Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|3072
Gene name
Locationscaffold_244:9129..10807
Strand-
Gene length (bp)1678
Transcript length (bp)1611
Coding sequence length (bp)1608
Protein length (aa) 536

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13191 AAA_16 AAA ATPase domain 6.4E-09 124 274

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 54 76 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|3072
MRGLRLAATARAGVLDRQFLVLRRRRGLASTAAEKGKDAEPSLLVRMGESAATTFASIFVLGLGFATAGFIYHRT
YKALVVRKMTRAFEPGDPVLELAAIGHDVPNAHRRGNYDDEDEEHWVRRPEQEHVDAIVAGRETGRYHLLLGDKG
TGKSSMLIEAMHKVDGDGVSMLEAHADLEVVRLRLGKALDYEFHEDYIGGYFSERGPRDTTALLDIERALNKLDK
VAIRLRRKRQRPLVLIVNQLHLLRDNDDGRDLIELLQQRAEQWAAANLVTVVFNSDDYWVYERLKPLATRMDVLA
VGDLPRQQALDALRRYRRRYRGHDPSTAELEAVYSRVGGRLSFLGRVAKSQDMVATCDHIVDTERTWFLNQCWIL
GAEMDDDVMDQQKWASSAMVLAQALVDTDSADDDQDDNYDAAAGHRLPSFALYEAQQIMTRSDFIRRLDSLGLFT
ITSQARVRASSVPMQRALREICALPGFRQHLKDTLQRINDIESLGRTRELVAKDLVLGGRYEVVGPKGDVGTVKL
VQADDGEKKDD
Coding >Ophio5|3072
ATGCGAGGCCTCCGGCTGGCGGCAACGGCCCGCGCTGGCGTTCTTGACCGGCAGTTTCTGGTTCTTCGGCGACGG
CGTGGATTGGCGTCAACTGCGGCCGAAAAGGGGAAAGATGCTGAGCCCTCGCTCCTCGTGCGGATGGGCGAGTCG
GCGGCGACGACGTTCGCGTCCATCTTCGTCCTCGGTCTTGGCTTTGCTACCGCCGGCTTCATCTATCATCGTACC
TATAAGGCCCTCGTGGTGCGCAAGATGACGCGTGCCTTTGAGCCCGGCGACCCCGTGCTGGAGCTGGCGGCCATC
GGGCACGACGTGCCCAACGCACATCGCCGAGGCAACTATGACGACGAGGACGAGGAACACTGGGTCCGGCGTCCC
GAGCAGGAGCATGTCGACGCCATCGTCGCCGGCCGCGAAACCGGCCGCTACCACCTGCTGCTCGGCGACAAGGGC
ACGGGCAAGAGCAGTATGCTGATCGAGGCCATGCACAAGGTCGATGGCGATGGCGTCTCTATGCTCGAGGCCCAT
GCTGACCTCGAGGTCGTTCGGCTGCGGCTGGGAAAGGCGCTCGACTACGAGTTTCACGAGGATTACATCGGTGGC
TACTTTAGCGAGCGAGGGCCGCGCGATACGACGGCGCTGCTTGACATTGAACGTGCCCTTAATAAGCTGGACAAG
GTAGCCATCCGGCTACGGCGGAAGCGCCAGCGGCCGCTCGTCCTCATCGTCAACCAGCTGCATCTGCTGCGTGAC
AACGACGATGGTCGTGATCTCATCGAGTTGCTGCAGCAGCGCGCCGAGCAGTGGGCCGCTGCGAATCTCGTCACC
GTCGTCTTCAACTCGGACGACTACTGGGTCTACGAGAGGCTGAAGCCGCTAGCCACCCGCATGGATGTCCTGGCC
GTCGGCGACCTGCCGCGACAGCAGGCGCTGGACGCGCTGCGACGATACCGCCGTCGCTATCGTGGCCATGACCCG
TCTACGGCCGAGCTCGAGGCCGTATACAGTCGAGTCGGCGGCCGGCTGTCCTTTCTAGGCCGCGTGGCCAAAAGC
