Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3088
Gene name
Locationscaffold_246:2740..4871
Strand-
Gene length (bp)2131
Transcript length (bp)1680
Coding sequence length (bp)1677
Protein length (aa) 559

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 3.6E-06 6 36
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 9.1E-05 199 273

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0065007 biological regulation No
GO:0046872 metal ion binding No
GO:0010468 regulation of gene expression No
GO:0043167 ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0005488 binding No
GO:0080090 regulation of primary metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0050789 regulation of biological process No
GO:0003700 DNA-binding transcription factor activity No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3088
MPAVKHPCLQCKEKHVKCDEERPKCRRCELRHLPCSRPVRKTVFKHDSVASFSKDQKWVNSQAKHFRFHPRGAAT
ARDPPPVETIIAPLDLSRIPRRDPLGLPRCLSPHSLRNGRPDHCESTRESNPFPPPAIPSIAYITSPPGPYERSN
TESSSTASPLPYPPHESPALPSLSLIVAQPGCDDGSSRFPLLDVQEACLLRYFIDEMSHWFDLCDQHRHFQLVVP
VRAAKHPHLLHAIFAVAARHLSRLPQYKTSQGILYHGQLLPNLNEHAAVEYMLKCIPALRQFHDMHDEDYRDSII
TTAVILRQLEEIDQEDDSGIERKQVNFLAIIDAVLRSLPSFDVFGQRSLMQAAYWMALRQEIFNSFTRHEAPQLM
LPLEFWHSASKANKVVMHLVQTAKWHWGDGSEVEWQRLSKQQELIEQNVLVAFRPTYQRTADKTKGEIFPTIWYA
SNIDVTSIQLSLIAKAVLVAENPYLKSPTASRANWRHVENEVRVLLLDLCAIALCHPASPPSLVHSALGIGMYGD
FFTDPYERQAIRTVVERYRDAHAWPVQRLLEKFR
Coding >Ophio5|3088
ATGCCGGCGGTAAAACATCCCTGCCTTCAGTGCAAAGAGAAACACGTAAAATGCGACGAAGAAAGGCCAAAATGC
CGCCGCTGTGAGCTCAGGCATCTCCCCTGCTCTCGACCAGTCCGCAAGACCGTCTTCAAACACGACTCCGTCGCC
AGCTTCTCCAAGGATCAGAAATGGGTCAACAGTCAGGCCAAGCACTTTCGCTTCCATCCTCGCGGCGCTGCGACG
GCACGTGACCCACCACCCGTGGAAACCATCATCGCGCCGCTTGATCTCAGCCGAATCCCTCGTCGCGATCCTCTG
GGGCTTCCCCGATGCCTCTCCCCACATAGTCTGCGAAATGGCCGTCCCGATCATTGCGAGTCGACCAGAGAGTCG
AATCCATTTCCTCCTCCCGCCATTCCCTCCATCGCCTACATCACCTCCCCTCCGGGCCCTTACGAGCGAAGCAAT
ACCGAGTCCAGCTCTACCGCTTCGCCTCTTCCTTATCCGCCTCACGAGTCCCCCGCCCTTCCGTCTTTGAGCCTG
ATAGTCGCCCAACCGGGCTGCGACGATGGCTCATCGCGATTCCCTCTGCTGGACGTTCAGGAAGCCTGTCTGCTA
CGCTACTTTATTGACGAAATGTCACACTGGTTCGACCTCTGTGACCAACATCGCCACTTCCAGCTCGTCGTCCCC
GTCCGAGCCGCGAAGCATCCCCATCTACTTCACGCCATCTTCGCCGTCGCCGCTCGCCATCTCAGCCGCTTGCCT
CAATACAAGACGTCTCAGGGAATCCTCTACCACGGCCAGCTGCTGCCCAACCTCAACGAGCACGCCGCCGTCGAG
TACATGCTCAAGTGCATACCTGCCCTCCGCCAGTTCCATGACATGCACGACGAAGACTATCGAGACAGCATAATC
