Protein ID | Ophio5|3141 |
Gene name | |
Location | scaffold_25:25433..28539 |
Strand | - |
Gene length (bp) | 3106 |
Transcript length (bp) | 2799 |
Coding sequence length (bp) | 2796 |
Protein length (aa) | 932 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00621 | RhoGEF | RhoGEF domain | 3.4E-21 | 236 | 482 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q69ZK0|PREX1_MOUSE | Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein OS=Mus musculus GN=Prex1 PE=1 SV=2 | 227 | 482 | 2.0E-07 |
sp|Q8TCU6|PREX1_HUMAN | Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein OS=Homo sapiens GN=PREX1 PE=1 SV=3 | 227 | 482 | 3.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005085 | guanyl-nucleotide exchange factor activity | Yes |
GO:0060589 | nucleoside-triphosphatase regulator activity | No |
GO:0003674 | molecular_function | No |
GO:0030234 | enzyme regulator activity | No |
GO:0098772 | molecular function regulator activity | No |
GO:0030695 | GTPase regulator activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 43 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3141 MSVNSPEPSSLPGSRRCSVGDESEDEQDVACEDHNQPANIDQDAATSELDKLHIQGIETLDTSRSIENIGDTLRA PGNPVSPLPLASVEENSENPAQGSPRGSESRPVRPFHKWVRSFHRKARRRPSVLAANSEPLSRGQAEDVLPSPPM SRMSSSSDSSFRFVAAVRSASVSLASASIVTRSRRNTALSRCMSRTERSSRASASVPRASEESAILDKTDVVDLA ATERSMQRRRILEELISTEEGYIGDVRFLMNVYVTILASLPAMCMGLRSSINKNLTDIVELHEEILGELHRAVPH SEYTQPQAPSGSYSMANWAAAETPPGHHRWASVDGALERRRRVSWLQKTPGMLADPQVVAEVSKIFAKKMNRFFI YKEYGAKYELMIKDVASANQAMPQWETYQKGLETLASILGCAKNAPDQCKKALKMGDLLVKPIQRICRYPLLFAE LLKYTPVSDCPNSHMEVDSVLMRLREANSEINRATDDSTIKATLERTWILQDRLVFPHRKLDSASKNRLRSFGHI RLCGTLHVCWQSHRGVDGQYLICLLYRDVLCLASAGKADPLYMIQACVNLNRASVEDVDNGRGLQCHTAPFSWKL VFECDHQLYEMIMTACTPKEEMEWRTRLSRRAKDGSEPREPSVFSSLDLDIKSLGTVFGKPGTIARRISIHRATT VGPKSPLCQVVLKNTSVVRDTGNSASAALTINRSQSVLTTQARMPVLAPSRSERARLEALLADVWTRETLPFPGM TTRARSEHLVRTSASTVMRKLSVTSIASSFARRSSSLTQKAKTCDEPSGRGDVKRRGFKSSTDELWADGKSADAE TLRRLKRPRTGHVLAADETKPESSPVNISGAARVAIPVGGQGAVSTLRTSSANSQRVVRGKKSGSQHADKENKCG RAGDEVWSPGRKGKVAGGKTDEGSIGLKSYFR |
