Protein ID | Ophio5|3072 |
Gene name | |
Location | scaffold_244:9129..10807 |
Strand | - |
Gene length (bp) | 1678 |
Transcript length (bp) | 1611 |
Coding sequence length (bp) | 1608 |
Protein length (aa) | 536 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13191 | AAA_16 | AAA ATPase domain | 6.4E-09 | 124 | 274 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 54 | 76 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|3072 MRGLRLAATARAGVLDRQFLVLRRRRGLASTAAEKGKDAEPSLLVRMGESAATTFASIFVLGLGFATAGFIYHRT YKALVVRKMTRAFEPGDPVLELAAIGHDVPNAHRRGNYDDEDEEHWVRRPEQEHVDAIVAGRETGRYHLLLGDKG TGKSSMLIEAMHKVDGDGVSMLEAHADLEVVRLRLGKALDYEFHEDYIGGYFSERGPRDTTALLDIERALNKLDK VAIRLRRKRQRPLVLIVNQLHLLRDNDDGRDLIELLQQRAEQWAAANLVTVVFNSDDYWVYERLKPLATRMDVLA VGDLPRQQALDALRRYRRRYRGHDPSTAELEAVYSRVGGRLSFLGRVAKSQDMVATCDHIVDTERTWFLNQCWIL GAEMDDDVMDQQKWASSAMVLAQALVDTDSADDDQDDNYDAAAGHRLPSFALYEAQQIMTRSDFIRRLDSLGLFT ITSQARVRASSVPMQRALREICALPGFRQHLKDTLQRINDIESLGRTRELVAKDLVLGGRYEVVGPKGDVGTVKL VQADDGEKKDD |
Coding | >Ophio5|3072 ATGCGAGGCCTCCGGCTGGCGGCAACGGCCCGCGCTGGCGTTCTTGACCGGCAGTTTCTGGTTCTTCGGCGACGG CGTGGATTGGCGTCAACTGCGGCCGAAAAGGGGAAAGATGCTGAGCCCTCGCTCCTCGTGCGGATGGGCGAGTCG GCGGCGACGACGTTCGCGTCCATCTTCGTCCTCGGTCTTGGCTTTGCTACCGCCGGCTTCATCTATCATCGTACC TATAAGGCCCTCGTGGTGCGCAAGATGACGCGTGCCTTTGAGCCCGGCGACCCCGTGCTGGAGCTGGCGGCCATC GGGCACGACGTGCCCAACGCACATCGCCGAGGCAACTATGACGACGAGGACGAGGAACACTGGGTCCGGCGTCCC GAGCAGGAGCATGTCGACGCCATCGTCGCCGGCCGCGAAACCGGCCGCTACCACCTGCTGCTCGGCGACAAGGGC ACGGGCAAGAGCAGTATGCTGATCGAGGCCATGCACAAGGTCGATGGCGATGGCGTCTCTATGCTCGAGGCCCAT GCTGACCTCGAGGTCGTTCGGCTGCGGCTGGGAAAGGCGCTCGACTACGAGTTTCACGAGGATTACATCGGTGGC TACTTTAGCGAGCGAGGGCCGCGCGATACGACGGCGCTGCTTGACATTGAACGTGCCCTTAATAAGCTGGACAAG GTAGCCATCCGGCTACGGCGGAAGCGCCAGCGGCCGCTCGTCCTCATCGTCAACCAGCTGCATCTGCTGCGTGAC AACGACGATGGTCGTGATCTCATCGAGTTGCTGCAGCAGCGCGCCGAGCAGTGGGCCGCTGCGAATCTCGTCACC GTCGTCTTCAACTCGGACGACTACTGGGTCTACGAGAGGCTGAAGCCGCTAGCCACCCGCATGGATGTCCTGGCC GTCGGCGACCTGCCGCGACAGCAGGCGCTGGACGCGCTGCGACGATACCGCCGTCGCTATCGTGGCCATGACCCG