Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	Ophio5|3096
Gene name
Location	scaffold_246:22994..25502
Strand	+
Gene length (bp)	2508
Transcript length (bp)	2319
Coding sequence length (bp)	2316
Protein length (aa)	772

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	3.0E-37	303	769
PF17807	zf-UBP_var	Variant UBP zinc finger	4.6E-22	16	79
PF02148	zf-UBP	Zn-finger in ubiquitin-hydrolases and other protein	5.9E-20	176	248
PF00627	UBA	UBA/TS-N domain	2.2E-11	584	621
PF00627	UBA	UBA/TS-N domain	1.9E-05	643	678
PF13423	UCH_1	Ubiquitin carboxyl-terminal hydrolase	7.5E-14	431	751

Swissprot hits

GO

GO Term	Description	Terminal node
GO:0008270	zinc ion binding	Yes
GO:0004843	cysteine-type deubiquitinase activity	Yes
GO:0016579	protein deubiquitination	Yes
GO:0071704	organic substance metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0008150	biological_process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0044238	primary metabolic process	No
GO:0006508	proteolysis	No
GO:0046872	metal ion binding	No
GO:0101005	deubiquitinase activity	No
GO:0043412	macromolecule modification	No
GO:0043167	ion binding	No
GO:0043169	cation binding	No
GO:0008152	metabolic process	No
GO:0003674	molecular_function	No
GO:0008233	peptidase activity	No
GO:0070646	protein modification by small protein removal	No
GO:0140096	catalytic activity, acting on a protein	No
GO:0005488	binding	No
GO:0016787	hydrolase activity	No
GO:0070647	protein modification by small protein conjugation or removal	No
GO:0019538	protein metabolic process	No
GO:0036211	protein modification process	No
GO:0046914	transition metal ion binding	No
GO:0006807	nitrogen compound metabolic process	No
GO:0019783	ubiquitin-like protein peptidase activity	No
GO:0003824	catalytic activity	No
GO:0008234	cysteine-type peptidase activity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	44.51	24.11	64.91
CcL	In ants, during behavior modification	48.07	26.05	70.10
CcD	In ants, recently dead	55.85	30.18	81.53

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.778607	no