Coding | >Ophio5|3141 ATGTCCGTCAACTCACCCGAACCGTCTTCTTTACCCGGATCTCGACGATGCAGCGTAGGAGACGAATCGGAAGAT GAGCAAGACGTCGCTTGTGAAGACCACAACCAGCCGGCCAACATCGATCAGGACGCTGCCACCTCGGAACTCGAC AAGCTGCACATTCAAGGCATCGAGACTCTCGACACATCGCGCAGCATCGAGAACATCGGTGACACGCTCCGGGCG CCCGGGAATCCTGTTTCCCCTCTGCCTCTCGCATCCGTCGAGGAGAACTCGGAAAATCCAGCTCAAGGTTCCCCG CGAGGCAGCGAGTCTCGCCCTGTCCGGCCCTTTCACAAATGGGTTCGATCCTTCCACCGAAAAGCGAGACGCCGG CCCTCCGTGTTGGCAGCCAACAGTGAACCTCTGTCTCGAGGGCAGGCAGAGGACGTCTTGCCAAGTCCGCCGATG AGTCGAATGTCCTCATCCTCCGACTCGTCCTTTAGGTTTGTCGCGGCTGTCCGAAGCGCTAGTGTCAGCCTCGCC AGCGCCAGCATCGTGACGCGATCCAGGAGGAACACGGCGCTCTCGCGGTGCATGTCCCGAACGGAGCGCAGCAGT AGGGCCTCTGCTTCGGTACCCAGAGCGTCGGAAGAGAGTGCCATACTTGACAAGACGGACGTGGTTGACCTTGCC GCCACAGAGCGTTCCATGCAGCGACGACGCATCCTAGAGGAGCTCATCAGCACCGAAGAGGGCTATATCGGTGAT GTGCGCTTTCTCATGAACGTCTATGTCACTATTCTCGCCTCTCTCCCGGCCATGTGCATGGGTCTGCGGTCTTCT ATCAATAAGAATTTGACCGACATTGTCGAGCTGCACGAGGAGATTCTAGGTGAGCTACACCGAGCGGTGCCTCAT TCCGAATACACACAGCCTCAGGCGCCGTCGGGGTCTTACAGCATGGCAAACTGGGCCGCGGCCGAGACGCCTCCT GGCCACCATCGATGGGCCAGCGTCGATGGAGCTCTTGAGCGCCGCAGACGCGTGAGCTGGTTGCAGAAGACTCCC GGCATGCTAGCCGACCCGCAGGTCGTGGCAGAAGTGTCCAAGATCTTTGCCAAAAAGATGAACCGGTTCTTCATA TATAAGGAGTATGGAGCAAAGTATGAGTTGATGATCAAGGACGTTGCGTCGGCCAACCAGGCCATGCCGCAGTGG GAGACATACCAAAAGGGCCTGGAGACGCTTGCGTCCATTCTCGGCTGCGCAAAGAATGCCCCAGACCAATGCAAA AAGGCGCTCAAGATGGGGGATCTACTCGTCAAGCCCATTCAGAGGATCTGCAGATATCCGCTTCTCTTTGCAGAG CTCCTCAAGTACACGCCCGTGTCGGATTGCCCCAACTCCCATATGGAGGTTGACAGCGTTTTGATGAGGCTGCGG GAGGCCAATTCTGAGATCAATCGAGCTACCGACGATTCGACCATCAAAGCCACGCTGGAGAGGACTTGGATTTTA CAAGACCGACTGGTGTTCCCCCACAGGAAACTCGACTCAGCGTCCAAGAACCGGTTGCGCTCCTTCGGCCACATC CGCCTCTGCGGCACGCTGCACGTCTGCTGGCAATCGCACAGAGGAGTGGACGGGCAGTACTTGATCTGCCTCCTC TACCGCGACGTCCTGTGCCTCGCCTCGGCCGGCAAGGCAGATCCACTATACATGATCCAGGCCTGTGTCAACTTG AACAGAGCCAGCGTTGAGGACGTCGACAACGGGCGAGGTCTTCAGTGCCATACGGCGCCCTTTTCCTGGAAGCTG GTGTTTGAATGTGATCATCAGCTGTACGAGATGATCATGACGGCCTGCACGCCCAAGGAGGAGATGGAATGGCGA ACAAGGCTTAGCCGTCGGGCCAAGGACGGCTCCGAGCCAAGGGAGCCCAGCGTCTTTAGCTCTCTAGATCTGGAC ATCAAGAGTCTCGGCACCGTGTTTGGGAAGCCAGGGACCATTGCTCGGCGCATCTCGATACACCGAGCGACGACG GTGGGGCCGAAATCACCCCTGTGCCAAGTCGTGCTCAAGAACACGAGCGTCGTCCGGGACACGGGCAACAGCGCC TCGGCAGCACTGACCATCAATCGGTCTCAGTCTGTGCTCACGACGCAGGCGCGGATGCCTGTGCTCGCGCCGTCG CGTAGCGAGCGGGCACGATTGGAGGCGTTGCTGGCCGACGTTTGGACGCGAGAGACCTTGCCCTTCCCCGGTATG ACGACGCGGGCGCGGAGCGAGCACCTCGTCCGGACGTCGGCATCGACGGTGATGAGAAAGCTCAGTGTTACAAGC ATCGCCAGCTCTTTCGCTCGAAGATCCAGCAGCCTCACGCAGAAAGCGAAGACGTGCGATGAGCCGTCGGGAAGA GGGGACGTCAAGCGCCGGGGCTTCAAGAGCTCGACGGACGAGCTCTGGGCGGACGGCAAGAGTGCGGACGCGGAA ACGCTTCGCAGATTGAAGAGGCCTCGGACAGGTCATGTGCTGGCTGCCGACGAGACAAAACCAGAGTCATCCCCG GTGAATATTTCTGGCGCAGCAAGGGTCGCCATACCAGTAGGAGGACAAGGCGCAGTCAGTACGCTGCGGACGTCG TCGGCCAATAGCCAGCGAGTTGTCCGAGGCAAAAAGTCTGGCTCACAGCACGCGGACAAGGAGAACAAGTGCGGA AGAGCCGGCGACGAGGTTTGGAGCCCGGGGCGGAAGGGAAAAGTCGCCGGCGGCAAGACGGACGAGGGCAGCATC GGGCTGAAGAGCTATTTTCGA |
Transcript | >Ophio5|3141 ATGTCCGTCAACTCACCCGAACCGTCTTCTTTACCCGGATCTCGACGATGCAGCGTAGGAGACGAATCGGAAGAT GAGCAAGACGTCGCTTGTGAAGACCACAACCAGCCGGCCAACATCGATCAGGACGCTGCCACCTCGGAACTCGAC AAGCTGCACATTCAAGGCATCGAGACTCTCGACACATCGCGCAGCATCGAGAACATCGGTGACACGCTCCGGGCG CCCGGGAATCCTGTTTCCCCTCTGCCTCTCGCATCCGTCGAGGAGAACTCGGAAAATCCAGCTCAAGGTTCCCCG CGAGGCAGCGAGTCTCGCCCTGTCCGGCCCTTTCACAAATGGGTTCGATCCTTCCACCGAAAAGCGAGACGCCGG CCCTCCGTGTTGGCAGCCAACAGTGAACCTCTGTCTCGAGGGCAGGCAGAGGACGTCTTGCCAAGTCCGCCGATG AGTCGAATGTCCTCATCCTCCGACTCGTCCTTTAGGTTTGTCGCGGCTGTCCGAAGCGCTAGTGTCAGCCTCGCC AGCGCCAGCATCGTGACGCGATCCAGGAGGAACACGGCGCTCTCGCGGTGCATGTCCCGAACGGAGCGCAGCAGT AGGGCCTCTGCTTCGGTACCCAGAGCGTCGGAAGAGAGTGCCATACTTGACAAGACGGACGTGGTTGACCTTGCC GCCACAGAGCGTTCCATGCAGCGACGACGCATCCTAGAGGAGCTCATCAGCACCGAAGAGGGCTATATCGGTGAT GTGCGCTTTCTCATGAACGTCTATGTCACTATTCTCGCCTCTCTCCCGGCCATGTGCATGGGTCTGCGGTCTTCT ATCAATAAGAATTTGACCGACATTGTCGAGCTGCACGAGGAGATTCTAGGTGAGCTACACCGAGCGGTGCCTCAT TCCGAATACACACAGCCTCAGGCGCCGTCGGGGTCTTACAGCATGGCAAACTGGGCCGCGGCCGAGACGCCTCCT GGCCACCATCGATGGGCCAGCGTCGATGGAGCTCTTGAGCGCCGCAGACGCGTGAGCTGGTTGCAGAAGACTCCC GGCATGCTAGCCGACCCGCAGGTCGTGGCAGAAGTGTCCAAGATCTTTGCCAAAAAGATGAACCGGTTCTTCATA TATAAGGAGTATGGAGCAAAGTATGAGTTGATGATCAAGGACGTTGCGTCGGCCAACCAGGCCATGCCGCAGTGG GAGACATACCAAAAGGGCCTGGAGACGCTTGCGTCCATTCTCGGCTGCGCAAAGAATGCCCCAGACCAATGCAAA AAGGCGCTCAAGATGGGGGATCTACTCGTCAAGCCCATTCAGAGGATCTGCAGATATCCGCTTCTCTTTGCAGAG CTCCTCAAGTACACGCCCGTGTCGGATTGCCCCAACTCCCATATGGAGGTTGACAGCGTTTTGATGAGGCTGCGG GAGGCCAATTCTGAGATCAATCGAGCTACCGACGATTCGACCATCAAAGCCACGCTGGAGAGGACTTGGATTTTA CAAGACCGACTGGTGTTCCCCCACAGGAAACTCGACTCAGCGTCCAAGAACCGGTTGCGCTCCTTCGGCCACATC CGCCTCTGCGGCACGCTGCACGTCTGCTGGCAATCGCACAGAGGAGTGGACGGGCAGTACTTGATCTGCCTCCTC TACCGCGACGTCCTGTGCCTCGCCTCGGCCGGCAAGGCAGATCCACTATACATGATCCAGGCCTGTGTCAACTTG AACAGAGCCAGCGTTGAGGACGTCGACAACGGGCGAGGTCTTCAGTGCCATACGGCGCCCTTTTCCTGGAAGCTG GTGTTTGAATGTGATCATCAGCTGTACGAGATGATCATGACGGCCTGCACGCCCAAGGAGGAGATGGAATGGCGA ACAAGGCTTAGCCGTCGGGCCAAGGACGGCTCCGAGCCAAGGGAGCCCAGCGTCTTTAGCTCTCTAGATCTGGAC ATCAAGAGTCTCGGCACCGTGTTTGGGAAGCCAGGGACCATTGCTCGGCGCATCTCGATACACCGAGCGACGACG GTGGGGCCGAAATCACCCCTGTGCCAAGTCGTGCTCAAGAACACGAGCGTCGTCCGGGACACGGGCAACAGCGCC TCGGCAGCACTGACCATCAATCGGTCTCAGTCTGTGCTCACGACGCAGGCGCGGATGCCTGTGCTCGCGCCGTCG CGTAGCGAGCGGGCACGATTGGAGGCGTTGCTGGCCGACGTTTGGACGCGAGAGACCTTGCCCTTCCCCGGTATG ACGACGCGGGCGCGGAGCGAGCACCTCGTCCGGACGTCGGCATCGACGGTGATGAGAAAGCTCAGTGTTACAAGC ATCGCCAGCTCTTTCGCTCGAAGATCCAGCAGCCTCACGCAGAAAGCGAAGACGTGCGATGAGCCGTCGGGAAGA GGGGACGTCAAGCGCCGGGGCTTCAAGAGCTCGACGGACGAGCTCTGGGCGGACGGCAAGAGTGCGGACGCGGAA ACGCTTCGCAGATTGAAGAGGCCTCGGACAGGTCATGTGCTGGCTGCCGACGAGACAAAACCAGAGTCATCCCCG GTGAATATTTCTGGCGCAGCAAGGGTCGCCATACCAGTAGGAGGACAAGGCGCAGTCAGTACGCTGCGGACGTCG TCGGCCAATAGCCAGCGAGTTGTCCGAGGCAAAAAGTCTGGCTCACAGCACGCGGACAAGGAGAACAAGTGCGGA AGAGCCGGCGACGAGGTTTGGAGCCCGGGGCGGAAGGGAAAAGTCGCCGGCGGCAAGACGGACGAGGGCAGCATC GGGCTGAAGAGCTATTTTCGATAG |
Gene | >Ophio5|3141 ATGTCCGTCAACTCACCCGAACCGTCTTCTTTACCCGGATCTCGACGATGCAGCGTAGGAGACGAATCGGAAGAT GAGCAAGACGTCGCTTGTGAAGACCACAACCAGCCGGCCAACATCGATCAGGACGCTGCCACCTCGGAACTCGAC AAGCTGCACATTCAAGGCATCGAGACTCTCGACACATCGCGCAGCATCGAGAACATCGGTGACACGCTCCGGGCG CCCGGGAATCCTGTTTCCCCTCTGCCTCTCGCATCCGTCGAGGAGAACTCGGAAAATCCAGCTCAAGGTTCCCCG CGAGGCAGCGAGTCTCGCCCTGTCCGGCCCTTTCACAAATGGGTTCGATCCTTCCACCGAAAAGCGAGACGCCGG CCCTCCGTGTTGGCAGCCAACAGTGAACCTCTGTCTCGAGGGCAGGCAGAGGACGTCTTGCCAAGTCCGCCGATG AGTCGAATGTCCTCATCCTCCGACTCGTCCTTTAGGTTTGTCGCGGCTGTCCGAAGCGCTAGTGTCAGCCTCGCC AGCGCCAGCATCGTGACGCGATCCAGGAGGAACACGGCGCTCTCGCGGTGCATGTCCCGAACGGAGCGCAGCAGT AGGGCCTCTGCTTCGGTACCCAGAGCGTCGGAAGAGAGTGCCATACTTGACAAGACGGACGTGGTTGACCTTGCC GCCACAGAGCGTTCCATGCAGCGACGACGCATCCTAGAGGAGCTCATCAGCACCGAAGAGGGCTATATCGGTGAT GTGCGCTTTCTCATGAACGTAAGTCACCAAGCGATTCGCTGCCATGTGAGGATTGCTCACCGTCGTCTAGGTCTA TGTCACTATTCTCGCCTCTCTCCCGGCCATGTGCATGGGTCTGCGGTCTTCTATCAATAAGAATTTGACCGACAT TGTCGAGCTGCACGAGGAGATTCTAGGTGAGCTACACCGAGCGGTGCCTCATTCCGAATACACACAGCCTCAGGC