Protein ID | Ophio5|3099 |
Gene name | |
Location | scaffold_247:3971..5072 |
Strand | + |
Gene length (bp) | 1101 |
Transcript length (bp) | 1101 |
Coding sequence length (bp) | 1098 |
Protein length (aa) | 366 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04488 | Gly_transf_sug | Glycosyltransferase sugar-binding region containing DXD motif | 1.0E-08 | 132 | 202 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Golgi apparatus | Signal peptide|Transmembrane domain | 0.1685 | 0.1631 | 0.2936 | 0.2226 | 0.108 | 0.0166 | 0.5598 | 0.1253 | 0.7589 | 0.0115 |
Orthofinder run ID | 4 |
Orthogroup | 201 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3099 MGPLLRICLMMSIALSLWHVFPGFLRLGDYVSQNNRFSGQRAVEQDFTPTSKELACLHGLPLSSETEETAEEWPI PNIVNFIFFQKVPASGPEGDFGFLNYLAVRSAIISLKPERVYIHYGFPAASPAWISVVSDATDVESAITNNPWIR RLRPHVELKRYNKPLDSLLRHKEHLADRIRLEILLENGGIYMDTDAYALRPFGKALTPPSPHDAVLGYEGGNRGG MCNAVIAARSNSSFIRRWLDTYENADLNHEWNYHSVIIPKQLAVNHPNEICELPPDAFFWPTWTWGDVRWMHEPL SKSEANYWRGRIQELGGSLFPNQLVYHAWSQMSRQRYLKRLTPNIIRREDTRFNLLVRRFLEDDND |
Coding | >Ophio5|3099 ATGGGTCCTTTGCTTCGCATCTGCCTCATGATGAGCATTGCTCTCTCCCTTTGGCACGTCTTTCCGGGATTCTTG CGACTCGGTGACTACGTCTCACAGAACAATCGGTTTTCTGGCCAAAGAGCTGTCGAGCAAGACTTTACACCTACC AGCAAGGAACTCGCCTGCCTTCATGGCCTGCCCCTTTCTTCCGAGACGGAAGAGACGGCCGAGGAGTGGCCGATA CCCAACATTGTCAACTTCATCTTCTTCCAAAAGGTTCCCGCCAGCGGACCTGAGGGAGACTTTGGCTTTCTCAAC TACCTCGCCGTCCGCAGCGCTATAATCTCCCTGAAACCCGAACGGGTTTACATTCATTACGGCTTTCCGGCTGCG TCGCCCGCATGGATCAGCGTGGTCAGTGATGCGACGGACGTCGAAAGCGCCATCACCAACAATCCCTGGATCCGT CGGCTGAGGCCTCATGTCGAACTCAAGCGGTATAACAAGCCTCTTGATTCCCTCCTTAGGCACAAAGAGCACTTG GCCGATCGAATTCGGCTCGAAATCTTACTCGAAAATGGAGGCATCTATATGGATACAGATGCCTACGCGCTTCGA CCGTTTGGAAAAGCTCTCACGCCCCCTTCGCCGCACGATGCTGTTCTCGGATACGAAGGCGGTAATCGTGGCGGC ATGTGCAACGCCGTAATTGCTGCTCGATCCAACAGCTCCTTTATCCGTCGCTGGCTGGACACGTACGAGAATGCC GATCTCAACCACGAGTGGAATTACCACAGTGTCATTATTCCGAAGCAGCTCGCCGTCAATCACCCAAACGAGATT TGCGAGCTGCCTCCAGATGCCTTCTTCTGGCCTACCTGGACCTGGGGGGATGTACGATGGATGCATGAGCCTCTG AGTAAGAGCGAAGCCAACTACTGGAGAGGACGCATACAGGAGCTGGGCGGCAGCTTGTTCCCCAATCAGCTCGTC TATCATGCCTGGAGCCAGATGAGCAGGCAGCGATACCTGAAGCGCCTCACACCCAACATCATACGCAGGGAGGAC ACCAGGTTTAACCTCCTCGTGCGACGCTTCTTGGAGGACGACAACGAT |