SC16a	CcD	0.355418	no
CcL	CcD	0.558622	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5|3096 MTCPHLDALGAELSPPSASQSVYREDCTQCFDSIDEPSGLDVCLQCFNGACAGARLHNGLHASLWKHPLALNIRR TRKPMVRDEPPTKMSKLAIVAESDEDRYDTALSAKCLDCDASLDMTDARLAPIVDGILKANTFARKEEVKAWEQE LTGCEHILMLQQHESRNIQQGDLGHCSACDLRENLWLCLECGNLGCGRKQMGGVDGNSHALAHATESAHGVAVKL GSITPEGTADVYCYKCDDERLDDQLGPHLAHWGIMLADRRKTEMSLTEMQIEQNLKWDFSMTTDDGKLLKPLYGP GLTGLKNLGNSCYLASVAQCLFDLPSFRERYYRPTDSPPQVQEPAADLETQLRKLADGLLSGRYAKPDDDDAGPE PDVVHQQKGLAPAMLKHLIGRGHTEFSTMRQQDAFELFQHLVKLITRWPHGPGLDDPTRPFRFLLEQRLQCMGCG KVRYSEQEQDSIFINVPLEKLPRAEGDTGDQYKPVTLKQCLDTLTGAEKVELACSACRSTKGFTKQSLFKTFPDV LAVNANKMSVVNWVPVKVDVPVLVPDEPFLLDDYMSKGLQASEEPLPDEPEAPAPAFVPDAAALGQLEAMGFPRN RCEKALHATGNSDANAAMEWLFARMEDADIDAPLDLDASPVADPAKIETLGAMGFDAPLAGKALKETGGDVQRAI EWLFNHPDETGLVEEEVAPAAAREPAGSRSLPASFQLRSIVCHKGTSIHAGHYVAFIRKQLAGQGAQWVLFNDEK VVEAHDFEEMRKFAYVYFFERV
Coding	>Ophio5|3096 ATGACGTGCCCACACCTCGACGCGCTCGGCGCAGAGCTCTCCCCGCCCAGCGCCAGCCAGTCGGTCTATCGCGAA GACTGTACTCAGTGCTTCGATTCCATCGACGAGCCCAGCGGCCTCGATGTCTGTCTCCAGTGCTTCAACGGCGCC TGCGCGGGTGCCAGGCTGCACAACGGCCTCCACGCCAGTCTCTGGAAGCATCCTTTAGCGCTCAACATCCGCCGC ACGCGTAAGCCCATGGTCCGAGATGAGCCCCCTACCAAAATGTCCAAGCTGGCCATCGTGGCCGAGTCGGACGAG GATCGATACGACACGGCCCTCTCTGCAAAATGCCTTGATTGCGATGCCTCGCTCGATATGACCGACGCCCGCCTC GCTCCCATCGTCGACGGCATCCTCAAGGCCAACACGTTCGCGCGGAAAGAGGAGGTCAAGGCCTGGGAGCAGGAG TTGACGGGCTGCGAGCACATCCTCATGCTGCAGCAGCACGAGTCGCGCAATATCCAACAGGGTGACCTCGGCCAC TGCTCTGCCTGCGACCTGCGCGAGAACCTGTGGCTCTGCCTCGAATGCGGAAACTTGGGCTGTGGCCGCAAACAG ATGGGGGGCGTCGACGGCAACTCGCACGCCCTCGCACACGCGACCGAGTCGGCACACGGCGTCGCCGTCAAGCTC GGCTCCATCACTCCCGAGGGCACCGCCGACGTCTACTGCTACAAGTGCGACGACGAGCGCCTCGACGACCAGCTC GGCCCCCATCTCGCCCACTGGGGCATCATGCTGGCTGACCGCCGCAAGACGGAGATGAGCCTGACGGAGATGCAG ATCGAGCAGAATCTCAAGTGGGACTTTAGCATGACTACCGACGACGGCAAGCTTCTGAAGCCCCTCTACGGCCCG GGCCTTACCGGCCTCAAGAACCTGGGCAACAGCTGCTACCTGGCCAGCGTCGCGCAGTGCCTCTTCGACCTGCCG TCCTTCCGAGAGCGCTACTACAGACCTACCGATTCCCCGCCTCAAGTCCAGGAGCCGGCGGCCGATCTGGAGACG CAGCTGCGCAAGCTTGCCGATGGCCTCTTGTCGGGGCGCTATGCCAAGCCGGACGACGACGACGCGGGCCCGGAA CCAGACGTCGTCCACCAACAAAAGGGCCTGGCGCCGGCCATGCTGAAGCATCTCATCGGCAGAGGTCACACCGAG TTCTCCACTATGCGGCAGCAGGACGCCTTCGAGCTGTTCCAGCACCTCGTCAAGCTCATCACGCGATGGCCGCAC GGCCCCGGCCTCGACGACCCGACCAGGCCCTTCCGCTTTCTCCTAGAGCAGAGGCTGCAGTGTATGGGCTGCGGC AAGGTGCGGTACAGCGAGCAAGAGCAGGACAGCATCTTCATCAACGTGCCGCTCGAGAAGCTGCCCCGGGCCGAG GGCGATACGGGCGACCAGTACAAGCCCGTCACCCTGAAGCAGTGCCTCGACACCTTGACGGGGGCGGAAAAGGTG GAACTGGCCTGCTCGGCCTGCCGGAGCACCAAGGGCTTCACCAAGCAGTCGCTTTTCAAGACGTTTCCCGACGTG CTCGCGGTCAACGCCAACAAAATGTCCGTCGTCAACTGGGTGCCCGTCAAGGTCGACGTCCCCGTCCTCGTCCCG GACGAGCCCTTTCTACTGGACGACTACATGTCCAAGGGCTTGCAGGCGTCGGAGGAGCCTCTGCCGGACGAGCCC GAGGCGCCGGCGCCGGCCTTTGTACCCGATGCCGCCGCCCTCGGCCAGCTGGAGGCCATGGGATTCCCGCGCAAC CGCTGCGAGAAGGCGCTGCACGCCACCGGAAACTCGGACGCCAACGCCGCCATGGAGTGGCTCTTTGCGCGCATG GAGGATGCCGACATCGACGCGCCTCTCGATCTGGACGCCAGCCCCGTCGCCGATCCGGCCAAGATTGAGACGCTG GGCGCCATGGGCTTCGACGCGCCTCTTGCCGGAAAGGCCCTCAAGGAGACGGGCGGCGACGTGCAGCGCGCCATC GAATGGCTCTTTAACCATCCGGATGAAACGGGCTTGGTCGAGGAAGAGGTGGCCCCCGCAGCTGCTAGGGAGCCC GCCGGCAGTCGGTCGCTCCCCGCCAGCTTCCAGCTGCGGTCCATTGTCTGCCACAAGGGGACCAGTATCCATGCG GGGCACTACGTGGCCTTTATCCGGAAGCAGCTCGCAGGGCAGGGCGCCCAGTGGGTGCTGTTCAACGACGAAAAG GTTGTCGAGGCGCACGATTTCGAAGAGATGCGGAAATTTGCCTACGTGTATTTTTTCGAGCGCGTA
Transcript	>Ophio5|3096 ATGACGTGCCCACACCTCGACGCGCTCGGCGCAGAGCTCTCCCCGCCCAGCGCCAGCCAGTCGGTCTATCGCGAA GACTGTACTCAGTGCTTCGATTCCATCGACGAGCCCAGCGGCCTCGATGTCTGTCTCCAGTGCTTCAACGGCGCC TGCGCGGGTGCCAGGCTGCACAACGGCCTCCACGCCAGTCTCTGGAAGCATCCTTTAGCGCTCAACATCCGCCGC ACGCGTAAGCCCATGGTCCGAGATGAGCCCCCTACCAAAATGTCCAAGCTGGCCATCGTGGCCGAGTCGGACGAG GATCGATACGACACGGCCCTCTCTGCAAAATGCCTTGATTGCGATGCCTCGCTCGATATGACCGACGCCCGCCTC GCTCCCATCGTCGACGGCATCCTCAAGGCCAACACGTTCGCGCGGAAAGAGGAGGTCAAGGCCTGGGAGCAGGAG TTGACGGGCTGCGAGCACATCCTCATGCTGCAGCAGCACGAGTCGCGCAATATCCAACAGGGTGACCTCGGCCAC TGCTCTGCCTGCGACCTGCGCGAGAACCTGTGGCTCTGCCTCGAATGCGGAAACTTGGGCTGTGGCCGCAAACAG ATGGGGGGCGTCGACGGCAACTCGCACGCCCTCGCACACGCGACCGAGTCGGCACACGGCGTCGCCGTCAAGCTC GGCTCCATCACTCCCGAGGGCACCGCCGACGTCTACTGCTACAAGTGCGACGACGAGCGCCTCGACGACCAGCTC GGCCCCCATCTCGCCCACTGGGGCATCATGCTGGCTGACCGCCGCAAGACGGAGATGAGCCTGACGGAGATGCAG