Protein ID | Ophio5|3197 |
Gene name | |
Location | scaffold_253:9779..10436 |
Strand | - |
Gene length (bp) | 657 |
Transcript length (bp) | 306 |
Coding sequence length (bp) | 303 |
Protein length (aa) | 101 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10791 | F1F0-ATPsyn_F | Mitochondrial F1-F0 ATP synthase subunit F of fungi | 3.5E-40 | 4 | 94 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q06405|ATPK_YEAST | ATP synthase subunit f, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATP17 PE=1 SV=1 | 4 | 97 | 2.0E-28 |
sp|O94377|ATPK_SCHPO | ATP synthase subunit f, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atp17 PE=3 SV=1 | 9 | 99 | 1.0E-23 |
GO Term | Description | Terminal node |
---|---|---|
GO:0015986 | proton motive force-driven ATP synthesis | Yes |
GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | Yes |
GO:0009165 | nucleotide biosynthetic process | No |
GO:0006139 | nucleobase-containing compound metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0009145 | purine nucleoside triphosphate biosynthetic process | No |
GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | No |
GO:0006793 | phosphorus metabolic process | No |
GO:0006754 | ATP biosynthetic process | No |
GO:0009201 | ribonucleoside triphosphate biosynthetic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0009987 | cellular process | No |
GO:0009152 | purine ribonucleotide biosynthetic process | No |
GO:1901293 | nucleoside phosphate biosynthetic process | No |
GO:0009142 | nucleoside triphosphate biosynthetic process | No |
GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | No |
GO:1901576 | organic substance biosynthetic process | No |
GO:0055086 | nucleobase-containing small molecule metabolic process | No |
GO:0046483 | heterocycle metabolic process | No |
GO:0044238 | primary metabolic process | No |
GO:0046034 | ATP metabolic process | No |
GO:0006796 | phosphate-containing compound metabolic process | No |
GO:0006164 | purine nucleotide biosynthetic process | No |
GO:0032991 | protein-containing complex | No |
GO:1901566 | organonitrogen compound biosynthetic process | No |
GO:0046390 | ribose phosphate biosynthetic process | No |
GO:0098798 | mitochondrial protein-containing complex | No |
GO:1901564 | organonitrogen compound metabolic process | No |
GO:0018130 | heterocycle biosynthetic process | No |
GO:0006725 | cellular aromatic compound metabolic process | No |
GO:0008150 | biological_process | No |
GO:0044281 | small molecule metabolic process | No |
GO:0072521 | purine-containing compound metabolic process | No |
GO:0009260 | ribonucleotide biosynthetic process | No |
GO:0019438 | aromatic compound biosynthetic process | No |
GO:0009117 | nucleotide metabolic process | No |
GO:0009058 | biosynthetic process | No |
GO:0044249 | cellular biosynthetic process | No |
GO:0098796 | membrane protein complex | No |
GO:0006753 | nucleoside phosphate metabolic process | No |
GO:0034641 | cellular nitrogen compound metabolic process | No |
GO:0090407 | organophosphate biosynthetic process | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0009150 | purine ribonucleotide metabolic process | No |
GO:1901362 | organic cyclic compound biosynthetic process | No |
GO:0009144 | purine nucleoside triphosphate metabolic process | No |
GO:0009141 | nucleoside triphosphate metabolic process | No |
GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | No |
GO:1901135 | carbohydrate derivative metabolic process | No |
GO:0072522 | purine-containing compound biosynthetic process | No |
GO:0006163 | purine nucleotide metabolic process | No |
GO:0019693 | ribose phosphate metabolic process | No |
GO:0009199 | ribonucleoside triphosphate metabolic process | No |
GO:0034654 | nucleobase-containing compound biosynthetic process | No |
GO:0098800 | inner mitochondrial membrane protein complex | No |
GO:1901360 | organic cyclic compound metabolic process | No |
GO:0019637 | organophosphate metabolic process | No |
GO:1901137 | carbohydrate derivative biosynthetic process | No |
GO:0009259 | ribonucleotide metabolic process | No |
GO:0005575 | cellular_component | No |
GO:0044271 | cellular nitrogen compound biosynthetic process | No |
GO:0009205 | purine ribonucleoside triphosphate metabolic process | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Mitochondrial transit peptide | 0.096 | 0.0869 | 0.0156 | 0.0615 | 0.9445 | 0.0381 | 0.1326 | 0.0507 | 0.0627 | 0.0231 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 72 | 91 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 6300 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3197 MSFVTRRALSTLIPPKVASPKAIGGAPDALRMQRVVSFYEKLPRGPAPEIKGKGLLGWYQAKYFGEKTSVKPIIH IIAFLVGIGYAQNYYFHLRHHKNNPH |
Coding | >Ophio5|3197 ATGAGCTTCGTCACCCGTCGAGCGCTTTCGACGCTCATCCCCCCGAAGGTCGCTTCGCCCAAGGCTATCGGCGGC GCTCCCGATGCGTTGCGGATGCAACGCGTCGTCAGCTTCTACGAGAAGCTTCCTCGGGGTCCGGCTCCGGAGATC AAGGGAAAAGGACTGCTCGGCTGGTACCAGGCCAAATACTTTGGCGAGAAGACCTCCGTTAAGCCTATAATTCAT ATTATTGCTTTCCTGGTGGGCATCGGCTATGCGCAAAACTACTACTTCCATTTGCGCCATCACAAGAACAACCCC CAC |
Transcript | >Ophio5|3197 ATGAGCTTCGTCACCCGTCGAGCGCTTTCGACGCTCATCCCCCCGAAGGTCGCTTCGCCCAAGGCTATCGGCGGC GCTCCCGATGCGTTGCGGATGCAACGCGTCGTCAGCTTCTACGAGAAGCTTCCTCGGGGTCCGGCTCCGGAGATC AAGGGAAAAGGACTGCTCGGCTGGTACCAGGCCAAATACTTTGGCGAGAAGACCTCCGTTAAGCCTATAATTCAT ATTATTGCTTTCCTGGTGGGCATCGGCTATGCGCAAAACTACTACTTCCATTTGCGCCATCACAAGAACAACCCC CACTAG |
Gene | >Ophio5|3197 ATGAGCTTCGTCACCCGTCGAGCGCTTTCGACGCTCATCCCCCCGAAGGTAAGGACACCGAACAGCAGCTCCATT GCCAACTATTGACGCTTCTTGCAGGTCGCTTCGCCCAAGGTACATCTTCCTCCCTCGAATTGCGTCGATGTGTGT GGCAAGTCGGTTATGCCGTGCGATGGAGAGAAACTTCGAGTGGCCAGGCGCTGTACCTTTGGTCGGCGACAGACT TTGACCAGCTCGTGAATGGACTCCCGACCGGACGCCGAGCCTACGGGCTAACCCGTGATACTCGCAGGCTATCGG CGGCGCTCCCGATGCGTTGCGGATGCAACGCGTCGTCAGCTTCTACGAGAAGCTTCCTCGGGGTCCGGCTCCGGA GATCAAGGGAAAAGGACTGCTCGGCTGGTACCAGGCCAAATACTTTGGCGAGAAGACCTCCGTTAAGCGTATGCC ACACAATGACGGCGACGTGAGATACTGTTTCGCTGACGGCAGCTCGGGCAGCTATAATTCATATTATTGCTTTCC TGGTGGGCATCGGCTATGCGCAAAACTACTACTTCCATTTGCGTACGTTGCCCCGTCGATGACATTCCATGCTTC GTCCCGGAAGCTAACGGTTATGTTTGCGAAGGCCATCACAAGAACAACCCCCACTAG |