TCTACGGCCGAGCTCGAGGCCGTATACAGTCGAGTCGGCGGCCGGCTGTCCTTTCTAGGCCGCGTGGCCAAAAGC CAAGACATGGTGGCGACGTGTGACCACATCGTCGACACAGAACGCACCTGGTTCCTCAACCAGTGCTGGATCCTG GGCGCCGAAATGGATGACGACGTCATGGACCAGCAGAAGTGGGCGTCGTCAGCCATGGTTCTGGCCCAGGCACTC GTCGACACCGACTCGGCCGACGACGATCAAGACGACAACTACGACGCCGCGGCCGGCCACCGCCTTCCGTCATTT GCGCTGTACGAAGCGCAGCAGATCATGACGCGCAGCGACTTCATCCGCCGACTCGACAGCCTCGGCCTCTTCACC ATCACCAGCCAGGCGAGGGTGAGAGCCAGCAGTGTGCCGATGCAGCGGGCGCTGCGCGAGATCTGCGCCCTTCCC GGGTTCCGGCAGCACTTGAAAGACACGCTGCAGCGCATTAATGACATTGAGAGCTTGGGCCGTACGCGTGAGCTC GTCGCCAAGGACTTGGTGCTGGGTGGGCGGTATGAGGTTGTTGGTCCCAAGGGCGACGTTGGCACTGTCAAGCTG GTGCAGGCCGACGATGGAGAGAAGAAGGATGAT |
Transcript | >Ophio5|3072 ATGCGAGGCCTCCGGCTGGCGGCAACGGCCCGCGCTGGCGTTCTTGACCGGCAGTTTCTGGTTCTTCGGCGACGG CGTGGATTGGCGTCAACTGCGGCCGAAAAGGGGAAAGATGCTGAGCCCTCGCTCCTCGTGCGGATGGGCGAGTCG GCGGCGACGACGTTCGCGTCCATCTTCGTCCTCGGTCTTGGCTTTGCTACCGCCGGCTTCATCTATCATCGTACC TATAAGGCCCTCGTGGTGCGCAAGATGACGCGTGCCTTTGAGCCCGGCGACCCCGTGCTGGAGCTGGCGGCCATC GGGCACGACGTGCCCAACGCACATCGCCGAGGCAACTATGACGACGAGGACGAGGAACACTGGGTCCGGCGTCCC GAGCAGGAGCATGTCGACGCCATCGTCGCCGGCCGCGAAACCGGCCGCTACCACCTGCTGCTCGGCGACAAGGGC ACGGGCAAGAGCAGTATGCTGATCGAGGCCATGCACAAGGTCGATGGCGATGGCGTCTCTATGCTCGAGGCCCAT GCTGACCTCGAGGTCGTTCGGCTGCGGCTGGGAAAGGCGCTCGACTACGAGTTTCACGAGGATTACATCGGTGGC TACTTTAGCGAGCGAGGGCCGCGCGATACGACGGCGCTGCTTGACATTGAACGTGCCCTTAATAAGCTGGACAAG GTAGCCATCCGGCTACGGCGGAAGCGCCAGCGGCCGCTCGTCCTCATCGTCAACCAGCTGCATCTGCTGCGTGAC AACGACGATGGTCGTGATCTCATCGAGTTGCTGCAGCAGCGCGCCGAGCAGTGGGCCGCTGCGAATCTCGTCACC GTCGTCTTCAACTCGGACGACTACTGGGTCTACGAGAGGCTGAAGCCGCTAGCCACCCGCATGGATGTCCTGGCC GTCGGCGACCTGCCGCGACAGCAGGCGCTGGACGCGCTGCGACGATACCGCCGTCGCTATCGTGGCCATGACCCG TCTACGGCCGAGCTCGAGGCCGTATACAGTCGAGTCGGCGGCCGGCTGTCCTTTCTAGGCCGCGTGGCCAAAAGC CAAGACATGGTGGCGACGTGTGACCACATCGTCGACACAGAACGCACCTGGTTCCTCAACCAGTGCTGGATCCTG GGCGCCGAAATGGATGACGACGTCATGGACCAGCAGAAGTGGGCGTCGTCAGCCATGGTTCTGGCCCAGGCACTC GTCGACACCGACTCGGCCGACGACGATCAAGACGACAACTACGACGCCGCGGCCGGCCACCGCCTTCCGTCATTT GCGCTGTACGAAGCGCAGCAGATCATGACGCGCAGCGACTTCATCCGCCGACTCGACAGCCTCGGCCTCTTCACC ATCACCAGCCAGGCGAGGGTGAGAGCCAGCAGTGTGCCGATGCAGCGGGCGCTGCGCGAGATCTGCGCCCTTCCC GGGTTCCGGCAGCACTTGAAAGACACGCTGCAGCGCATTAATGACATTGAGAGCTTGGGCCGTACGCGTGAGCTC GTCGCCAAGGACTTGGTGCTGGGTGGGCGGTATGAGGTTGTTGGTCCCAAGGGCGACGTTGGCACTGTCAAGCTG GTGCAGGCCGACGATGGAGAGAAGAAGGATGATTAG |
