Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3165
Gene name
Locationscaffold_250:2717..3657
Strand+
Gene length (bp)940
Transcript length (bp)798
Coding sequence length (bp)795
Protein length (aa) 265

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3165
MIVNLMLLHAALAAPTFNNTITGHIFFNRSVTLNNTLTFNNTKVNFIQTGNCVQGTPASNDQFDIQYERVRPGAL
REMNGSIIEPGFFNRYAAVGKSVLLSVGNPFTTYAEFRCQFTCNAIPGCASFVGYEKSMPGNFSNFQCQFFNSSI
KPENIIPKPAGSNATLTNAYNKLCQQDLGGALDTEVGQGGFGQSIVGAEQDTGDGQVGDGQLVGNGLDTGAEQGA
GGEQSEGGQDLEGEDLQGVQDLDNEDNSTGPLSDVGQSID
Coding >Ophio5|3165
ATGATTGTCAACTTGATGCTGCTTCATGCGGCGCTCGCAGCTCCCACATTCAACAATACCATCACCGGCCATATC
TTCTTCAATAGGAGCGTCACGCTCAACAACACCCTCACGTTCAACAACACCAAAGTCAACTTTATCCAAACCGGA
AACTGCGTCCAAGGCACGCCAGCGTCGAACGATCAGTTCGACATTCAATATGAACGCGTCCGGCCAGGAGCATTA
AGGGAGATGAACGGGTCAATCATTGAGCCAGGCTTTTTCAACCGCTACGCTGCAGTCGGTAAAAGCGTCCTTCTG
TCGGTGGGCAACCCCTTCACGACGTACGCCGAATTCAGGTGCCAGTTCACCTGCAATGCCATCCCGGGTTGCGCG
TCCTTTGTTGGATATGAGAAGTCTATGCCCGGAAACTTTTCCAACTTTCAATGCCAATTCTTCAATTCCAGCATT
AAACCCGAAAATATAATCCCTAAGCCTGCTGGTTCAAACGCCACCTTGACGAACGCATATAATAAGTTGTGCCAA
CAAGATCTGGGGGGTGCTCTAGACACAGAGGTTGGACAAGGAGGGTTTGGACAGAGTATAGTAGGGGCTGAACAG
GACACAGGGGACGGACAGGTGGGGGATGGGCAGCTTGTAGGTAATGGACTGGACACAGGAGCTGAGCAAGGTGCA
GGGGGAGAGCAGAGTGAGGGCGGTCAGGACCTCGAAGGCGAGGATCTCCAAGGTGTGCAGGACTTGGACAATGAG
GATAATTCGACAGGTCCACTATCCGACGTGGGCCAAAGTATAGAT
Transcript >Ophio5|3165
ATGATTGTCAACTTGATGCTGCTTCATGCGGCGCTCGCAGCTCCCACATTCAACAATACCATCACCGGCCATATC
TTCTTCAATAGGAGCGTCACGCTCAACAACACCCTCACGTTCAACAACACCAAAGTCAACTTTATCCAAACCGGA
AACTGCGTCCAAGGCACGCCAGCGTCGAACGATCAGTTCGACATTCAATATGAACGCGTCCGGCCAGGAGCATTA
AGGGAGATGAACGGGTCAATCATTGAGCCAGGCTTTTTCAACCGCTACGCTGCAGTCGGTAAAAGCGTCCTTCTG
TCGGTGGGCAACCCCTTCACGACGTACGCCGAATTCAGGTGCCAGTTCACCTGCAATGCCATCCCGGGTTGCGCG
TCCTTTGTTGGATATGAGAAGTCTATGCCCGGAAACTTTTCCAACTTTCAATGCCAATTCTTCAATTCCAGCATT
AAACCCGAAAATATAATCCCTAAGCCTGCTGGTTCAAACGCCACCTTGACGAACGCATATAATAAGTTGTGCCAA
CAAGATCTGGGGGGTGCTCTAGACACAGAGGTTGGACAAGGAGGGTTTGGACAGAGTATAGTAGGGGCTGAACAG
GACACAGGGGACGGACAGGTGGGGGATGGGCAGCTTGTAGGTAATGGACTGGACACAGGAGCTGAGCAAGGTGCA
GGGGGAGAGCAGAGTGAGGGCGGTCAGGACCTCGAAGGCGAGGATCTCCAAGGTGTGCAGGACTTGGACAATGAG
GATAATTCGACAGGTCCACTATCCGACGTGGGCCAAAGTATAGATTAA
Gene >Ophio5|3165
ATGATTGTCAACTTGATGCTGCTTCATGCGGCGCTCGCAGCTCCCACATTCAACAATACCATCACCGGCCATATC
TTCTTCAATAGGAGCGTCACGCTCAACAACACCCTCACGTTCAACAACACCAAAGTCAACTTTATCCAAACCGGA
AACTGCGTCCAAGGCACGCCAGCGTCGAACGATCAGTTCGACATTCAATATGAACGCGTCCGGCCAGGAGCATTA
AGGGAGATGAACGGGTCAATCATTGAGCCAGGCTTTTTCAACCGCTACGCTGCAGTCGGTAAAAGCGTCGTAAGT
CGAGGCATTGTGGAAATCGGCGTCCCTGTCTGACAAGTTGCAGCTTCTGTCGGTGGGCAACCCCTTCACGACGTA
CGCCGAATTCAGGTGCCAGTTCACCTGCAATGCCATCCCGGGTTGCGCGTCCTTTGTTGGATATGAGAGTGCGTT
GTTGTCCCTTCGCGACGAAAAGCAGCTCACCATATGCAGAGTCTATGCCCGGAAACTTTTCCAACTTTCAATGCC
AATTCTTCAATTCCAGGTGAGAGACGCCATGGCAATTCTCCACGCTTGGCTGACATATTGCAGCATTAAACCCGA
AAATATAATCCCTAAGCCTGCTGGTTCAAACGCCACCTTGACGAACGCATATAATAAGTTGTGCCAACAAGATCT
GGGGGGTGCTCTAGACACAGAGGTTGGACAAGGAGGGTTTGGACAGAGTATAGTAGGGGCTGAACAGGACACAGG
GGACGGACAGGTGGGGGATGGGCAGCTTGTAGGTAATGGACTGGACACAGGAGCTGAGCAAGGTGCAGGGGGAGA
GCAGAGTGAGGGCGGTCAGGACCTCGAAGGCGAGGATCTCCAAGGTGTGCAGGACTTGGACAATGAGGATAATTC
GACAGGTCCACTATCCGACGTGGGCCAAAGTATAGATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail