Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3139
Gene name
Locationscaffold_25:22449..23067
Strand+
Gene length (bp)618
Transcript length (bp)438
Coding sequence length (bp)435
Protein length (aa) 145

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22
2 49 71 22
3 83 102 19
4 107 129 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3139
MGKLIKNHWARLLVLTCALYQIGAAIEGFFWPQIFWDFLTSALNPAVKPIPILQIINLVFGIALIALEWPVPFIA
HTGIHRSIVFRLIVLPLAALAAILMYQSFDDAIYYMIAMAAYFWAYSEGEVICAKPWTLPQRDMRSAEKM
Coding >Ophio5|3139
ATGGGAAAGCTCATCAAGAACCACTGGGCTCGTCTCCTCGTCCTGACGTGCGCGCTCTATCAAATCGGCGCTGCC
ATCGAGGGCTTCTTCTGGCCCCAGATATTCTGGGATTTCCTCACCTCGGCCCTCAACCCGGCCGTCAAGCCCATC
CCCATCCTACAAATCATCAACCTCGTCTTCGGCATCGCCCTCATCGCTCTCGAGTGGCCCGTGCCCTTCATCGCA
CACACCGGTATTCACCGCTCCATCGTCTTCCGACTCATCGTTCTGCCGCTCGCCGCCCTTGCCGCCATTCTCATG
TACCAGTCTTTCGACGACGCCATCTACTACATGATCGCCATGGCTGCCTACTTTTGGGCCTATAGCGAGGGCGAG
GTTATTTGCGCCAAGCCCTGGACACTACCGCAACGCGACATGCGGTCTGCGGAGAAGATG
Transcript >Ophio5|3139
ATGGGAAAGCTCATCAAGAACCACTGGGCTCGTCTCCTCGTCCTGACGTGCGCGCTCTATCAAATCGGCGCTGCC
ATCGAGGGCTTCTTCTGGCCCCAGATATTCTGGGATTTCCTCACCTCGGCCCTCAACCCGGCCGTCAAGCCCATC
CCCATCCTACAAATCATCAACCTCGTCTTCGGCATCGCCCTCATCGCTCTCGAGTGGCCCGTGCCCTTCATCGCA
CACACCGGTATTCACCGCTCCATCGTCTTCCGACTCATCGTTCTGCCGCTCGCCGCCCTTGCCGCCATTCTCATG
TACCAGTCTTTCGACGACGCCATCTACTACATGATCGCCATGGCTGCCTACTTTTGGGCCTATAGCGAGGGCGAG
GTTATTTGCGCCAAGCCCTGGACACTACCGCAACGCGACATGCGGTCTGCGGAGAAGATGTGA
Gene >Ophio5|3139
ATGGGAAAGCTCATCAAGAACCACTGGGCTCGTCTCCTCGTCCTGACGTGCGCGCTCTGTACGCTCTCTCCCGGG
TCCGACTCCTCTGCCATGCCCGAATGCTAACGAGGCTTGTATAGATCAAATCGGCGCTGCCATCGAGGGCTTCTT
CTGGCCCCAGATATTCTGGGATTTCCTCACCTCGGCCCTCAACCCGGCCGTCAAGCCCATCCCCATCCTACAAAT
CATCAACCTCGTCTTCGGCATCGCCCTCATCGCTCTCGAGTGGCCCGTGCCCTTCATCGCACACACCGGTATTCA
CCGCTCCATCGTCTTCCGACTCATCGTTCTGCCGCTCGCCGCCCTTGCCGCCATTCTCATGTACCAGTCTTTCGA
CGACGCCATCTACTACATGATCGCCATGGCTGCCTACTTTTGGGCCTATAGCGAGGGCGAGGTTCGTCTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCTTTTTGTTTTTCTTTCCCCTTTTACCGACTTCTG
TGAGCTTGAGTCTTAACACGGCCGTGTCAGGTTATTTGCGCCAAGCCCTGGACACTACCGCAACGCGACATGCGG
TCTGCGGAGAAGATGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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