Transcript | >Ophio5|3099 ATGGGTCCTTTGCTTCGCATCTGCCTCATGATGAGCATTGCTCTCTCCCTTTGGCACGTCTTTCCGGGATTCTTG CGACTCGGTGACTACGTCTCACAGAACAATCGGTTTTCTGGCCAAAGAGCTGTCGAGCAAGACTTTACACCTACC AGCAAGGAACTCGCCTGCCTTCATGGCCTGCCCCTTTCTTCCGAGACGGAAGAGACGGCCGAGGAGTGGCCGATA CCCAACATTGTCAACTTCATCTTCTTCCAAAAGGTTCCCGCCAGCGGACCTGAGGGAGACTTTGGCTTTCTCAAC TACCTCGCCGTCCGCAGCGCTATAATCTCCCTGAAACCCGAACGGGTTTACATTCATTACGGCTTTCCGGCTGCG TCGCCCGCATGGATCAGCGTGGTCAGTGATGCGACGGACGTCGAAAGCGCCATCACCAACAATCCCTGGATCCGT CGGCTGAGGCCTCATGTCGAACTCAAGCGGTATAACAAGCCTCTTGATTCCCTCCTTAGGCACAAAGAGCACTTG GCCGATCGAATTCGGCTCGAAATCTTACTCGAAAATGGAGGCATCTATATGGATACAGATGCCTACGCGCTTCGA CCGTTTGGAAAAGCTCTCACGCCCCCTTCGCCGCACGATGCTGTTCTCGGATACGAAGGCGGTAATCGTGGCGGC ATGTGCAACGCCGTAATTGCTGCTCGATCCAACAGCTCCTTTATCCGTCGCTGGCTGGACACGTACGAGAATGCC GATCTCAACCACGAGTGGAATTACCACAGTGTCATTATTCCGAAGCAGCTCGCCGTCAATCACCCAAACGAGATT TGCGAGCTGCCTCCAGATGCCTTCTTCTGGCCTACCTGGACCTGGGGGGATGTACGATGGATGCATGAGCCTCTG AGTAAGAGCGAAGCCAACTACTGGAGAGGACGCATACAGGAGCTGGGCGGCAGCTTGTTCCCCAATCAGCTCGTC TATCATGCCTGGAGCCAGATGAGCAGGCAGCGATACCTGAAGCGCCTCACACCCAACATCATACGCAGGGAGGAC ACCAGGTTTAACCTCCTCGTGCGACGCTTCTTGGAGGACGACAACGATTAA |
Gene | >Ophio5|3099 ATGGGTCCTTTGCTTCGCATCTGCCTCATGATGAGCATTGCTCTCTCCCTTTGGCACGTCTTTCCGGGATTCTTG CGACTCGGTGACTACGTCTCACAGAACAATCGGTTTTCTGGCCAAAGAGCTGTCGAGCAAGACTTTACACCTACC AGCAAGGAACTCGCCTGCCTTCATGGCCTGCCCCTTTCTTCCGAGACGGAAGAGACGGCCGAGGAGTGGCCGATA CCCAACATTGTCAACTTCATCTTCTTCCAAAAGGTTCCCGCCAGCGGACCTGAGGGAGACTTTGGCTTTCTCAAC TACCTCGCCGTCCGCAGCGCTATAATCTCCCTGAAACCCGAACGGGTTTACATTCATTACGGCTTTCCGGCTGCG TCGCCCGCATGGATCAGCGTGGTCAGTGATGCGACGGACGTCGAAAGCGCCATCACCAACAATCCCTGGATCCGT CGGCTGAGGCCTCATGTCGAACTCAAGCGGTATAACAAGCCTCTTGATTCCCTCCTTAGGCACAAAGAGCACTTG GCCGATCGAATTCGGCTCGAAATCTTACTCGAAAATGGAGGCATCTATATGGATACAGATGCCTACGCGCTTCGA CCGTTTGGAAAAGCTCTCACGCCCCCTTCGCCGCACGATGCTGTTCTCGGATACGAAGGCGGTAATCGTGGCGGC ATGTGCAACGCCGTAATTGCTGCTCGATCCAACAGCTCCTTTATCCGTCGCTGGCTGGACACGTACGAGAATGCC GATCTCAACCACGAGTGGAATTACCACAGTGTCATTATTCCGAAGCAGCTCGCCGTCAATCACCCAAACGAGATT TGCGAGCTGCCTCCAGATGCCTTCTTCTGGCCTACCTGGACCTGGGGGGATGTACGATGGATGCATGAGCCTCTG AGTAAGAGCGAAGCCAACTACTGGAGAGGACGCATACAGGAGCTGGGCGGCAGCTTGTTCCCCAATCAGCTCGTC TATCATGCCTGGAGCCAGATGAGCAGGCAGCGATACCTGAAGCGCCTCACACCCAACATCATACGCAGGGAGGAC ACCAGGTTTAACCTCCTCGTGCGACGCTTCTTGGAGGACGACAACGATTAA |