© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|3090 |
| Gene name | |
| Location | scaffold_246:9024..9455 |
| Strand | - |
| Gene length (bp) | 431 |
| Transcript length (bp) | 306 |
| Coding sequence length (bp) | 303 |
| Protein length (aa) | 101 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.4783 | 0.3614 | 0.4929 | 0.0839 | 0.1577 | 0.1488 | 0.2375 | 0.1478 | 0.1413 | 0.1444 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 39 | 61 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 15765 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|3090 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|3090 MHFDAELPPSLISYIPKLSQLRFLLPTASSPLAAASLSLSLAHLALALALTLALALTLALGAQSEDELAGPIPWE LVEGFVNERELAEGLVERPDEERPVE |
| Coding | >Ophio5|3090 ATGCACTTCGACGCAGAGCTTCCTCCCTCTCTCATTAGTTATATCCCGAAGCTATCGCAATTGCGTTTTTTGCTG CCTACCGCCTCGTCGCCTCTCGCCGCCGCTTCTCTCTCTCTCTCTCTCGCACACCTCGCCCTCGCCCTCGCCCTT ACCCTCGCCCTCGCCCTTACCCTCGCCCTCGGAGCTCAGTCAGAAGACGAGCTCGCGGGCCCTATTCCTTGGGAA TTGGTAGAGGGCTTTGTCAACGAGAGAGAGCTCGCCGAGGGCCTCGTTGAGCGGCCTGACGAGGAGCGGCCAGTG GAA |
| Transcript | >Ophio5|3090 ATGCACTTCGACGCAGAGCTTCCTCCCTCTCTCATTAGTTATATCCCGAAGCTATCGCAATTGCGTTTTTTGCTG CCTACCGCCTCGTCGCCTCTCGCCGCCGCTTCTCTCTCTCTCTCTCTCGCACACCTCGCCCTCGCCCTCGCCCTT ACCCTCGCCCTCGCCCTTACCCTCGCCCTCGGAGCTCAGTCAGAAGACGAGCTCGCGGGCCCTATTCCTTGGGAA TTGGTAGAGGGCTTTGTCAACGAGAGAGAGCTCGCCGAGGGCCTCGTTGAGCGGCCTGACGAGGAGCGGCCAGTG GAATAA |
| Gene | >Ophio5|3090 ATGCACTTCGACGCAGAGCTTCCTCCCTCTCTCATTAGTTATATCCCGAAGCTATCGCAATTGCGTTTTTTGCTG CCTACCGCCTCGTCGCCTCTCGCCGCCGCTTCTCTCTCTCTCTCTCTCGCACGTACGAGCCGGGCACACAGATGC CACGAGCGTATCAACGCCGCTAGACCTCGCCCTCGCCCTCGCCCTTACCCTCGCCCTCGCCCTTACCCTCGCCCT CGGAGCTCGTCAACGCCGGCGGCGAAGATCACGAAGATCACGACCACGGCTTCGTACGGCGCCAGCAGCCGTACT ATAATGAGTCAGAGTCAGAAGACGAGCTCGCGGGCCCTATTCCTTGGGAATTGGTAGAGGGCTTTGTCAACGAGA GAGAGCTCGCCGAGGGCCTCGTTGAGCGGCCTGACGAGGAGCGGCCAGTGGAATAA |