Gene | >Ophio5|3072 ATGCGAGGCCTCCGGCTGGCGGCAACGGCCCGCGCTGGCGTTCTTGACCGGCAGTTTCTGGTTCTTCGGCGACGG CGTGGATTGGCGTCAACTGCGGCCGAAAAGGGGAAAGGTGCGTGGTGGCAGGAAGCAAGAAGCGACAAGGAAAAT TGAATGACAGCGCTGACCGCTACAGCAAGATGCTGAGCCCTCGCTCCTCGTGCGGATGGGCGAGTCGGCGGCGAC GACGTTCGCGTCCATCTTCGTCCTCGGTCTTGGCTTTGCTACCGCCGGCTTCATCTATCATCGTACCTATAAGGC CCTCGTGGTGCGCAAGATGACGCGTGCCTTTGAGCCCGGCGACCCCGTGCTGGAGCTGGCGGCCATCGGGCACGA CGTGCCCAACGCACATCGCCGAGGCAACTATGACGACGAGGACGAGGAACACTGGGTCCGGCGTCCCGAGCAGGA GCATGTCGACGCCATCGTCGCCGGCCGCGAAACCGGCCGCTACCACCTGCTGCTCGGCGACAAGGGCACGGGCAA GAGCAGTATGCTGATCGAGGCCATGCACAAGGTCGATGGCGATGGCGTCTCTATGCTCGAGGCCCATGCTGACCT CGAGGTCGTTCGGCTGCGGCTGGGAAAGGCGCTCGACTACGAGTTTCACGAGGATTACATCGGTGGCTACTTTAG CGAGCGAGGGCCGCGCGATACGACGGCGCTGCTTGACATTGAACGTGCCCTTAATAAGCTGGACAAGGTAGCCAT CCGGCTACGGCGGAAGCGCCAGCGGCCGCTCGTCCTCATCGTCAACCAGCTGCATCTGCTGCGTGACAACGACGA TGGTCGTGATCTCATCGAGTTGCTGCAGCAGCGCGCCGAGCAGTGGGCCGCTGCGAATCTCGTCACCGTCGTCTT CAACTCGGACGACTACTGGGTCTACGAGAGGCTGAAGCCGCTAGCCACCCGCATGGATGTCCTGGCCGTCGGCGA CCTGCCGCGACAGCAGGCGCTGGACGCGCTGCGACGATACCGCCGTCGCTATCGTGGCCATGACCCGTCTACGGC CGAGCTCGAGGCCGTATACAGTCGAGTCGGCGGCCGGCTGTCCTTTCTAGGCCGCGTGGCCAAAAGCCAAGACAT GGTGGCGACGTGTGACCACATCGTCGACACAGAACGCACCTGGTTCCTCAACCAGTGCTGGATCCTGGGCGCCGA AATGGATGACGACGTCATGGACCAGCAGAAGTGGGCGTCGTCAGCCATGGTTCTGGCCCAGGCACTCGTCGACAC CGACTCGGCCGACGACGATCAAGACGACAACTACGACGCCGCGGCCGGCCACCGCCTTCCGTCATTTGCGCTGTA CGAAGCGCAGCAGATCATGACGCGCAGCGACTTCATCCGCCGACTCGACAGCCTCGGCCTCTTCACCATCACCAG CCAGGCGAGGGTGAGAGCCAGCAGTGTGCCGATGCAGCGGGCGCTGCGCGAGATCTGCGCCCTTCCCGGGTTCCG GCAGCACTTGAAAGACACGCTGCAGCGCATTAATGACATTGAGAGCTTGGGCCGTACGCGTGAGCTCGTCGCCAA GGACTTGGTGCTGGGTGGGCGGTATGAGGTTGTTGGTCCCAAGGGCGACGTTGGCACTGTCAAGCTGGTGCAGGC CGACGATGGAGAGAAGAAGGATGATTAG |