ACCACCGCCGTCATTCTGCGCCAGCTCGAGGAGATTGACCAAGAGGACGACTCCGGCATAGAGAGGAAACAGGTC
AACTTCCTCGCCATCATCGATGCCGTCCTGAGAAGCCTGCCCTCCTTTGACGTCTTTGGCCAGCGCAGTCTGATG
CAGGCTGCCTATTGGATGGCCCTCCGTCAGGAAATCTTCAATTCATTCACCCGCCACGAGGCCCCCCAACTGATG
CTCCCTCTTGAATTCTGGCATAGCGCCTCCAAGGCAAACAAGGTCGTCATGCACCTTGTACAGACGGCCAAGTGG
CACTGGGGTGACGGCTCAGAGGTCGAGTGGCAGCGGCTGTCAAAGCAGCAGGAACTCATCGAGCAAAATGTCCTG
GTCGCATTTCGGCCCACCTATCAAAGGACCGCCGACAAGACCAAGGGCGAGATTTTCCCTACGATATGGTATGCG
TCCAACATTGATGTCACCAGCATACAGCTGTCTCTCATCGCCAAGGCCGTCCTCGTAGCCGAGAACCCCTATCTA
AAATCCCCAACGGCCTCGAGGGCCAATTGGCGACACGTAGAGAACGAGGTGAGAGTTCTCCTGCTCGACCTGTGC
GCTATCGCTCTCTGCCACCCCGCATCGCCGCCCTCGCTCGTCCATTCCGCCCTCGGCATCGGCATGTACGGCGAC
TTCTTCACCGACCCTTATGAACGGCAGGCCATCCGGACCGTCGTGGAGAGGTATCGCGATGCGCACGCCTGGCCC
GTCCAGCGACTATTGGAGAAGTTTCGG
Transcript >Ophio5|3088
ATGCCGGCGGTAAAACATCCCTGCCTTCAGTGCAAAGAGAAACACGTAAAATGCGACGAAGAAAGGCCAAAATGC
CGCCGCTGTGAGCTCAGGCATCTCCCCTGCTCTCGACCAGTCCGCAAGACCGTCTTCAAACACGACTCCGTCGCC
AGCTTCTCCAAGGATCAGAAATGGGTCAACAGTCAGGCCAAGCACTTTCGCTTCCATCCTCGCGGCGCTGCGACG
GCACGTGACCCACCACCCGTGGAAACCATCATCGCGCCGCTTGATCTCAGCCGAATCCCTCGTCGCGATCCTCTG
GGGCTTCCCCGATGCCTCTCCCCACATAGTCTGCGAAATGGCCGTCCCGATCATTGCGAGTCGACCAGAGAGTCG
AATCCATTTCCTCCTCCCGCCATTCCCTCCATCGCCTACATCACCTCCCCTCCGGGCCCTTACGAGCGAAGCAAT
ACCGAGTCCAGCTCTACCGCTTCGCCTCTTCCTTATCCGCCTCACGAGTCCCCCGCCCTTCCGTCTTTGAGCCTG
ATAGTCGCCCAACCGGGCTGCGACGATGGCTCATCGCGATTCCCTCTGCTGGACGTTCAGGAAGCCTGTCTGCTA
CGCTACTTTATTGACGAAATGTCACACTGGTTCGACCTCTGTGACCAACATCGCCACTTCCAGCTCGTCGTCCCC
GTCCGAGCCGCGAAGCATCCCCATCTACTTCACGCCATCTTCGCCGTCGCCGCTCGCCATCTCAGCCGCTTGCCT
CAATACAAGACGTCTCAGGGAATCCTCTACCACGGCCAGCTGCTGCCCAACCTCAACGAGCACGCCGCCGTCGAG
TACATGCTCAAGTGCATACCTGCCCTCCGCCAGTTCCATGACATGCACGACGAAGACTATCGAGACAGCATAATC
ACCACCGCCGTCATTCTGCGCCAGCTCGAGGAGATTGACCAAGAGGACGACTCCGGCATAGAGAGGAAACAGGTC
AACTTCCTCGCCATCATCGATGCCGTCCTGAGAAGCCTGCCCTCCTTTGACGTCTTTGGCCAGCGCAGTCTGATG
CAGGCTGCCTATTGGATGGCCCTCCGTCAGGAAATCTTCAATTCATTCACCCGCCACGAGGCCCCCCAACTGATG
CTCCCTCTTGAATTCTGGCATAGCGCCTCCAAGGCAAACAAGGTCGTCATGCACCTTGTACAGACGGCCAAGTGG
CACTGGGGTGACGGCTCAGAGGTCGAGTGGCAGCGGCTGTCAAAGCAGCAGGAACTCATCGAGCAAAATGTCCTG
GTCGCATTTCGGCCCACCTATCAAAGGACCGCCGACAAGACCAAGGGCGAGATTTTCCCTACGATATGGTATGCG
TCCAACATTGATGTCACCAGCATACAGCTGTCTCTCATCGCCAAGGCCGTCCTCGTAGCCGAGAACCCCTATCTA
AAATCCCCAACGGCCTCGAGGGCCAATTGGCGACACGTAGAGAACGAGGTGAGAGTTCTCCTGCTCGACCTGTGC
GCTATCGCTCTCTGCCACCCCGCATCGCCGCCCTCGCTCGTCCATTCCGCCCTCGGCATCGGCATGTACGGCGAC