CAAGACATGGTGGCGACGTGTGACCACATCGTCGACACAGAACGCACCTGGTTCCTCAACCAGTGCTGGATCCTG
GGCGCCGAAATGGATGACGACGTCATGGACCAGCAGAAGTGGGCGTCGTCAGCCATGGTTCTGGCCCAGGCACTC
GTCGACACCGACTCGGCCGACGACGATCAAGACGACAACTACGACGCCGCGGCCGGCCACCGCCTTCCGTCATTT
GCGCTGTACGAAGCGCAGCAGATCATGACGCGCAGCGACTTCATCCGCCGACTCGACAGCCTCGGCCTCTTCACC
ATCACCAGCCAGGCGAGGGTGAGAGCCAGCAGTGTGCCGATGCAGCGGGCGCTGCGCGAGATCTGCGCCCTTCCC
GGGTTCCGGCAGCACTTGAAAGACACGCTGCAGCGCATTAATGACATTGAGAGCTTGGGCCGTACGCGTGAGCTC
GTCGCCAAGGACTTGGTGCTGGGTGGGCGGTATGAGGTTGTTGGTCCCAAGGGCGACGTTGGCACTGTCAAGCTG
GTGCAGGCCGACGATGGAGAGAAGAAGGATGAT
Transcript >Ophio5|3072
ATGCGAGGCCTCCGGCTGGCGGCAACGGCCCGCGCTGGCGTTCTTGACCGGCAGTTTCTGGTTCTTCGGCGACGG
CGTGGATTGGCGTCAACTGCGGCCGAAAAGGGGAAAGATGCTGAGCCCTCGCTCCTCGTGCGGATGGGCGAGTCG
GCGGCGACGACGTTCGCGTCCATCTTCGTCCTCGGTCTTGGCTTTGCTACCGCCGGCTTCATCTATCATCGTACC
TATAAGGCCCTCGTGGTGCGCAAGATGACGCGTGCCTTTGAGCCCGGCGACCCCGTGCTGGAGCTGGCGGCCATC
GGGCACGACGTGCCCAACGCACATCGCCGAGGCAACTATGACGACGAGGACGAGGAACACTGGGTCCGGCGTCCC
GAGCAGGAGCATGTCGACGCCATCGTCGCCGGCCGCGAAACCGGCCGCTACCACCTGCTGCTCGGCGACAAGGGC
ACGGGCAAGAGCAGTATGCTGATCGAGGCCATGCACAAGGTCGATGGCGATGGCGTCTCTATGCTCGAGGCCCAT
GCTGACCTCGAGGTCGTTCGGCTGCGGCTGGGAAAGGCGCTCGACTACGAGTTTCACGAGGATTACATCGGTGGC
TACTTTAGCGAGCGAGGGCCGCGCGATACGACGGCGCTGCTTGACATTGAACGTGCCCTTAATAAGCTGGACAAG
GTAGCCATCCGGCTACGGCGGAAGCGCCAGCGGCCGCTCGTCCTCATCGTCAACCAGCTGCATCTGCTGCGTGAC
AACGACGATGGTCGTGATCTCATCGAGTTGCTGCAGCAGCGCGCCGAGCAGTGGGCCGCTGCGAATCTCGTCACC
GTCGTCTTCAACTCGGACGACTACTGGGTCTACGAGAGGCTGAAGCCGCTAGCCACCCGCATGGATGTCCTGGCC
GTCGGCGACCTGCCGCGACAGCAGGCGCTGGACGCGCTGCGACGATACCGCCGTCGCTATCGTGGCCATGACCCG
TCTACGGCCGAGCTCGAGGCCGTATACAGTCGAGTCGGCGGCCGGCTGTCCTTTCTAGGCCGCGTGGCCAAAAGC
CAAGACATGGTGGCGACGTGTGACCACATCGTCGACACAGAACGCACCTGGTTCCTCAACCAGTGCTGGATCCTG
GGCGCCGAAATGGATGACGACGTCATGGACCAGCAGAAGTGGGCGTCGTCAGCCATGGTTCTGGCCCAGGCACTC
GTCGACACCGACTCGGCCGACGACGATCAAGACGACAACTACGACGCCGCGGCCGGCCACCGCCTTCCGTCATTT
GCGCTGTACGAAGCGCAGCAGATCATGACGCGCAGCGACTTCATCCGCCGACTCGACAGCCTCGGCCTCTTCACC
ATCACCAGCCAGGCGAGGGTGAGAGCCAGCAGTGTGCCGATGCAGCGGGCGCTGCGCGAGATCTGCGCCCTTCCC