ATCGAGCAGAATCTCAAGTGGGACTTTAGCATGACTACCGACGACGGCAAGCTTCTGAAGCCCCTCTACGGCCCG GGCCTTACCGGCCTCAAGAACCTGGGCAACAGCTGCTACCTGGCCAGCGTCGCGCAGTGCCTCTTCGACCTGCCG TCCTTCCGAGAGCGCTACTACAGACCTACCGATTCCCCGCCTCAAGTCCAGGAGCCGGCGGCCGATCTGGAGACG CAGCTGCGCAAGCTTGCCGATGGCCTCTTGTCGGGGCGCTATGCCAAGCCGGACGACGACGACGCGGGCCCGGAA CCAGACGTCGTCCACCAACAAAAGGGCCTGGCGCCGGCCATGCTGAAGCATCTCATCGGCAGAGGTCACACCGAG TTCTCCACTATGCGGCAGCAGGACGCCTTCGAGCTGTTCCAGCACCTCGTCAAGCTCATCACGCGATGGCCGCAC GGCCCCGGCCTCGACGACCCGACCAGGCCCTTCCGCTTTCTCCTAGAGCAGAGGCTGCAGTGTATGGGCTGCGGC AAGGTGCGGTACAGCGAGCAAGAGCAGGACAGCATCTTCATCAACGTGCCGCTCGAGAAGCTGCCCCGGGCCGAG GGCGATACGGGCGACCAGTACAAGCCCGTCACCCTGAAGCAGTGCCTCGACACCTTGACGGGGGCGGAAAAGGTG GAACTGGCCTGCTCGGCCTGCCGGAGCACCAAGGGCTTCACCAAGCAGTCGCTTTTCAAGACGTTTCCCGACGTG CTCGCGGTCAACGCCAACAAAATGTCCGTCGTCAACTGGGTGCCCGTCAAGGTCGACGTCCCCGTCCTCGTCCCG GACGAGCCCTTTCTACTGGACGACTACATGTCCAAGGGCTTGCAGGCGTCGGAGGAGCCTCTGCCGGACGAGCCC GAGGCGCCGGCGCCGGCCTTTGTACCCGATGCCGCCGCCCTCGGCCAGCTGGAGGCCATGGGATTCCCGCGCAAC CGCTGCGAGAAGGCGCTGCACGCCACCGGAAACTCGGACGCCAACGCCGCCATGGAGTGGCTCTTTGCGCGCATG GAGGATGCCGACATCGACGCGCCTCTCGATCTGGACGCCAGCCCCGTCGCCGATCCGGCCAAGATTGAGACGCTG GGCGCCATGGGCTTCGACGCGCCTCTTGCCGGAAAGGCCCTCAAGGAGACGGGCGGCGACGTGCAGCGCGCCATC GAATGGCTCTTTAACCATCCGGATGAAACGGGCTTGGTCGAGGAAGAGGTGGCCCCCGCAGCTGCTAGGGAGCCC GCCGGCAGTCGGTCGCTCCCCGCCAGCTTCCAGCTGCGGTCCATTGTCTGCCACAAGGGGACCAGTATCCATGCG GGGCACTACGTGGCCTTTATCCGGAAGCAGCTCGCAGGGCAGGGCGCCCAGTGGGTGCTGTTCAACGACGAAAAG GTTGTCGAGGCGCACGATTTCGAAGAGATGCGGAAATTTGCCTACGTGTATTTTTTCGAGCGCGTATGA
Gene	>Ophio5|3096 ATGACGTGCCCACACCTCGACGCGCTCGGCGCAGGTACGTCCTGCTGATCCTACTCGGCTCCCGCTGGTCACGTC CGAGGCTCACGCAGCGTCCAGAGCTCTCCCCGCCCAGCGCCAGCCAGTCGGTCTATCGCGAAGACTGTACTCAGT GCTTCGATTCCATCGTGCGTCGGCCGCTGACGCTACCCTCTCTCGCCTTGAAAGTGGCTGACATGCCCCCTGCCT CAGGACGAGCCCAGCGGCCTCGATGTCTGTCTCCAGTGCTTCAACGGCGCCTGCGCGGGTGCCAGGCTGCACAAC GGCCTCCACGCCAGTCTCTGGAAGCATCCTTTAGCGCTCAACATCCGCCGCACGCGTAAGCCCATGGTCCGAGAT GAGCCCCCTACCAAAATGTCCAAGCTGGCCATCGTGGCCGAGTCGGACGAGGATCGATACGACACGGCCCTCTCT