGAGCGCCGTCTTCGAGTGCAAGTACGAG
CTGGACTCTCTGGCCCATTTTCTGGCGCTCGCCAACGACTTCTACGACCATACGGCATCAACCAAGTTTGCCACT
CAACGCTGGTTCCTGGCCATCAACACTGTGATCGGGGTCCTCCAGCAACAGTCACAGTCGACGTTCAATTCGGAC
ACTGGCGCCTACGTCAGAAACGACTACACTTTTCAGCGCATGACCAACACCGGGACGGAAACGCTGGCTCTGCAA
GGCGTGGGGAATCCGCTCAACGACGGCACGGGCCTGGTCCGGTCCGCGTTCCGACCGAGCGACGACGCCACCATT
CTGGGCTTTTTCATCCCGGCTAATGCTATGATGTCGGTTGAGCTCGGCCGGACGTCCAAGCTTCTTCAGGCCTTG
GGGAAGAGCTCGCTGGCGGCGACGGTGCAGAAGTGGAGCGAGCAGATCCGAACAGGTGTACTTGAGCACGGCGTG
GTCCAGCACAAGAAGTACGGCAAAGTATTTGCCTACGAGGTCGACGGATACGGCTCATCGATTCTCATGGACGAC
GCCAACTATCCGTCGTTGCTTGCTCTTCCCGTCATGGGGTTCTGCGACGGCAAAGACGCCGTGTATCAAAACACA
CGGCGGATGATACTGGATAGGAAGGGGAACCCTTACTTCTTGGCTGGCAAGGAGTTCAAGGGCATCGGAGGACCT
CACATAGGGTTGCGCAACGCGTGGCCGATGAGCGTGCTGATGCAGGCACAGACGTCCGACGACGACACTGAGATC
AAGGAATGTCTGGACCTCGTGCTAAAGTCGAGTCAGCTGGGTCTCGTGCACGAGAGCGTCGACGTGGATCGCATC
AAGCAGTACACACGCAGTTGGTTTGCGTGGGCCAACGGCGTCTTTGCTGTGACGATAATGGACTTGGCCAAGAGG
AAGCCGCACCTGATCTTCGGGCCAGGCGCGGCGCCTTACGAGCCATGA
Gene >Ophio5|3206
ATGTTGCAGCTGCTCGCCGCCAGTTGGCTGTGCTTGAGCCTGAGCGGCCCAGTTGCTGGCGCCGGAGGCAAGATA
CCGGCTGGAAGATACGCCGAGGCCTGTCCCAATTACGCGGCATACGCGGCAACGGCCCAGTGAGTCGCGTTGACC
CAGTCTTGTTTGCTTCAGTCTGACGTGCTCTACGCAGCCAACCACCGAGCACCGGGAAGCTCAAATTGCCCTTTC
AGCGGCCTGATCCACGATGCCGCACCTTTAGCTCGCAAGAGATCGAACGGGTCATCAAGGAGGTGACATCCAAGA
TGACGGACCCGGACATGGCCCGTCTGTTCGAAAACGCGTTCCCCTCGACCACCGACACGACGGTCAAGTTCCACA
CTAGGGGAAAGGACAACGGCTTCGTCCGCACCGATGGCTTTCACTATGCTCAGGACGAGGGAGCGTGGGAGGGAC
CTCAGTCCTTTATCATCACGGGTGACATCGTGGCCGAGTGGCTGCGGGACTCGACAAACCAGTTGCGTCCTTATC
AAGCTCTCGCCAGCAAGGACCCGGCCATCTTTGACTTGATCCTGGGCGCCATAAACACCCAGTCCGAGTACGTCA
TCGAGTCTCCCTACTGTAACGCCTTCCAGCCGCCTCCCATCAGCAAGCTTCCAGTCTCGTCCAATGGCCAGGACG
ACACGGTCCATCCGGTTTACGAACCGAGCGCCGTCTTCGAGTGCAAGTACGAGCTGGACTCTCTGGCCCATTTTC
TGGCGCTCGCCAACGACTTCTACGACCATACGGCATCAACCAAGTTTGCCACTCAACGCTGGTTCCTGGCCATCA
ACACTGTGATCGGGGTCCTCCAGCAACAGTCACAGTCGACGTTCAATTCGGACACTGGCGCCTACGTCAGAAACG
ACTACACTTTTCAGCGCATGACCAACACCGGGACGGAAACGCTGGCTCTGCAAGGCGTGGGGAATCCGCTCAACG
ACGGCACGGGCCTGGTCCGGTCCGCGTTCCGACCGAGCGACGACGCCACCATTCTGGGCTTTTTCATCCCGGCTA
ATGCTATGATGTCGGTTGAGCTCGGCCGGACGTCCAAGCTTCTTCAGGCCTTGGGGAAGAGCTCGCTGGCGGCGA
CGGTGCAGAAGTGGAGCGAGCAGATCCGAACAGGTGTACTTGAGCACGGCGTGGTCCAGCACAAGAAGTACGGCA
AAGTATTTGCCTACGAGGTCGACGGATACGGCTCATCGATTCTCATGGACGACGCCAACTATCCGTCGTTGCTTG
CTCTTCCCGTCATGGGGTTCTGCGACGGCAAAGACGCCGTGTATCAAAACACACGGCGGATGATACTGGATAGGA
AGGGGAACCCTTACTTCTTGGCTGGCAAGGAGTTCAAGGGCATCGGAGGTTTGTCTGGCAAGAAAAGCTTGCTCG
AGCTGGGCTTAGGCTGACCGTCCTTTCACAGGACCTCACATAGGGTTGCGCAACGCGTGGCCGATGAGCGTGCTG
ATGCAGGCACAGACGTCCGACGACGACACTGAGATCAAGGAATGTCTGGACCTCGTGCTAAAGTCGAGTCAGCTG
GGTCTCGTGCACGAGAGCGTCGACGTGGATCGCATCAAGCAGTACACACGCAGTTGGTTTGCGTGGGCCAACGGC
GTCTTTGCTGTGACGATAATGGACTTGGCCAAGAGGAAGCCGCACCTGATCTTCGGGCCAGGCGCGGCGCCTTAC
GAGCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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