GCCGTCGGGGTCTTACAGCATGGCAAACTGGGCCGCGGCCGAGACGCCTCCTGGCCACCATCGATGGGCCAGCGT CGATGGAGCTCTTGAGCGCCGCAGACGCGTGAGCTGGTTGCAGAAGACTCCCGGCATGCTAGCCGACCCGCAGGT CGTGGCAGAAGTGTCCAAGATCTTTGCCAAAAAGGTAGCATGTGCTATACCCCCTTGATTGCCGCAAGTGTTAAC ATGACACCAGATGAACCGGTTCTTCATATATAAGGAGTATGGAGCAAAGTATGAGTTGATGATCAAGGACGTTGC GTCGGCCAACCAGGCCATGCCGCAGTGGGAGACATACCAAAAGGGCCTGGAGACGCTTGCGTCCATTCTCGGCTG CGCAAAGAATGCCCCAGACCAATGCAAAAAGGCGCTCAAGATGGGGGATCTACTCGTCAAGGTAAATTGCGCAGA AACTCGTCGACTCACTTTACTAACCGGACGTGGCAGCCCATTCAGAGGATCTGCAGATATCCGCTTCTCTTTGCA GAGCTCCTCAAGTACACGCCCGTGTCGGATTGCCCCAACTCCCATATGGAGGTTGACAGCGTTTTGATGAGGCTG CGGGAGGCCAATTCTGAGATCAATCGAGCTACCGACGATTCGACCATCAAAGCCACGCTGGAGAGGACTTGGATT TTACAAGACCGACTGGTGTTCCCCCACAGGGTATGTGCTCCGTCATCTCCCCACGACTGGATGGTAACTCGAACC TCGATTGCAGAAACTCGACTCAGCGTCCAAGAACCGGTTGCGCTCCTTCGGCCACATCCGCCTCTGCGGCACGCT GCACGTCTGCTGGCAATCGCACAGAGGAGTGGACGGGCAGTACTTGATCTGCCTCCTCTACCGCGACGTCCTGTG CCTCGCCTCGGCCGGCAAGGCAGATCCACTATACATGATCCAGGCCTGTGTCAACTTGAACAGAGCCAGCGTTGA GGACGTCGACAACGGGCGAGGTGAGTTACAGCATCTCCGTTGGGCGTCGATGACATGCTTATAGAGGAACAGGTC TTCAGTGCCATACGGCGCCCTTTTCCTGGAAGCTGGTGTTTGAATGTGATCATCAGCTGTACGAGATGATCATGA CGGCCTGCACGCCCAAGGAGGAGATGGAATGGCGAACAAGGCTTAGCCGTCGGGCCAAGGACGGCTCCGAGCCAA GGGAGCCCAGCGTCTTTAGCTCTCTAGATCTGGACATCAAGAGTCTCGGCACCGTGTTTGGGAAGCCAGGTCAGT TACCCCGGGCCAAGTGAGGAGCTTCATCTGACACGCCACAGGGACCATTGCTCGGCGCATCTCGATACACCGAGC GACGACGGTGGGGCCGAAATCACCCCTGTGCCAAGTCGTGCTCAAGAACACGAGCGTCGTCCGGGACACGGGCAA CAGCGCCTCGGCAGCACTGACCATCAATCGGTCTCAGTCTGTGCTCACGACGCAGGCGCGGATGCCTGTGCTCGC GCCGTCGCGTAGCGAGCGGGCACGATTGGAGGCGTTGCTGGCCGACGTTTGGACGCGAGAGACCTTGCCCTTCCC CGGTATGACGACGCGGGCGCGGAGCGAGCACCTCGTCCGGACGTCGGCATCGACGGTGATGAGAAAGCTCAGTGT TACAAGCATCGCCAGCTCTTTCGCTCGAAGATCCAGCAGCCTCACGCAGAAAGCGAAGACGTGCGATGAGCCGTC GGGAAGAGGGGACGTCAAGCGCCGGGGCTTCAAGAGCTCGACGGACGAGCTCTGGGCGGACGGCAAGAGTGCGGA CGCGGAAACGCTTCGCAGATTGAAGAGGCCTCGGACAGGTCATGTGCTGGCTGCCGACGAGACAAAACCAGAGTC ATCCCCGGTGAATATTTCTGGCGCAGCAAGGGTCGCCATACCAGTAGGAGGACAAGGCGCAGTCAGTACGCTGCG GACGTCGTCGGCCAATAGCCAGCGAGTTGTCCGAGGCAAAAAGTCTGGCTCACAGCACGCGGACAAGGAGAACAA GTGCGGAAGAGCCGGCGACGAGGTTTGGAGCCCGGGGCGGAAGGGAAAAGTCGCCGGCGGCAAGACGGACGAGGG CAGCATCGGGCTGAAGAGCTATTTTCGATAG |