TTCTTCACCGACCCTTATGAACGGCAGGCCATCCGGACCGTCGTGGAGAGGTATCGCGATGCGCACGCCTGGCCC
GTCCAGCGACTATTGGAGAAGTTTCGGTGA
Gene >Ophio5|3088
ATGCCGGCGGTAAAACATCCCTGCCTTCAGTGCAAAGGTTTGTCCGCATCATTCATCCTTGATTCTCTTTGCTTC
TCCTTCCCCCTTCTACTGTCATCGGATGGAGTTGGAAGAGGGAAAAAAAAATCCATCTCTTCTCATGGCTCGCTG
ACTGACTGACTGACTTGTCCCCAAATCGCAGAGAAACACGTAAAATGTCATAACCCCTCTCCTAACAAAACCCCC
GCCCCCAAAAGGCTCAACTGACGATGCCCCCCCAGGCGACGAAGAAAGGCCAAAATGCCGCCGCTGTGAGCTCAG
GCATCTCCCCTGCTCTCGACCAGTCCGCAAGACCGTCTTCAAACACGACTCCGTCGCCAGCTTCTCCAAGGATCA
GAAATGGGTCAACAGTCAGGCCAAGCACTGTAAATGGTGCCGTTCCCGCTTTCTTCCAGACCCTCGGGGCTTACC
CTGGCCACCTACAGTTCGCTTCCATCCTCGCGGCGCTGCGACGGCACGTGACCCACCACCCGTGGAAACCATCAT
CGCGCCGCTTGATCTCAGCCGAATCCCTCGTCGCGATCCTCTGGGGCTTCCCCGATGCCTCTCCCCACATAGTCT
GCGAAATGGCCGTCCCGATCATTGCGAGTCGACCAGAGAGTCGAATCCATTTCCTCCTCCCGCCATTCCCTCCAT
CGCCTACATCACCTCCCCTCCGGGCCCTTACGAGCGAAGCAATACCGAGTCCAGCTCTACCGCTTCGCCTCTTCC
TTATCCGCCTCACGAGTCCCCCGCCCTTCCGTCTTTGAGCCTGATAGTCGCCCAACCGGGCTGCGACGATGGCTC
ATCGCGATTCCCTCTGCTGGACGTTCAGGAAGCCTGTCTGCTACGCTACTTTATTGACGAAATGTCACACTGGGT
ATTGGCTTCTTTGCTACCTCAACCCCCTTTCTCTGTTACGCCCTCGCTGACTCTTCCATCCCAGTTCGACCTCTG
TGACCAACATCGCCACTTCCAGCTCGTCGTCCCCGTCCGAGCCGCGAAGCATCCCCATCTACTTCACGCCATCTT
CGCCGTCGCCGCTCGCCATCTCAGCCGCTTGCCTCAATACAAGACGTCTCAGGGAATCCTCTACCACGGCCAGCT
GCTGCCCAACCTCAACGAGCACGCCGCCGTCGAGTACATGCTCAAGTGCATACCTGCCCTCCGCCAGTTCCATGA
CATGCACGACGAAGACTATCGAGACAGCATAATCACCACCGCCGTCATTCTGCGCCAGCTCGAGGAGATTGACCA
AGAGGACGACTCCGGCATAGAGAGGAAACAGGTCAACTTCCTCGCCATCATCGATGCCGTCCTGAGAAGCCTGCC
CTCCTTTGACGTCTTTGGCCAGCGCAGTCTGATGCAGGCTGCCTATTGGATGGCCCTCCGTCAGGAAATCTTCAA
TTCATTCACCCGCCACGAGGCCCCCCAACTGATGCTCCCTCTTGAATTCTGGCATAGCGCCTCCAAGGCAAACAA
GGTCGTCATGCACCTTGTACAGACGGCCAAGTGGCACTGGGGTGACGGCTCAGAGGTCGAGTGGCGTGAGTCATC
CTCGGCCCGTGCCCCTGAGCAGAGAGACTGATGTGTTCCGCACCAGAGCGGCTGTCAAAGCAGCAGGAACTCATC
GAGCAAAATGTCCTGGTCGCATTTCGGCCCACCTATCAAAGGACCGCCGACAAGACCAAGGGCGAGATTTTCCCT
ACGATATGGTATGCGTCCAACATTGATGTCACCAGCATACAGCTGTCTCTCATCGCCAAGGCCGTCCTCGTAGCC
GAGAACCCCTATCTAAAGTGCGTCGTCTCCAGCCATGGCCTCGTCGGGAGAGACCCGCCGCTGACAATCAGGCCA
CAGATCCCCAACGGCCTCGAGGGCCAATTGGCGACACGTAGAGAACGAGGTGAGAGTTCTCCTGCTCGACCTGTG
CGCTATCGCTCTCTGCCACCCCGCATCGCCGCCCTCGCTCGTCCATTCCGCCCTCGGCATCGGCATGTACGGCGA
CTTCTTCACCGACCCTTATGAACGGCAGGCCATCCGGACCGTCGTGGAGAGGTATCGCGATGCGCACGCCTGGCC
CGTCCAGCGACTATTGGAGAAGTTTCGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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