GGGTTCCGGCAGCACTTGAAAGACACGCTGCAGCGCATTAATGACATTGAGAGCTTGGGCCGTACGCGTGAGCTC
GTCGCCAAGGACTTGGTGCTGGGTGGGCGGTATGAGGTTGTTGGTCCCAAGGGCGACGTTGGCACTGTCAAGCTG
GTGCAGGCCGACGATGGAGAGAAGAAGGATGATTAG
Gene >Ophio5|3072
ATGCGAGGCCTCCGGCTGGCGGCAACGGCCCGCGCTGGCGTTCTTGACCGGCAGTTTCTGGTTCTTCGGCGACGG
CGTGGATTGGCGTCAACTGCGGCCGAAAAGGGGAAAGGTGCGTGGTGGCAGGAAGCAAGAAGCGACAAGGAAAAT
TGAATGACAGCGCTGACCGCTACAGCAAGATGCTGAGCCCTCGCTCCTCGTGCGGATGGGCGAGTCGGCGGCGAC
GACGTTCGCGTCCATCTTCGTCCTCGGTCTTGGCTTTGCTACCGCCGGCTTCATCTATCATCGTACCTATAAGGC
CCTCGTGGTGCGCAAGATGACGCGTGCCTTTGAGCCCGGCGACCCCGTGCTGGAGCTGGCGGCCATCGGGCACGA
CGTGCCCAACGCACATCGCCGAGGCAACTATGACGACGAGGACGAGGAACACTGGGTCCGGCGTCCCGAGCAGGA
GCATGTCGACGCCATCGTCGCCGGCCGCGAAACCGGCCGCTACCACCTGCTGCTCGGCGACAAGGGCACGGGCAA
GAGCAGTATGCTGATCGAGGCCATGCACAAGGTCGATGGCGATGGCGTCTCTATGCTCGAGGCCCATGCTGACCT
CGAGGTCGTTCGGCTGCGGCTGGGAAAGGCGCTCGACTACGAGTTTCACGAGGATTACATCGGTGGCTACTTTAG
CGAGCGAGGGCCGCGCGATACGACGGCGCTGCTTGACATTGAACGTGCCCTTAATAAGCTGGACAAGGTAGCCAT
CCGGCTACGGCGGAAGCGCCAGCGGCCGCTCGTCCTCATCGTCAACCAGCTGCATCTGCTGCGTGACAACGACGA
TGGTCGTGATCTCATCGAGTTGCTGCAGCAGCGCGCCGAGCAGTGGGCCGCTGCGAATCTCGTCACCGTCGTCTT
CAACTCGGACGACTACTGGGTCTACGAGAGGCTGAAGCCGCTAGCCACCCGCATGGATGTCCTGGCCGTCGGCGA
CCTGCCGCGACAGCAGGCGCTGGACGCGCTGCGACGATACCGCCGTCGCTATCGTGGCCATGACCCGTCTACGGC
CGAGCTCGAGGCCGTATACAGTCGAGTCGGCGGCCGGCTGTCCTTTCTAGGCCGCGTGGCCAAAAGCCAAGACAT
GGTGGCGACGTGTGACCACATCGTCGACACAGAACGCACCTGGTTCCTCAACCAGTGCTGGATCCTGGGCGCCGA
AATGGATGACGACGTCATGGACCAGCAGAAGTGGGCGTCGTCAGCCATGGTTCTGGCCCAGGCACTCGTCGACAC
CGACTCGGCCGACGACGATCAAGACGACAACTACGACGCCGCGGCCGGCCACCGCCTTCCGTCATTTGCGCTGTA
CGAAGCGCAGCAGATCATGACGCGCAGCGACTTCATCCGCCGACTCGACAGCCTCGGCCTCTTCACCATCACCAG
CCAGGCGAGGGTGAGAGCCAGCAGTGTGCCGATGCAGCGGGCGCTGCGCGAGATCTGCGCCCTTCCCGGGTTCCG
GCAGCACTTGAAAGACACGCTGCAGCGCATTAATGACATTGAGAGCTTGGGCCGTACGCGTGAGCTCGTCGCCAA
GGACTTGGTGCTGGGTGGGCGGTATGAGGTTGTTGGTCCCAAGGGCGACGTTGGCACTGTCAAGCTGGTGCAGGC
CGACGATGGAGAGAAGAAGGATGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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