GCAAAATGCCTTGATTGCGATGCCTCGCTCGATATGACCGACGCCCGCCTCGCTCCCATCGTCGACGGCATCCTC AAGGCCAACACGTTCGCGCGGAAAGAGGAGGTCAAGGCCTGGGAGCAGGAGTTGACGGGCTGCGAGCACATCCTC ATGCTGCAGCAGCACGAGTCGCGCAATATCCAACAGGGTGACCTCGGCCACTGCTCTGCCTGCGACCTGCGCGAG AACCTGTGGCTCTGCCTCGAATGCGGAAACTTGGGCTGTGGCCGCAAACAGATGGGGGGCGTCGACGGCAACTCG CACGCCCTCGCACACGCGACCGAGTCGGCACACGGCGTCGCCGTCAAGCTCGGCTCCATCACTCCCGAGGGCACC GCCGACGTCTACTGCTACAAGTGCGACGACGAGCGCCTCGACGACCAGCTCGGCCCCCATCTCGCCCACTGGGGC ATCATGCTGGCTGACCGCCGCAAGACGGAGATGAGCCTGACGGAGATGCAGATCGAGCAGAATCTCAAGTGGGAC TTTAGCATGACTACCGACGACGGCAAGCTTCTGAAGCCCCTCTACGGCCCGGGCCTTACCGGCCTCAAGAACCTG GGCAACAGCTGCTACCTGGCCAGCGTCGCGCAGTGCCTCTTCGACCTGCCGTCCTTCCGAGAGCGCTACTACAGA CCTACCGATTCCCCGCCTCAAGTCCAGGAGCCGGCGGCCGATCTGGAGACGCAGCTGCGCAAGCTTGCCGATGGC CTCTTGTCGGGGCGCTATGCCAAGCCGGACGACGACGACGCGGGCCCGGAACCAGACGTCGTCCACCAACAAAAG GGCCTGGCGCCGGCCATGCTGAAGCATCTCATCGGCAGAGGTCACACCGAGTTCTCCACTATGCGGCAGCAGGAC GCCTTCGAGCTGTTCCAGCACCTCGTCAAGCTCATCACGCGATGGCCGCACGGCCCCGGCCTCGACGACCCGACC AGGCCCTTCCGCTTTCTCCTAGAGCAGAGGCTGCAGTGTATGGGCTGCGGCAAGGTGCGGTACAGCGAGCAAGAG CAGGACAGCATCTTCATCAACGTGCCGCTCGAGAAGCTGCCCCGGGCCGAGGGCGATACGGGCGACCAGTACAAG CCCGTCACCCTGAAGCAGTGCCTCGACACCTTGACGGGGGCGGAAAAGGTGGAACTGGCCTGCTCGGCCTGCCGG AGCACCAAGGGCTTCACCAAGCAGTCGCTTTTCAAGACGTTTCCCGACGTGCTCGCGGTCAACGCCAACAAAATG TCCGTCGTCAACTGGGTGCCCGTCAAGGTCGACGTCCCCGTCCTCGTCCCGGACGAGCCCTTTCTACTGGACGAC TACATGTCCAAGGGCTTGCAGGCGTCGGAGGAGCCTCTGCCGGACGAGCCCGAGGCGCCGGCGCCGGCCTTTGTA CCCGATGCCGCCGCCCTCGGCCAGCTGGAGGCCATGGGATTCCCGCGCAACCGCTGCGAGAAGGCGCTGCACGCC ACCGGAAACTCGGACGCCAACGCCGCCATGGAGTGGCTCTTTGCGCGCATGGAGGATGCCGACATCGACGCGCCT CTCGATCTGGACGCCAGCCCCGTCGCCGATCCGGCCAAGATTGAGACGCTGGGCGCCATGGGCTTCGACGCGCCT CTTGCCGGAAAGGCCCTCAAGGAGACGGGCGGCGACGTGCAGCGCGCCATCGAATGGCTCTTTAACCATCCGGAT GAAACGGGCTTGGTCGAGGAAGAGGTGGCCCCCGCAGCTGCTAGGGAGCCCGCCGGCAGTCGGTCGCTCCCCGCC AGCTTCCAGCTGCGGTCCATTGTCTGCCACAAGGGGACCAGTATCCATGCGGGGTAGGTCTTCTCGCCGTCCTTG TGGCGCCAAGCCCCCCTTTCCCCCTTACTGACCCTTTCCAGGCACTACGTGGCCTTTATCCGGAAGCAGCTCGCA GGGCAGGGCGCCCAGTGGGTGCTGTTCAACGACGAAAAGGTTGTCGAGGCGCACGATTTCGAAGAGATGCGGAAA TTTGCCTACGTGTATTTTTTCGAGCGCGTATGA